RNA–Protein interactions for RNA: ENST00000594417.1

ARHGEF1-208, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene ARHGEF1, Length 769 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-208ENST00000594417 NISCHQ9Y2I1 1504 aa34.12■■■■□ 3.05
ARHGEF1-208ENST00000594417 ABCC9O60706 1549 aa30.4■■■□□ 2.46
ARHGEF1-208ENST00000594417 CCDC180Q9P1Z9 1646 aa30.36■■■□□ 2.45
ARHGEF1-208ENST00000594417 DCAF8L2P0C7V8 631 aa29.03■■■□□ 2.24
ARHGEF1-208ENST00000594417 RB1CC1Q8TDY2 1594 aa28.95■■■□□ 2.22
ARHGEF1-208ENST00000594417 NACADO15069 1562 aa28.79■■■□□ 2.2
ARHGEF1-208ENST00000594417 PABPN1Q86U42 306 aaKnown RBP eCLIP28.46■■■□□ 2.15
ARHGEF1-208ENST00000594417 MYO15BQ96JP2 1530 aa28.44■■■□□ 2.14
ARHGEF1-208ENST00000594417 DNAJC5BQ9UF47 199 aa28.38■■■□□ 2.13
ARHGEF1-208ENST00000594417 ZCCHC6Q5VYS8 1495 aaKnown RBP28.27■■■□□ 2.12
ARHGEF1-208ENST00000594417 DCAF1Q9Y4B6 1507 aa28.15■■■□□ 2.1
ARHGEF1-208ENST00000594417 UNC13AQ9UPW8 1703 aa28.03■■■□□ 2.08
ARHGEF1-208ENST00000594417 BICRAQ9NZM4 1560 aa28.01■■■□□ 2.07
ARHGEF1-208ENST00000594417 SCRIBQ14160 1630 aa27.81■■■□□ 2.04
ARHGEF1-208ENST00000594417 SHROOM4Q9ULL8 1493 aa27.71■■■□□ 2.03
ARHGEF1-208ENST00000594417 CECR2Q9BXF3 1484 aa27.37■■□□□ 1.97
ARHGEF1-208ENST00000594417 EIF4G1Q04637 1599 aaKnown RBP27.36■■□□□ 1.97
ARHGEF1-208ENST00000594417 CC2D2AQ9P2K1 1620 aa27.36■■□□□ 1.97
ARHGEF1-208ENST00000594417 NCAPD3P42695 1498 aa26.64■■□□□ 1.86
ARHGEF1-208ENST00000594417 ATAD2BQ9ULI0 1458 aa26.58■■□□□ 1.85
ARHGEF1-208ENST00000594417 SMARCA4P51532 1647 aa26.5■■□□□ 1.83
ARHGEF1-208ENST00000594417 SMARCA2P51531 1590 aa26.49■■□□□ 1.83
ARHGEF1-208ENST00000594417 BAZ1AQ9NRL2 1556 aaPredicted RBP26.47■■□□□ 1.83
ARHGEF1-208ENST00000594417 HMGXB3Q12766 1538 aa26.36■■□□□ 1.81
ARHGEF1-208ENST00000594417 BAZ1BQ9UIG0 1483 aaKnown RBP26.36■■□□□ 1.81
ARHGEF1-208ENST00000594417 MROH2BQ7Z745 1585 aa26.29■■□□□ 1.8
ARHGEF1-208ENST00000594417 ERCC6Q03468 1493 aa26.28■■□□□ 1.8
ARHGEF1-208ENST00000594417 PEG3Q9GZU2 1588 aa26.22■■□□□ 1.79
ARHGEF1-208ENST00000594417 NESP48681 1621 aa26.13■■□□□ 1.77
ARHGEF1-208ENST00000594417 CUX2O14529 1486 aa26.08■■□□□ 1.77
ARHGEF1-208ENST00000594417 DNAJC5Q9H3Z4 198 aa25.96■■□□□ 1.75
ARHGEF1-208ENST00000594417 LAMC3Q9Y6N6 1575 aa25.93■■□□□ 1.74
ARHGEF1-208ENST00000594417 PDS5BQ9NTI5 1447 aa25.92■■□□□ 1.74
ARHGEF1-208ENST00000594417 WIZO95785 1651 aa25.92■■□□□ 1.74
ARHGEF1-208ENST00000594417 CADPSQ9ULU8 1353 aa25.9■■□□□ 1.74
ARHGEF1-208ENST00000594417 RSF1Q96T23 1441 aaPredicted RBP25.88■■□□□ 1.73
ARHGEF1-208ENST00000594417 THOC2Q8NI27 1593 aaKnown RBP25.69■■□□□ 1.7
ARHGEF1-208ENST00000594417 TOP2AP11388 1531 aaKnown RBP25.65■■□□□ 1.7
ARHGEF1-208ENST00000594417 KIF21AQ7Z4S6 1674 aa25.64■■□□□ 1.69
ARHGEF1-208ENST00000594417 MRC2Q9UBG0 1479 aa25.6■■□□□ 1.69
ARHGEF1-208ENST00000594417 CFTRP13569 1480 aa25.58■■□□□ 1.69
ARHGEF1-208ENST00000594417 FANCD2Q9BXW9 1451 aa25.56■■□□□ 1.68
ARHGEF1-208ENST00000594417 CEP164Q9UPV0 1460 aa25.55■■□□□ 1.68
ARHGEF1-208ENST00000594417 WDR62O43379 1518 aa25.46■■□□□ 1.67
ARHGEF1-208ENST00000594417 CCDC88BA6NC98 1476 aa25.43■■□□□ 1.66
ARHGEF1-208ENST00000594417 URB2Q14146 1524 aaKnown RBP25.28■■□□□ 1.64
ARHGEF1-208ENST00000594417 OSCARQ8IYS5 282 aa25.1■■□□□ 1.61
ARHGEF1-208ENST00000594417 SUPT5HO00267 1087 aaKnown RBP25.08■■□□□ 1.61
ARHGEF1-208ENST00000594417 ABCC8Q09428 1581 aa25.07■■□□□ 1.6
ARHGEF1-208ENST00000594417 TOPBP1Q92547 1522 aa25.06■■□□□ 1.6
ARHGEF1-208ENST00000594417 IFT140Q96RY7 1462 aa25.05■■□□□ 1.6
ARHGEF1-208ENST00000594417 PRDM2Q13029 1718 aa25.05■■□□□ 1.6
ARHGEF1-208ENST00000594417 TRIM41Q8WV44 630 aa24.99■■□□□ 1.59
ARHGEF1-208ENST00000594417 ZNF608Q9ULD9 1512 aaPredicted RBP24.96■■□□□ 1.59
ARHGEF1-208ENST00000594417 DNMBPQ6XZF7 1577 aa24.94■■□□□ 1.58
ARHGEF1-208ENST00000594417 AQRO60306 1485 aaKnown RBP eCLIP24.83■■□□□ 1.56
ARHGEF1-208ENST00000594417 SOGA1O94964 1423 aa24.82■■□□□ 1.56
ARHGEF1-208ENST00000594417 POLA1P09884 1462 aaPredicted RBP24.82■■□□□ 1.56
ARHGEF1-208ENST00000594417 FBLN2P98095 1184 aa24.78■■□□□ 1.56
ARHGEF1-208ENST00000594417 RAD54L2Q9Y4B4 1467 aa24.77■■□□□ 1.56
ARHGEF1-208ENST00000594417 TDRD9Q8NDG6 1382 aaKnown RBP24.75■■□□□ 1.55
ARHGEF1-208ENST00000594417 TARBP1Q13395 1621 aaKnown RBP24.73■■□□□ 1.55
ARHGEF1-208ENST00000594417 EIF4G3O43432 1585 aaKnown RBP24.73■■□□□ 1.55
ARHGEF1-208ENST00000594417 FGD5Q6ZNL6 1462 aa24.7■■□□□ 1.55
ARHGEF1-208ENST00000594417 CUX1P39880 1505 aa24.68■■□□□ 1.54
ARHGEF1-208ENST00000594417 CHMP7Q8WUX9 453 aaPredicted RBP24.6■■□□□ 1.53
ARHGEF1-208ENST00000594417 SNAPC4Q5SXM2 1469 aa24.53■■□□□ 1.52
ARHGEF1-208ENST00000594417 GRIN2BQ13224 1484 aa24.52■■□□□ 1.52
ARHGEF1-208ENST00000594417 CYB5RLQ6IPT4 315 aa24.51■■□□□ 1.51
ARHGEF1-208ENST00000594417 ARHGEF11O15085 1522 aa24.51■■□□□ 1.51
ARHGEF1-208ENST00000594417 WDR97A6NE52 1622 aa24.5■■□□□ 1.51
ARHGEF1-208ENST00000594417 RIMBP3CA6NJZ7 1639 aa24.5■■□□□ 1.51
ARHGEF1-208ENST00000594417 RIMBP3BA6NNM3 1639 aa24.5■■□□□ 1.51
ARHGEF1-208ENST00000594417 RIMBP3Q9UFD9 1639 aa24.5■■□□□ 1.51
ARHGEF1-208ENST00000594417 WRNQ14191 1432 aaPredicted RBP eCLIP24.47■■□□□ 1.51
ARHGEF1-208ENST00000594417 GAPVD1Q14C86 1478 aa24.46■■□□□ 1.51
ARHGEF1-208ENST00000594417 MAGI1Q96QZ7 1491 aaPredicted RBP24.46■■□□□ 1.51
ARHGEF1-208ENST00000594417 CHD1O14646 1710 aa24.44■■□□□ 1.5
ARHGEF1-208ENST00000594417 ABCA10Q8WWZ4 1543 aa24.42■■□□□ 1.5
ARHGEF1-208ENST00000594417 SYNJ2O15056 1496 aa24.39■■□□□ 1.5
ARHGEF1-208ENST00000594417 SYNJ1O43426 1573 aa24.32■■□□□ 1.48
ARHGEF1-208ENST00000594417 TOP2BQ02880 1626 aa24.3■■□□□ 1.48
ARHGEF1-208ENST00000594417 ARAP1Q96P48 1450 aa24.27■■□□□ 1.48
ARHGEF1-208ENST00000594417 ABCA5Q8WWZ7 1642 aa24.26■■□□□ 1.47
ARHGEF1-208ENST00000594417 CLASP1Q7Z460 1538 aa24.25■■□□□ 1.47
ARHGEF1-208ENST00000594417 BIVM-ERCC5R4GMW8 1640 aa24.24■■□□□ 1.47
ARHGEF1-208ENST00000594417 PBRM1Q86U86 1689 aa24.23■■□□□ 1.47
ARHGEF1-208ENST00000594417 TRHP20396 242 aaPredicted RBP24.22■■□□□ 1.47
ARHGEF1-208ENST00000594417 FHAD1B1AJZ9 1412 aa24.18■■□□□ 1.46
ARHGEF1-208ENST00000594417 GRIN2AQ12879 1464 aa24.17■■□□□ 1.46
ARHGEF1-208ENST00000594417 ERICH3Q5RHP9 1530 aa24.1■■□□□ 1.45
ARHGEF1-208ENST00000594417 ADAMTS12P58397 1594 aa24.09■■□□□ 1.45
ARHGEF1-208ENST00000594417 NUP160Q12769 1436 aa24.07■■□□□ 1.44
ARHGEF1-208ENST00000594417 CEP170Q5SW79 1584 aa24■■□□□ 1.43
ARHGEF1-208ENST00000594417 KIF27Q86VH2 1401 aa24■■□□□ 1.43
ARHGEF1-208ENST00000594417 JPH4Q96JJ6 628 aa23.99■■□□□ 1.43
ARHGEF1-208ENST00000594417 IGF1RP08069 1367 aa23.97■■□□□ 1.43
ARHGEF1-208ENST00000594417 PRG4Q92954 1404 aaPredicted RBP23.92■■□□□ 1.42
ARHGEF1-208ENST00000594417 ERCC6L2Q5T890 1561 aa23.91■■□□□ 1.42
ARHGEF1-208ENST00000594417 CARMIL1Q5VZK9 1371 aa23.83■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms