RNA–Protein interactions for RNA: ENST00000593609.1

ARHGEF1-205, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 2

Gene ARHGEF1, Length 576 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-205ENST00000593609 NISCHQ9Y2I1 1504 aa44.65■■■■■ 4.74
ARHGEF1-205ENST00000593609 CCDC180Q9P1Z9 1646 aa39.42■■■■□ 3.9
ARHGEF1-205ENST00000593609 ABCC9O60706 1549 aa37.86■■■■□ 3.65
ARHGEF1-205ENST00000593609 ZCCHC6Q5VYS8 1495 aaKnown RBP37.34■■■■□ 3.57
ARHGEF1-205ENST00000593609 DCAF1Q9Y4B6 1507 aa37.05■■■■□ 3.52
ARHGEF1-205ENST00000593609 MYO15BQ96JP2 1530 aa36.99■■■■□ 3.51
ARHGEF1-205ENST00000593609 NACADO15069 1562 aa36.91■■■■□ 3.5
ARHGEF1-205ENST00000593609 DCAF8L2P0C7V8 631 aa36.9■■■■□ 3.5
ARHGEF1-205ENST00000593609 RB1CC1Q8TDY2 1594 aa36.78■■■■□ 3.48
ARHGEF1-205ENST00000593609 SCRIBQ14160 1630 aa35.93■■■■□ 3.34
ARHGEF1-205ENST00000593609 UNC13AQ9UPW8 1703 aa35.83■■■■□ 3.33
ARHGEF1-205ENST00000593609 BICRAQ9NZM4 1560 aa35.6■■■■□ 3.29
ARHGEF1-205ENST00000593609 SHROOM4Q9ULL8 1493 aa35.53■■■■□ 3.28
ARHGEF1-205ENST00000593609 PABPN1Q86U42 306 aaKnown RBP eCLIP35.45■■■■□ 3.272e-6■■■□□ 16.7
ARHGEF1-205ENST00000593609 CECR2Q9BXF3 1484 aa34.65■■■■□ 3.14
ARHGEF1-205ENST00000593609 EIF4G1Q04637 1599 aaKnown RBP34.62■■■■□ 3.13
ARHGEF1-205ENST00000593609 BAZ1AQ9NRL2 1556 aaPredicted RBP34.57■■■■□ 3.13
ARHGEF1-205ENST00000593609 SMARCA4P51532 1647 aa34.48■■■■□ 3.11
ARHGEF1-205ENST00000593609 MROH2BQ7Z745 1585 aa34.37■■■■□ 3.09
ARHGEF1-205ENST00000593609 CC2D2AQ9P2K1 1620 aa34.28■■■■□ 3.08
ARHGEF1-205ENST00000593609 RSF1Q96T23 1441 aaPredicted RBP34.25■■■■□ 3.07
ARHGEF1-205ENST00000593609 PEG3Q9GZU2 1588 aa34.19■■■■□ 3.06
ARHGEF1-205ENST00000593609 SMARCA2P51531 1590 aa34.16■■■■□ 3.06
ARHGEF1-205ENST00000593609 ATAD2BQ9ULI0 1458 aa34.14■■■■□ 3.06
ARHGEF1-205ENST00000593609 DNAJC5BQ9UF47 199 aa34.12■■■■□ 3.05
ARHGEF1-205ENST00000593609 NCAPD3P42695 1498 aa34.07■■■■□ 3.04
ARHGEF1-205ENST00000593609 WIZO95785 1651 aa33.99■■■■□ 3.03
ARHGEF1-205ENST00000593609 HMGXB3Q12766 1538 aa33.96■■■■□ 3.03
ARHGEF1-205ENST00000593609 BAZ1BQ9UIG0 1483 aaKnown RBP33.9■■■■□ 3.02
ARHGEF1-205ENST00000593609 SUPT5HO00267 1087 aaKnown RBP33.79■■■■□ 3
ARHGEF1-205ENST00000593609 TOP2AP11388 1531 aaKnown RBP33.76■■■■□ 3
ARHGEF1-205ENST00000593609 CCDC88BA6NC98 1476 aa33.33■■■□□ 2.93
ARHGEF1-205ENST00000593609 CADPSQ9ULU8 1353 aa33.09■■■□□ 2.89
ARHGEF1-205ENST00000593609 LAMC3Q9Y6N6 1575 aa33.04■■■□□ 2.88
ARHGEF1-205ENST00000593609 CFTRP13569 1480 aa33.04■■■□□ 2.88
ARHGEF1-205ENST00000593609 NESP48681 1621 aa32.93■■■□□ 2.86
ARHGEF1-205ENST00000593609 PDS5BQ9NTI5 1447 aa32.81■■■□□ 2.84
ARHGEF1-205ENST00000593609 PRDM2Q13029 1718 aa32.77■■■□□ 2.84
ARHGEF1-205ENST00000593609 FANCD2Q9BXW9 1451 aa32.68■■■□□ 2.82
ARHGEF1-205ENST00000593609 ERCC6Q03468 1493 aa32.61■■■□□ 2.81
ARHGEF1-205ENST00000593609 CEP164Q9UPV0 1460 aa32.59■■■□□ 2.81
ARHGEF1-205ENST00000593609 KIF21AQ7Z4S6 1674 aa32.55■■■□□ 2.8
ARHGEF1-205ENST00000593609 MRC2Q9UBG0 1479 aa32.42■■■□□ 2.78
ARHGEF1-205ENST00000593609 ABCC8Q09428 1581 aa32.34■■■□□ 2.77
ARHGEF1-205ENST00000593609 THOC2Q8NI27 1593 aaKnown RBP32.34■■■□□ 2.77
ARHGEF1-205ENST00000593609 URB2Q14146 1524 aaKnown RBP32.31■■■□□ 2.76
ARHGEF1-205ENST00000593609 WRNQ14191 1432 aaPredicted RBP eCLIP32.29■■■□□ 2.76
ARHGEF1-205ENST00000593609 WDR62O43379 1518 aa32.28■■■□□ 2.76
ARHGEF1-205ENST00000593609 DNMBPQ6XZF7 1577 aa32.27■■■□□ 2.76
ARHGEF1-205ENST00000593609 TOPBP1Q92547 1522 aa32.23■■■□□ 2.75
ARHGEF1-205ENST00000593609 CUX1P39880 1505 aa32.22■■■□□ 2.75
ARHGEF1-205ENST00000593609 TOP2BQ02880 1626 aa32.14■■■□□ 2.74
ARHGEF1-205ENST00000593609 BIVM-ERCC5R4GMW8 1640 aa32.12■■■□□ 2.73
ARHGEF1-205ENST00000593609 SYNJ1O43426 1573 aa32.12■■■□□ 2.73
ARHGEF1-205ENST00000593609 CUX2O14529 1486 aa32.09■■■□□ 2.73
ARHGEF1-205ENST00000593609 FGD5Q6ZNL6 1462 aa32.02■■■□□ 2.72
ARHGEF1-205ENST00000593609 POLA1P09884 1462 aaPredicted RBP32■■■□□ 2.71
ARHGEF1-205ENST00000593609 CHIC1Q5VXU3 224 aa31.98■■■□□ 2.71
ARHGEF1-205ENST00000593609 TRIM41Q8WV44 630 aa31.95■■■□□ 2.71
ARHGEF1-205ENST00000593609 IFT140Q96RY7 1462 aa31.91■■■□□ 2.7
ARHGEF1-205ENST00000593609 SOGA1O94964 1423 aa31.89■■■□□ 2.7
ARHGEF1-205ENST00000593609 TARBP1Q13395 1621 aaKnown RBP31.82■■■□□ 2.69
ARHGEF1-205ENST00000593609 RAD54L2Q9Y4B4 1467 aa31.81■■■□□ 2.68
ARHGEF1-205ENST00000593609 ABCA10Q8WWZ4 1543 aa31.78■■■□□ 2.68
ARHGEF1-205ENST00000593609 WDR97A6NE52 1622 aa31.7■■■□□ 2.66
ARHGEF1-205ENST00000593609 ZNF608Q9ULD9 1512 aaPredicted RBP31.63■■■□□ 2.65
ARHGEF1-205ENST00000593609 TDRD9Q8NDG6 1382 aaKnown RBP31.59■■■□□ 2.65
ARHGEF1-205ENST00000593609 KIF27Q86VH2 1401 aa31.58■■■□□ 2.65
ARHGEF1-205ENST00000593609 ABCA5Q8WWZ7 1642 aa31.57■■■□□ 2.64
ARHGEF1-205ENST00000593609 EIF4G3O43432 1585 aaKnown RBP31.56■■■□□ 2.64
ARHGEF1-205ENST00000593609 AQRO60306 1485 aaKnown RBP eCLIP31.54■■■□□ 2.643e-9■■■■■ 45.7
ARHGEF1-205ENST00000593609 GAPVD1Q14C86 1478 aa31.53■■■□□ 2.64
ARHGEF1-205ENST00000593609 EEA1Q15075 1411 aa31.47■■■□□ 2.63
ARHGEF1-205ENST00000593609 GRIN2BQ13224 1484 aa31.46■■■□□ 2.63
ARHGEF1-205ENST00000593609 ERICH3Q5RHP9 1530 aa31.42■■■□□ 2.62
ARHGEF1-205ENST00000593609 RUSC2Q8N2Y8 1516 aa31.39■■■□□ 2.61
ARHGEF1-205ENST00000593609 PBRM1Q86U86 1689 aa31.36■■■□□ 2.61
ARHGEF1-205ENST00000593609 IGF1RP08069 1367 aa31.35■■■□□ 2.61
ARHGEF1-205ENST00000593609 MAGI1Q96QZ7 1491 aaPredicted RBP31.33■■■□□ 2.61
ARHGEF1-205ENST00000593609 SNAPC4Q5SXM2 1469 aa31.28■■■□□ 2.6
ARHGEF1-205ENST00000593609 CSRNP3Q8WYN3 585 aa31.25■■■□□ 2.59
ARHGEF1-205ENST00000593609 CUL7Q14999 1698 aa31.24■■■□□ 2.59
ARHGEF1-205ENST00000593609 FHAD1B1AJZ9 1412 aa31.23■■■□□ 2.59
ARHGEF1-205ENST00000593609 ADAMTS12P58397 1594 aa31.22■■■□□ 2.59
ARHGEF1-205ENST00000593609 SYNJ2O15056 1496 aa31.18■■■□□ 2.58
ARHGEF1-205ENST00000593609 CARMIL1Q5VZK9 1371 aa31.17■■■□□ 2.58
ARHGEF1-205ENST00000593609 FAM9AQ8IZU1 332 aaPredicted RBP31.17■■■□□ 2.58
ARHGEF1-205ENST00000593609 PRXQ9BXM0 1461 aa31.14■■■□□ 2.58
ARHGEF1-205ENST00000593609 CHMP7Q8WUX9 453 aaPredicted RBP31.07■■■□□ 2.56
ARHGEF1-205ENST00000593609 RAPGEF2Q9Y4G8 1499 aa31.07■■■□□ 2.56
ARHGEF1-205ENST00000593609 GRIN2AQ12879 1464 aa31.05■■■□□ 2.56
ARHGEF1-205ENST00000593609 KIF21BO75037 1637 aa31.02■■■□□ 2.56
ARHGEF1-205ENST00000593609 FBLN2P98095 1184 aa31■■■□□ 2.55
ARHGEF1-205ENST00000593609 CHD1O14646 1710 aa30.98■■■□□ 2.55
ARHGEF1-205ENST00000593609 NUP160Q12769 1436 aa30.9■■■□□ 2.54
ARHGEF1-205ENST00000593609 GOLGA3Q08378 1498 aa30.9■■■□□ 2.54
ARHGEF1-205ENST00000593609 OSCARQ8IYS5 282 aa30.84■■■□□ 2.53
ARHGEF1-205ENST00000593609 CEP170Q5SW79 1584 aa30.82■■■□□ 2.52
ARHGEF1-205ENST00000593609 KIAA0586Q9BVV6 1533 aa30.78■■■□□ 2.52
ARHGEF1-205ENST00000593609 CLASP1Q7Z460 1538 aa30.74■■■□□ 2.51
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms