RNA–Protein interactions for RNA: ENST00000594511.1

XRCC1-204, Transcript of X-ray repair cross complementing 1, humanhuman

TSL 4

Gene XRCC1, Length 571 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-204ENST00000594511 NISCHQ9Y2I1 1504 aa27.11■■□□□ 1.93
XRCC1-204ENST00000594511 CCDC180Q9P1Z9 1646 aa24.02■■□□□ 1.44
XRCC1-204ENST00000594511 ABCC9O60706 1549 aa23.21■■□□□ 1.31
XRCC1-204ENST00000594511 ZCCHC6Q5VYS8 1495 aaKnown RBP22.62■■□□□ 1.21
XRCC1-204ENST00000594511 MYO15BQ96JP2 1530 aa22.57■■□□□ 1.2
XRCC1-204ENST00000594511 NACADO15069 1562 aa22.55■■□□□ 1.2
XRCC1-204ENST00000594511 DCAF1Q9Y4B6 1507 aa22.52■■□□□ 1.2
XRCC1-204ENST00000594511 RB1CC1Q8TDY2 1594 aa22.48■■□□□ 1.19
XRCC1-204ENST00000594511 DCAF8L2P0C7V8 631 aa22.37■■□□□ 1.17
XRCC1-204ENST00000594511 UNC13AQ9UPW8 1703 aa21.97■■□□□ 1.11
XRCC1-204ENST00000594511 BICRAQ9NZM4 1560 aa21.85■■□□□ 1.09
XRCC1-204ENST00000594511 SCRIBQ14160 1630 aa21.8■■□□□ 1.08
XRCC1-204ENST00000594511 PABPN1Q86U42 306 aaKnown RBP eCLIP21.71■■□□□ 1.07
XRCC1-204ENST00000594511 SHROOM4Q9ULL8 1493 aa21.68■■□□□ 1.06
XRCC1-204ENST00000594511 DNAJC5BQ9UF47 199 aa21.24■□□□□ 0.99
XRCC1-204ENST00000594511 EIF4G1Q04637 1599 aaKnown RBP21.2■□□□□ 0.98
XRCC1-204ENST00000594511 CECR2Q9BXF3 1484 aa21.07■□□□□ 0.96
XRCC1-204ENST00000594511 CC2D2AQ9P2K1 1620 aa21.06■□□□□ 0.96
XRCC1-204ENST00000594511 BAZ1AQ9NRL2 1556 aaPredicted RBP20.97■□□□□ 0.95
XRCC1-204ENST00000594511 SMARCA4P51532 1647 aa20.96■□□□□ 0.95
XRCC1-204ENST00000594511 MROH2BQ7Z745 1585 aa20.86■□□□□ 0.93
XRCC1-204ENST00000594511 PEG3Q9GZU2 1588 aa20.85■□□□□ 0.93
XRCC1-204ENST00000594511 NCAPD3P42695 1498 aa20.84■□□□□ 0.93
XRCC1-204ENST00000594511 ATAD2BQ9ULI0 1458 aa20.83■□□□□ 0.93
XRCC1-204ENST00000594511 SMARCA2P51531 1590 aa20.8■□□□□ 0.92
XRCC1-204ENST00000594511 RSF1Q96T23 1441 aaPredicted RBP20.72■□□□□ 0.91
XRCC1-204ENST00000594511 HMGXB3Q12766 1538 aa20.72■□□□□ 0.91
XRCC1-204ENST00000594511 WIZO95785 1651 aa20.61■□□□□ 0.89
XRCC1-204ENST00000594511 BAZ1BQ9UIG0 1483 aaKnown RBP20.6■□□□□ 0.89
XRCC1-204ENST00000594511 TOP2AP11388 1531 aaKnown RBP20.44■□□□□ 0.86
XRCC1-204ENST00000594511 CCDC88BA6NC98 1476 aa20.21■□□□□ 0.83
XRCC1-204ENST00000594511 LAMC3Q9Y6N6 1575 aa20.21■□□□□ 0.83
XRCC1-204ENST00000594511 CADPSQ9ULU8 1353 aa20.21■□□□□ 0.83
XRCC1-204ENST00000594511 SUPT5HO00267 1087 aaKnown RBP20.17■□□□□ 0.82
XRCC1-204ENST00000594511 NESP48681 1621 aa20.16■□□□□ 0.82
XRCC1-204ENST00000594511 CFTRP13569 1480 aa20.13■□□□□ 0.81
XRCC1-204ENST00000594511 PDS5BQ9NTI5 1447 aa20.04■□□□□ 0.8
XRCC1-204ENST00000594511 ERCC6Q03468 1493 aa19.95■□□□□ 0.78
XRCC1-204ENST00000594511 PRDM2Q13029 1718 aa19.95■□□□□ 0.78
XRCC1-204ENST00000594511 KIF21AQ7Z4S6 1674 aa19.92■□□□□ 0.78
XRCC1-204ENST00000594511 FANCD2Q9BXW9 1451 aa19.92■□□□□ 0.78
XRCC1-204ENST00000594511 THOC2Q8NI27 1593 aaKnown RBP19.87■□□□□ 0.77
XRCC1-204ENST00000594511 CEP164Q9UPV0 1460 aa19.86■□□□□ 0.77
XRCC1-204ENST00000594511 MRC2Q9UBG0 1479 aa19.81■□□□□ 0.76
XRCC1-204ENST00000594511 CUX2O14529 1486 aa19.8■□□□□ 0.76
XRCC1-204ENST00000594511 WDR62O43379 1518 aa19.77■□□□□ 0.76
XRCC1-204ENST00000594511 URB2Q14146 1524 aaKnown RBP19.72■□□□□ 0.75
XRCC1-204ENST00000594511 ABCC8Q09428 1581 aa19.69■□□□□ 0.74
XRCC1-204ENST00000594511 TOPBP1Q92547 1522 aa19.64■□□□□ 0.73
XRCC1-204ENST00000594511 DNMBPQ6XZF7 1577 aa19.62■□□□□ 0.73
XRCC1-204ENST00000594511 CUX1P39880 1505 aa19.56■□□□□ 0.72
XRCC1-204ENST00000594511 WRNQ14191 1432 aaPredicted RBP eCLIP19.49■□□□□ 0.71
XRCC1-204ENST00000594511 POLA1P09884 1462 aaPredicted RBP19.48■□□□□ 0.71
XRCC1-204ENST00000594511 IFT140Q96RY7 1462 aa19.48■□□□□ 0.71
XRCC1-204ENST00000594511 TOP2BQ02880 1626 aa19.45■□□□□ 0.7
XRCC1-204ENST00000594511 BIVM-ERCC5R4GMW8 1640 aa19.45■□□□□ 0.7
XRCC1-204ENST00000594511 TARBP1Q13395 1621 aaKnown RBP19.43■□□□□ 0.7
XRCC1-204ENST00000594511 FGD5Q6ZNL6 1462 aa19.43■□□□□ 0.7
XRCC1-204ENST00000594511 SYNJ1O43426 1573 aa19.42■□□□□ 0.7
XRCC1-204ENST00000594511 SOGA1O94964 1423 aa19.41■□□□□ 0.7
XRCC1-204ENST00000594511 RAD54L2Q9Y4B4 1467 aa19.36■□□□□ 0.69
XRCC1-204ENST00000594511 ZNF608Q9ULD9 1512 aaPredicted RBP19.34■□□□□ 0.69
XRCC1-204ENST00000594511 WDR97A6NE52 1622 aa19.33■□□□□ 0.68
XRCC1-204ENST00000594511 ABCA10Q8WWZ4 1543 aa19.32■□□□□ 0.68
XRCC1-204ENST00000594511 EIF4G3O43432 1585 aaKnown RBP19.25■□□□□ 0.67
XRCC1-204ENST00000594511 AQRO60306 1485 aaKnown RBP eCLIP19.25■□□□□ 0.67
XRCC1-204ENST00000594511 TDRD9Q8NDG6 1382 aaKnown RBP19.23■□□□□ 0.67
XRCC1-204ENST00000594511 ABCA5Q8WWZ7 1642 aa19.2■□□□□ 0.66
XRCC1-204ENST00000594511 GAPVD1Q14C86 1478 aa19.17■□□□□ 0.66
XRCC1-204ENST00000594511 GRIN2BQ13224 1484 aa19.16■□□□□ 0.66
XRCC1-204ENST00000594511 MAGI1Q96QZ7 1491 aaPredicted RBP19.1■□□□□ 0.65
XRCC1-204ENST00000594511 TRIM41Q8WV44 630 aa19.1■□□□□ 0.65
XRCC1-204ENST00000594511 PBRM1Q86U86 1689 aa19.08■□□□□ 0.65
XRCC1-204ENST00000594511 ERICH3Q5RHP9 1530 aa19.08■□□□□ 0.64
XRCC1-204ENST00000594511 KIF27Q86VH2 1401 aa19.07■□□□□ 0.64
XRCC1-204ENST00000594511 SNAPC4Q5SXM2 1469 aa19.06■□□□□ 0.64
XRCC1-204ENST00000594511 CHIC1Q5VXU3 224 aa19.06■□□□□ 0.64
XRCC1-204ENST00000594511 IGF1RP08069 1367 aa19.03■□□□□ 0.64
XRCC1-204ENST00000594511 SYNJ2O15056 1496 aa19.01■□□□□ 0.63
XRCC1-204ENST00000594511 DNAJC5Q9H3Z4 198 aa19■□□□□ 0.63
XRCC1-204ENST00000594511 OSCARQ8IYS5 282 aa18.99■□□□□ 0.63
XRCC1-204ENST00000594511 FHAD1B1AJZ9 1412 aa18.98■□□□□ 0.63
XRCC1-204ENST00000594511 ADAMTS12P58397 1594 aa18.98■□□□□ 0.63
XRCC1-204ENST00000594511 CHD1O14646 1710 aa18.96■□□□□ 0.63
XRCC1-204ENST00000594511 RUSC2Q8N2Y8 1516 aa18.95■□□□□ 0.62
XRCC1-204ENST00000594511 CHMP7Q8WUX9 453 aaPredicted RBP18.93■□□□□ 0.62
XRCC1-204ENST00000594511 CUL7Q14999 1698 aa18.91■□□□□ 0.62
XRCC1-204ENST00000594511 GRIN2AQ12879 1464 aa18.9■□□□□ 0.62
XRCC1-204ENST00000594511 FBLN2P98095 1184 aa18.87■□□□□ 0.61
XRCC1-204ENST00000594511 EEA1Q15075 1411 aa18.87■□□□□ 0.61
XRCC1-204ENST00000594511 CARMIL1Q5VZK9 1371 aa18.87■□□□□ 0.61
XRCC1-204ENST00000594511 NUP160Q12769 1436 aa18.86■□□□□ 0.61
XRCC1-204ENST00000594511 CLASP1Q7Z460 1538 aa18.84■□□□□ 0.61
XRCC1-204ENST00000594511 PRXQ9BXM0 1461 aa18.81■□□□□ 0.6
XRCC1-204ENST00000594511 CEP170Q5SW79 1584 aa18.8■□□□□ 0.6
XRCC1-204ENST00000594511 CSRNP3Q8WYN3 585 aa18.79■□□□□ 0.6
XRCC1-204ENST00000594511 RAPGEF2Q9Y4G8 1499 aa18.77■□□□□ 0.6
XRCC1-204ENST00000594511 KIAA0586Q9BVV6 1533 aa18.71■□□□□ 0.59
XRCC1-204ENST00000594511 SHROOM2Q13796 1616 aa18.7■□□□□ 0.58
XRCC1-204ENST00000594511 ARHGEF11O15085 1522 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms