RNA–Protein interactions for RNA: ENST00000594448.5

LTBP4-210, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

TSL 5

Gene LTBP4, Length 573 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-210ENST00000594448 NISCHQ9Y2I1 1504 aa36.03■■■■□ 3.36
LTBP4-210ENST00000594448 CCDC180Q9P1Z9 1646 aa32.02■■■□□ 2.72
LTBP4-210ENST00000594448 ABCC9O60706 1549 aa31.38■■■□□ 2.61
LTBP4-210ENST00000594448 DCAF8L2P0C7V8 631 aa30.27■■■□□ 2.44
LTBP4-210ENST00000594448 RB1CC1Q8TDY2 1594 aa30.2■■■□□ 2.42
LTBP4-210ENST00000594448 NACADO15069 1562 aa30.15■■■□□ 2.42
LTBP4-210ENST00000594448 ZCCHC6Q5VYS8 1495 aaKnown RBP30.01■■■□□ 2.4
LTBP4-210ENST00000594448 MYO15BQ96JP2 1530 aa29.94■■■□□ 2.38
LTBP4-210ENST00000594448 DCAF1Q9Y4B6 1507 aa29.81■■■□□ 2.36
LTBP4-210ENST00000594448 UNC13AQ9UPW8 1703 aa29.34■■■□□ 2.29
LTBP4-210ENST00000594448 PABPN1Q86U42 306 aaKnown RBP eCLIP29.34■■■□□ 2.29
LTBP4-210ENST00000594448 SCRIBQ14160 1630 aa29.25■■■□□ 2.27
LTBP4-210ENST00000594448 BICRAQ9NZM4 1560 aa29.15■■■□□ 2.26
LTBP4-210ENST00000594448 SHROOM4Q9ULL8 1493 aa28.97■■■□□ 2.23
LTBP4-210ENST00000594448 DNAJC5BQ9UF47 199 aa28.69■■■□□ 2.18
LTBP4-210ENST00000594448 EIF4G1Q04637 1599 aaKnown RBP28.45■■■□□ 2.15
LTBP4-210ENST00000594448 CC2D2AQ9P2K1 1620 aa28.34■■■□□ 2.13
LTBP4-210ENST00000594448 CECR2Q9BXF3 1484 aa28.21■■■□□ 2.11
LTBP4-210ENST00000594448 BAZ1AQ9NRL2 1556 aaPredicted RBP27.97■■■□□ 2.07
LTBP4-210ENST00000594448 SMARCA4P51532 1647 aa27.95■■■□□ 2.06
LTBP4-210ENST00000594448 SMARCA2P51531 1590 aa27.83■■■□□ 2.05
LTBP4-210ENST00000594448 ATAD2BQ9ULI0 1458 aa27.82■■■□□ 2.04
LTBP4-210ENST00000594448 NCAPD3P42695 1498 aa27.8■■■□□ 2.04
LTBP4-210ENST00000594448 MROH2BQ7Z745 1585 aa27.75■■■□□ 2.03
LTBP4-210ENST00000594448 HMGXB3Q12766 1538 aa27.67■■■□□ 2.02
LTBP4-210ENST00000594448 PEG3Q9GZU2 1588 aa27.65■■■□□ 2.02
LTBP4-210ENST00000594448 BAZ1BQ9UIG0 1483 aaKnown RBP27.64■■■□□ 2.02
LTBP4-210ENST00000594448 RSF1Q96T23 1441 aaPredicted RBP27.46■■□□□ 1.99
LTBP4-210ENST00000594448 WIZO95785 1651 aa27.45■■□□□ 1.98
LTBP4-210ENST00000594448 TOP2AP11388 1531 aaKnown RBP27.21■■□□□ 1.95
LTBP4-210ENST00000594448 ERCC6Q03468 1493 aa27.13■■□□□ 1.93
LTBP4-210ENST00000594448 NESP48681 1621 aa27.1■■□□□ 1.93
LTBP4-210ENST00000594448 LAMC3Q9Y6N6 1575 aa27.08■■□□□ 1.93
LTBP4-210ENST00000594448 CADPSQ9ULU8 1353 aa27.03■■□□□ 1.92
LTBP4-210ENST00000594448 PDS5BQ9NTI5 1447 aa26.97■■□□□ 1.91
LTBP4-210ENST00000594448 SUPT5HO00267 1087 aaKnown RBP26.91■■□□□ 1.9
LTBP4-210ENST00000594448 CCDC88BA6NC98 1476 aa26.87■■□□□ 1.89
LTBP4-210ENST00000594448 CFTRP13569 1480 aa26.83■■□□□ 1.89
LTBP4-210ENST00000594448 CUX2O14529 1486 aa26.77■■□□□ 1.88
LTBP4-210ENST00000594448 KIF21AQ7Z4S6 1674 aa26.76■■□□□ 1.87
LTBP4-210ENST00000594448 FANCD2Q9BXW9 1451 aa26.72■■□□□ 1.87
LTBP4-210ENST00000594448 CEP164Q9UPV0 1460 aa26.71■■□□□ 1.87
LTBP4-210ENST00000594448 THOC2Q8NI27 1593 aaKnown RBP26.67■■□□□ 1.86
LTBP4-210ENST00000594448 MRC2Q9UBG0 1479 aa26.65■■□□□ 1.86
LTBP4-210ENST00000594448 PRDM2Q13029 1718 aa26.58■■□□□ 1.85
LTBP4-210ENST00000594448 WDR62O43379 1518 aa26.51■■□□□ 1.83
LTBP4-210ENST00000594448 URB2Q14146 1524 aaKnown RBP26.39■■□□□ 1.81
LTBP4-210ENST00000594448 ABCC8Q09428 1581 aa26.33■■□□□ 1.8
LTBP4-210ENST00000594448 TOPBP1Q92547 1522 aa26.27■■□□□ 1.8
LTBP4-210ENST00000594448 DNMBPQ6XZF7 1577 aa26.24■■□□□ 1.79
LTBP4-210ENST00000594448 IFT140Q96RY7 1462 aa26.14■■□□□ 1.78
LTBP4-210ENST00000594448 POLA1P09884 1462 aaPredicted RBP26.04■■□□□ 1.76
LTBP4-210ENST00000594448 CUX1P39880 1505 aa26.04■■□□□ 1.76
LTBP4-210ENST00000594448 FGD5Q6ZNL6 1462 aa25.99■■□□□ 1.75
LTBP4-210ENST00000594448 SOGA1O94964 1423 aa25.99■■□□□ 1.75
LTBP4-210ENST00000594448 WRNQ14191 1432 aaPredicted RBP eCLIP25.96■■□□□ 1.75
LTBP4-210ENST00000594448 ZNF608Q9ULD9 1512 aaPredicted RBP25.95■■□□□ 1.74
LTBP4-210ENST00000594448 RAD54L2Q9Y4B4 1467 aa25.92■■□□□ 1.74
LTBP4-210ENST00000594448 DNAJC5Q9H3Z4 198 aa25.92■■□□□ 1.74
LTBP4-210ENST00000594448 TARBP1Q13395 1621 aaKnown RBP25.92■■□□□ 1.74
LTBP4-210ENST00000594448 EIF4G3O43432 1585 aaKnown RBP25.86■■□□□ 1.73
LTBP4-210ENST00000594448 AQRO60306 1485 aaKnown RBP eCLIP25.85■■□□□ 1.731e-8■■□□□ 14.1
LTBP4-210ENST00000594448 TOP2BQ02880 1626 aa25.83■■□□□ 1.73
LTBP4-210ENST00000594448 TDRD9Q8NDG6 1382 aaKnown RBP25.82■■□□□ 1.72
LTBP4-210ENST00000594448 BIVM-ERCC5R4GMW8 1640 aa25.81■■□□□ 1.72
LTBP4-210ENST00000594448 SYNJ1O43426 1573 aa25.8■■□□□ 1.72
LTBP4-210ENST00000594448 WDR97A6NE52 1622 aa25.79■■□□□ 1.72
LTBP4-210ENST00000594448 ABCA10Q8WWZ4 1543 aa25.73■■□□□ 1.71
LTBP4-210ENST00000594448 OSCARQ8IYS5 282 aa25.72■■□□□ 1.71
LTBP4-210ENST00000594448 GRIN2BQ13224 1484 aa25.68■■□□□ 1.7
LTBP4-210ENST00000594448 GAPVD1Q14C86 1478 aa25.67■■□□□ 1.7
LTBP4-210ENST00000594448 FBLN2P98095 1184 aa25.66■■□□□ 1.7
LTBP4-210ENST00000594448 SNAPC4Q5SXM2 1469 aa25.62■■□□□ 1.69
LTBP4-210ENST00000594448 MAGI1Q96QZ7 1491 aaPredicted RBP25.6■■□□□ 1.69
LTBP4-210ENST00000594448 ABCA5Q8WWZ7 1642 aa25.59■■□□□ 1.69
LTBP4-210ENST00000594448 CHMP7Q8WUX9 453 aaPredicted RBP25.57■■□□□ 1.68
LTBP4-210ENST00000594448 PBRM1Q86U86 1689 aa25.55■■□□□ 1.68
LTBP4-210ENST00000594448 CHD1O14646 1710 aa25.5■■□□□ 1.67
LTBP4-210ENST00000594448 SYNJ2O15056 1496 aa25.5■■□□□ 1.67
LTBP4-210ENST00000594448 KIF27Q86VH2 1401 aa25.45■■□□□ 1.66
LTBP4-210ENST00000594448 ERICH3Q5RHP9 1530 aa25.44■■□□□ 1.66
LTBP4-210ENST00000594448 TRIM41Q8WV44 630 aa25.43■■□□□ 1.66
LTBP4-210ENST00000594448 FHAD1B1AJZ9 1412 aa25.38■■□□□ 1.65
LTBP4-210ENST00000594448 ADAMTS12P58397 1594 aa25.37■■□□□ 1.65
LTBP4-210ENST00000594448 GRIN2AQ12879 1464 aa25.32■■□□□ 1.64
LTBP4-210ENST00000594448 IGF1RP08069 1367 aa25.27■■□□□ 1.64
LTBP4-210ENST00000594448 CLASP1Q7Z460 1538 aa25.23■■□□□ 1.63
LTBP4-210ENST00000594448 ARHGEF11O15085 1522 aa25.22■■□□□ 1.63
LTBP4-210ENST00000594448 CUL7Q14999 1698 aa25.22■■□□□ 1.63
LTBP4-210ENST00000594448 RIMBP3CA6NJZ7 1639 aa25.19■■□□□ 1.62
LTBP4-210ENST00000594448 RIMBP3BA6NNM3 1639 aa25.19■■□□□ 1.62
LTBP4-210ENST00000594448 RIMBP3Q9UFD9 1639 aa25.19■■□□□ 1.62
LTBP4-210ENST00000594448 NUP160Q12769 1436 aa25.18■■□□□ 1.62
LTBP4-210ENST00000594448 CARMIL1Q5VZK9 1371 aa25.17■■□□□ 1.62
LTBP4-210ENST00000594448 CEP170Q5SW79 1584 aa25.14■■□□□ 1.62
LTBP4-210ENST00000594448 RUSC2Q8N2Y8 1516 aa25.1■■□□□ 1.61
LTBP4-210ENST00000594448 CYB5RLQ6IPT4 315 aa25.06■■□□□ 1.6
LTBP4-210ENST00000594448 CHIC1Q5VXU3 224 aa25.04■■□□□ 1.6
LTBP4-210ENST00000594448 RAPGEF2Q9Y4G8 1499 aa25.02■■□□□ 1.6
LTBP4-210ENST00000594448 JPH4Q96JJ6 628 aa25■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms