RNA–Protein interactions for RNA: ENST00000593886.1

ZNF43-204, Transcript of zinc finger protein 43, humanhuman

Gene ZNF43, Length 2,051 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF43-204ENST00000593886 NISCHQ9Y2I1 1504 aa15.4■□□□□ 0.06
ZNF43-204ENST00000593886 CCDC180Q9P1Z9 1646 aa13.57□□□□□ -0.24
ZNF43-204ENST00000593886 ZCCHC6Q5VYS8 1495 aaKnown RBP12.91□□□□□ -0.34
ZNF43-204ENST00000593886 ABCC9O60706 1549 aa12.85□□□□□ -0.35
ZNF43-204ENST00000593886 DCAF1Q9Y4B6 1507 aa12.77□□□□□ -0.37
ZNF43-204ENST00000593886 DCAF8L2P0C7V8 631 aa12.68□□□□□ -0.38
ZNF43-204ENST00000593886 MYO15BQ96JP2 1530 aa12.67□□□□□ -0.38
ZNF43-204ENST00000593886 NACADO15069 1562 aa12.63□□□□□ -0.39
ZNF43-204ENST00000593886 RB1CC1Q8TDY2 1594 aa12.56□□□□□ -0.4
ZNF43-204ENST00000593886 DNAJC5Q9H3Z4 198 aa12.55□□□□□ -0.4
ZNF43-204ENST00000593886 SCRIBQ14160 1630 aa12.39□□□□□ -0.43
ZNF43-204ENST00000593886 SHROOM4Q9ULL8 1493 aa12.39□□□□□ -0.43
ZNF43-204ENST00000593886 UNC13AQ9UPW8 1703 aa12.34□□□□□ -0.43
ZNF43-204ENST00000593886 BICRAQ9NZM4 1560 aa12.16□□□□□ -0.46
ZNF43-204ENST00000593886 PABPN1Q86U42 306 aaKnown RBP eCLIP12.04□□□□□ -0.48
ZNF43-204ENST00000593886 CECR2Q9BXF3 1484 aa11.93□□□□□ -0.5
ZNF43-204ENST00000593886 BAZ1AQ9NRL2 1556 aaPredicted RBP11.92□□□□□ -0.5
ZNF43-204ENST00000593886 SMARCA4P51532 1647 aa11.89□□□□□ -0.51
ZNF43-204ENST00000593886 MROH2BQ7Z745 1585 aa11.87□□□□□ -0.51
ZNF43-204ENST00000593886 DNAJC5BQ9UF47 199 aa11.87□□□□□ -0.51
ZNF43-204ENST00000593886 RSF1Q96T23 1441 aaPredicted RBP11.86□□□□□ -0.51
ZNF43-204ENST00000593886 SUPT5HO00267 1087 aaKnown RBP11.84□□□□□ -0.51
ZNF43-204ENST00000593886 EIF4G1Q04637 1599 aaKnown RBP11.8□□□□□ -0.52
ZNF43-204ENST00000593886 WIZO95785 1651 aa11.79□□□□□ -0.52
ZNF43-204ENST00000593886 PEG3Q9GZU2 1588 aa11.75□□□□□ -0.53
ZNF43-204ENST00000593886 SMARCA2P51531 1590 aa11.72□□□□□ -0.53
ZNF43-204ENST00000593886 ATAD2BQ9ULI0 1458 aa11.7□□□□□ -0.54
ZNF43-204ENST00000593886 TOP2AP11388 1531 aaKnown RBP11.68□□□□□ -0.54
ZNF43-204ENST00000593886 CC2D2AQ9P2K1 1620 aa11.67□□□□□ -0.54
ZNF43-204ENST00000593886 BAZ1BQ9UIG0 1483 aaKnown RBP11.63□□□□□ -0.55
ZNF43-204ENST00000593886 HMGXB3Q12766 1538 aa11.63□□□□□ -0.55
ZNF43-204ENST00000593886 NCAPD3P42695 1498 aa11.62□□□□□ -0.55
ZNF43-204ENST00000593886 CCDC88BA6NC98 1476 aa11.52□□□□□ -0.57
ZNF43-204ENST00000593886 PRDM2Q13029 1718 aa11.37□□□□□ -0.59
ZNF43-204ENST00000593886 CFTRP13569 1480 aa11.32□□□□□ -0.6
ZNF43-204ENST00000593886 CADPSQ9ULU8 1353 aa11.3□□□□□ -0.6
ZNF43-204ENST00000593886 LAMC3Q9Y6N6 1575 aa11.29□□□□□ -0.6
ZNF43-204ENST00000593886 CHIC1Q5VXU3 224 aa11.28□□□□□ -0.6
ZNF43-204ENST00000593886 NESP48681 1621 aa11.23□□□□□ -0.61
ZNF43-204ENST00000593886 ABCC8Q09428 1581 aa11.23□□□□□ -0.61
ZNF43-204ENST00000593886 FANCD2Q9BXW9 1451 aa11.19□□□□□ -0.62
ZNF43-204ENST00000593886 WRNQ14191 1432 aaPredicted RBP eCLIP11.18□□□□□ -0.62
ZNF43-204ENST00000593886 PDS5BQ9NTI5 1447 aa11.17□□□□□ -0.62
ZNF43-204ENST00000593886 KIF21AQ7Z4S6 1674 aa11.17□□□□□ -0.62
ZNF43-204ENST00000593886 TRIM41Q8WV44 630 aa11.16□□□□□ -0.62
ZNF43-204ENST00000593886 BIVM-ERCC5R4GMW8 1640 aa11.16□□□□□ -0.62
ZNF43-204ENST00000593886 SYNJ1O43426 1573 aa11.15□□□□□ -0.62
ZNF43-204ENST00000593886 CEP164Q9UPV0 1460 aa11.15□□□□□ -0.62
ZNF43-204ENST00000593886 TOP2BQ02880 1626 aa11.14□□□□□ -0.63
ZNF43-204ENST00000593886 CUX1P39880 1505 aa11.12□□□□□ -0.63
ZNF43-204ENST00000593886 ILDR1Q86SU0 546 aaPredicted RBP11.1□□□□□ -0.63
ZNF43-204ENST00000593886 DNMBPQ6XZF7 1577 aa11.09□□□□□ -0.63
ZNF43-204ENST00000593886 TOPBP1Q92547 1522 aa11.06□□□□□ -0.64
ZNF43-204ENST00000593886 URB2Q14146 1524 aaKnown RBP11.06□□□□□ -0.64
ZNF43-204ENST00000593886 ERCC6Q03468 1493 aa11.05□□□□□ -0.64
ZNF43-204ENST00000593886 MRC2Q9UBG0 1479 aa11.04□□□□□ -0.64
ZNF43-204ENST00000593886 AEBP2Q6ZN18 517 aaPredicted RBP11.02□□□□□ -0.65
ZNF43-204ENST00000593886 FGD5Q6ZNL6 1462 aa11.02□□□□□ -0.65
ZNF43-204ENST00000593886 THOC2Q8NI27 1593 aaKnown RBP11.01□□□□□ -0.65
ZNF43-204ENST00000593886 WDR62O43379 1518 aa11□□□□□ -0.65
ZNF43-204ENST00000593886 POLA1P09884 1462 aaPredicted RBP10.98□□□□□ -0.65
ZNF43-204ENST00000593886 EEA1Q15075 1411 aa10.97□□□□□ -0.65
ZNF43-204ENST00000593886 SOGA1O94964 1423 aa10.97□□□□□ -0.65
ZNF43-204ENST00000593886 WDR97A6NE52 1622 aa10.96□□□□□ -0.66
ZNF43-204ENST00000593886 RUSC2Q8N2Y8 1516 aa10.93□□□□□ -0.66
ZNF43-204ENST00000593886 ABCA10Q8WWZ4 1543 aa10.93□□□□□ -0.66
ZNF43-204ENST00000593886 RAD54L2Q9Y4B4 1467 aa10.93□□□□□ -0.66
ZNF43-204ENST00000593886 FAM9AQ8IZU1 332 aaPredicted RBP10.93□□□□□ -0.66
ZNF43-204ENST00000593886 TARBP1Q13395 1621 aaKnown RBP10.92□□□□□ -0.66
ZNF43-204ENST00000593886 KIF27Q86VH2 1401 aa10.92□□□□□ -0.66
ZNF43-204ENST00000593886 CUX2O14529 1486 aa10.91□□□□□ -0.66
ZNF43-204ENST00000593886 IFT140Q96RY7 1462 aa10.89□□□□□ -0.67
ZNF43-204ENST00000593886 ABCA5Q8WWZ7 1642 aa10.88□□□□□ -0.67
ZNF43-204ENST00000593886 CSRNP3Q8WYN3 585 aa10.87□□□□□ -0.67
ZNF43-204ENST00000593886 KIF21BO75037 1637 aa10.86□□□□□ -0.67
ZNF43-204ENST00000593886 PBRM1Q86U86 1689 aa10.84□□□□□ -0.67
ZNF43-204ENST00000593886 GAPVD1Q14C86 1478 aa10.83□□□□□ -0.68
ZNF43-204ENST00000593886 CUL7Q14999 1698 aa10.82□□□□□ -0.68
ZNF43-204ENST00000593886 TDRD9Q8NDG6 1382 aaKnown RBP10.81□□□□□ -0.68
ZNF43-204ENST00000593886 ERICH3Q5RHP9 1530 aa10.81□□□□□ -0.68
ZNF43-204ENST00000593886 EIF4G3O43432 1585 aaKnown RBP10.81□□□□□ -0.68
ZNF43-204ENST00000593886 IGF1RP08069 1367 aa10.81□□□□□ -0.68
ZNF43-204ENST00000593886 LOC105371045A0A1W2PR82 267 aa10.81□□□□□ -0.68
ZNF43-204ENST00000593886 GOLGA3Q08378 1498 aa10.8□□□□□ -0.68
ZNF43-204ENST00000593886 PRXQ9BXM0 1461 aa10.8□□□□□ -0.68
ZNF43-204ENST00000593886 ZNF608Q9ULD9 1512 aaPredicted RBP10.8□□□□□ -0.68
ZNF43-204ENST00000593886 AQRO60306 1485 aaKnown RBP eCLIP10.78□□□□□ -0.68
ZNF43-204ENST00000593886 GRIN2BQ13224 1484 aa10.77□□□□□ -0.69
ZNF43-204ENST00000593886 CARMIL1Q5VZK9 1371 aa10.76□□□□□ -0.69
ZNF43-204ENST00000593886 RAPGEF2Q9Y4G8 1499 aa10.76□□□□□ -0.69
ZNF43-204ENST00000593886 EHMT2Q96KQ7 1210 aa10.75□□□□□ -0.69
ZNF43-204ENST00000593886 ADAMTS12P58397 1594 aa10.74□□□□□ -0.69
ZNF43-204ENST00000593886 TNIKQ9UKE5 1360 aa10.72□□□□□ -0.69
ZNF43-204ENST00000593886 UBTFP17480 764 aaKnown RBP10.72□□□□□ -0.69
ZNF43-204ENST00000593886 MAGI1Q96QZ7 1491 aaPredicted RBP10.71□□□□□ -0.69
ZNF43-204ENST00000593886 FHAD1B1AJZ9 1412 aa10.71□□□□□ -0.69
ZNF43-204ENST00000593886 SNAPC4Q5SXM2 1469 aa10.71□□□□□ -0.7
ZNF43-204ENST00000593886 CTTNBP2Q8WZ74 1663 aa10.7□□□□□ -0.7
ZNF43-204ENST00000593886 SYNJ2O15056 1496 aa10.65□□□□□ -0.7
ZNF43-204ENST00000593886 CEP162Q5TB80 1403 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms