RNA–Protein interactions for RNA: ENST00000593598.5

SNAPC2-202, Transcript of small nuclear RNA activating complex polypeptide 2, humanhuman

TSL 3

Gene SNAPC2, Length 190 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC2-202ENST00000593598 NISCHQ9Y2I1 1504 aa32.94■■■□□ 2.86
SNAPC2-202ENST00000593598 CCDC180Q9P1Z9 1646 aa29.16■■■□□ 2.26
SNAPC2-202ENST00000593598 ABCC9O60706 1549 aa28.38■■■□□ 2.13
SNAPC2-202ENST00000593598 DCAF8L2P0C7V8 631 aa27.5■■□□□ 1.99
SNAPC2-202ENST00000593598 ZCCHC6Q5VYS8 1495 aaKnown RBP27.46■■□□□ 1.99
SNAPC2-202ENST00000593598 NACADO15069 1562 aa27.4■■□□□ 1.98
SNAPC2-202ENST00000593598 RB1CC1Q8TDY2 1594 aa27.38■■□□□ 1.97
SNAPC2-202ENST00000593598 MYO15BQ96JP2 1530 aa27.31■■□□□ 1.96
SNAPC2-202ENST00000593598 DCAF1Q9Y4B6 1507 aa27.26■■□□□ 1.95
SNAPC2-202ENST00000593598 UNC13AQ9UPW8 1703 aa26.73■■□□□ 1.87
SNAPC2-202ENST00000593598 SCRIBQ14160 1630 aa26.63■■□□□ 1.85
SNAPC2-202ENST00000593598 PABPN1Q86U42 306 aaKnown RBP eCLIP26.59■■□□□ 1.85
SNAPC2-202ENST00000593598 BICRAQ9NZM4 1560 aa26.53■■□□□ 1.84
SNAPC2-202ENST00000593598 SHROOM4Q9ULL8 1493 aa26.27■■□□□ 1.8
SNAPC2-202ENST00000593598 DNAJC5BQ9UF47 199 aa26.22■■□□□ 1.79
SNAPC2-202ENST00000593598 EIF4G1Q04637 1599 aaKnown RBP25.82■■□□□ 1.72
SNAPC2-202ENST00000593598 CC2D2AQ9P2K1 1620 aa25.66■■□□□ 1.7
SNAPC2-202ENST00000593598 CECR2Q9BXF3 1484 aa25.64■■□□□ 1.69
SNAPC2-202ENST00000593598 BAZ1AQ9NRL2 1556 aaPredicted RBP25.51■■□□□ 1.67
SNAPC2-202ENST00000593598 SMARCA4P51532 1647 aa25.49■■□□□ 1.67
SNAPC2-202ENST00000593598 MROH2BQ7Z745 1585 aa25.38■■□□□ 1.65
SNAPC2-202ENST00000593598 ATAD2BQ9ULI0 1458 aa25.34■■□□□ 1.65
SNAPC2-202ENST00000593598 NCAPD3P42695 1498 aa25.3■■□□□ 1.64
SNAPC2-202ENST00000593598 SMARCA2P51531 1590 aa25.3■■□□□ 1.64
SNAPC2-202ENST00000593598 PEG3Q9GZU2 1588 aa25.25■■□□□ 1.63
SNAPC2-202ENST00000593598 RSF1Q96T23 1441 aaPredicted RBP25.18■■□□□ 1.62
SNAPC2-202ENST00000593598 HMGXB3Q12766 1538 aa25.16■■□□□ 1.62
SNAPC2-202ENST00000593598 BAZ1BQ9UIG0 1483 aaKnown RBP25.13■■□□□ 1.61
SNAPC2-202ENST00000593598 WIZO95785 1651 aa25.11■■□□□ 1.61
SNAPC2-202ENST00000593598 TOP2AP11388 1531 aaKnown RBP24.86■■□□□ 1.57
SNAPC2-202ENST00000593598 SUPT5HO00267 1087 aaKnown RBP24.72■■□□□ 1.55
SNAPC2-202ENST00000593598 NESP48681 1621 aa24.61■■□□□ 1.53
SNAPC2-202ENST00000593598 CCDC88BA6NC98 1476 aa24.58■■□□□ 1.53
SNAPC2-202ENST00000593598 CADPSQ9ULU8 1353 aa24.58■■□□□ 1.53
SNAPC2-202ENST00000593598 LAMC3Q9Y6N6 1575 aa24.58■■□□□ 1.52
SNAPC2-202ENST00000593598 CFTRP13569 1480 aa24.46■■□□□ 1.51
SNAPC2-202ENST00000593598 ERCC6Q03468 1493 aa24.45■■□□□ 1.5
SNAPC2-202ENST00000593598 PDS5BQ9NTI5 1447 aa24.44■■□□□ 1.5
SNAPC2-202ENST00000593598 KIF21AQ7Z4S6 1674 aa24.3■■□□□ 1.48
SNAPC2-202ENST00000593598 FANCD2Q9BXW9 1451 aa24.28■■□□□ 1.48
SNAPC2-202ENST00000593598 PRDM2Q13029 1718 aa24.24■■□□□ 1.47
SNAPC2-202ENST00000593598 CUX2O14529 1486 aa24.22■■□□□ 1.47
SNAPC2-202ENST00000593598 CEP164Q9UPV0 1460 aa24.22■■□□□ 1.47
SNAPC2-202ENST00000593598 DNAJC5Q9H3Z4 198 aa24.17■■□□□ 1.46
SNAPC2-202ENST00000593598 THOC2Q8NI27 1593 aaKnown RBP24.16■■□□□ 1.46
SNAPC2-202ENST00000593598 MRC2Q9UBG0 1479 aa24.14■■□□□ 1.46
SNAPC2-202ENST00000593598 WDR62O43379 1518 aa24.05■■□□□ 1.44
SNAPC2-202ENST00000593598 URB2Q14146 1524 aaKnown RBP24.01■■□□□ 1.43
SNAPC2-202ENST00000593598 ABCC8Q09428 1581 aa23.95■■□□□ 1.42
SNAPC2-202ENST00000593598 TOPBP1Q92547 1522 aa23.9■■□□□ 1.42
SNAPC2-202ENST00000593598 DNMBPQ6XZF7 1577 aa23.89■■□□□ 1.41
SNAPC2-202ENST00000593598 CUX1P39880 1505 aa23.79■■□□□ 1.4
SNAPC2-202ENST00000593598 WRNQ14191 1432 aaPredicted RBP eCLIP23.74■■□□□ 1.39
SNAPC2-202ENST00000593598 IFT140Q96RY7 1462 aa23.73■■□□□ 1.39
SNAPC2-202ENST00000593598 POLA1P09884 1462 aaPredicted RBP23.71■■□□□ 1.39
SNAPC2-202ENST00000593598 FGD5Q6ZNL6 1462 aa23.68■■□□□ 1.38
SNAPC2-202ENST00000593598 SOGA1O94964 1423 aa23.65■■□□□ 1.38
SNAPC2-202ENST00000593598 TOP2BQ02880 1626 aa23.64■■□□□ 1.38
SNAPC2-202ENST00000593598 SYNJ1O43426 1573 aa23.63■■□□□ 1.37
SNAPC2-202ENST00000593598 BIVM-ERCC5R4GMW8 1640 aa23.62■■□□□ 1.37
SNAPC2-202ENST00000593598 RAD54L2Q9Y4B4 1467 aa23.62■■□□□ 1.37
SNAPC2-202ENST00000593598 TARBP1Q13395 1621 aaKnown RBP23.62■■□□□ 1.37
SNAPC2-202ENST00000593598 ZNF608Q9ULD9 1512 aaPredicted RBP23.59■■□□□ 1.37
SNAPC2-202ENST00000593598 AQRO60306 1485 aaKnown RBP eCLIP23.49■■□□□ 1.35
SNAPC2-202ENST00000593598 TDRD9Q8NDG6 1382 aaKnown RBP23.49■■□□□ 1.35
SNAPC2-202ENST00000593598 ABCA10Q8WWZ4 1543 aa23.48■■□□□ 1.35
SNAPC2-202ENST00000593598 EIF4G3O43432 1585 aaKnown RBP23.48■■□□□ 1.35
SNAPC2-202ENST00000593598 WDR97A6NE52 1622 aa23.44■■□□□ 1.34
SNAPC2-202ENST00000593598 GAPVD1Q14C86 1478 aa23.36■■□□□ 1.33
SNAPC2-202ENST00000593598 TRIM41Q8WV44 630 aa23.35■■□□□ 1.33
SNAPC2-202ENST00000593598 ABCA5Q8WWZ7 1642 aa23.33■■□□□ 1.33
SNAPC2-202ENST00000593598 GRIN2BQ13224 1484 aa23.33■■□□□ 1.33
SNAPC2-202ENST00000593598 PBRM1Q86U86 1689 aa23.26■■□□□ 1.31
SNAPC2-202ENST00000593598 SNAPC4Q5SXM2 1469 aa23.26■■□□□ 1.31
SNAPC2-202ENST00000593598 MAGI1Q96QZ7 1491 aaPredicted RBP23.24■■□□□ 1.31
SNAPC2-202ENST00000593598 KIF27Q86VH2 1401 aa23.24■■□□□ 1.31
SNAPC2-202ENST00000593598 OSCARQ8IYS5 282 aa23.21■■□□□ 1.31
SNAPC2-202ENST00000593598 FBLN2P98095 1184 aa23.2■■□□□ 1.3
SNAPC2-202ENST00000593598 ERICH3Q5RHP9 1530 aa23.19■■□□□ 1.3
SNAPC2-202ENST00000593598 CHIC1Q5VXU3 224 aa23.19■■□□□ 1.3
SNAPC2-202ENST00000593598 CHMP7Q8WUX9 453 aaPredicted RBP23.18■■□□□ 1.3
SNAPC2-202ENST00000593598 SYNJ2O15056 1496 aa23.16■■□□□ 1.3
SNAPC2-202ENST00000593598 CHD1O14646 1710 aa23.14■■□□□ 1.3
SNAPC2-202ENST00000593598 IGF1RP08069 1367 aa23.13■■□□□ 1.29
SNAPC2-202ENST00000593598 FHAD1B1AJZ9 1412 aa23.11■■□□□ 1.29
SNAPC2-202ENST00000593598 ADAMTS12P58397 1594 aa23.1■■□□□ 1.29
SNAPC2-202ENST00000593598 RUSC2Q8N2Y8 1516 aa23.08■■□□□ 1.28
SNAPC2-202ENST00000593598 GRIN2AQ12879 1464 aa23.02■■□□□ 1.28
SNAPC2-202ENST00000593598 CUL7Q14999 1698 aa23■■□□□ 1.27
SNAPC2-202ENST00000593598 CARMIL1Q5VZK9 1371 aa23■■□□□ 1.27
SNAPC2-202ENST00000593598 NUP160Q12769 1436 aa22.92■■□□□ 1.26
SNAPC2-202ENST00000593598 EEA1Q15075 1411 aa22.91■■□□□ 1.26
SNAPC2-202ENST00000593598 CSRNP3Q8WYN3 585 aa22.9■■□□□ 1.26
SNAPC2-202ENST00000593598 CLASP1Q7Z460 1538 aa22.9■■□□□ 1.26
SNAPC2-202ENST00000593598 CEP170Q5SW79 1584 aa22.89■■□□□ 1.25
SNAPC2-202ENST00000593598 RAPGEF2Q9Y4G8 1499 aa22.86■■□□□ 1.25
SNAPC2-202ENST00000593598 FAM9AQ8IZU1 332 aaPredicted RBP22.85■■□□□ 1.25
SNAPC2-202ENST00000593598 PRXQ9BXM0 1461 aa22.83■■□□□ 1.25
SNAPC2-202ENST00000593598 RIMBP3CA6NJZ7 1639 aa22.79■■□□□ 1.24
SNAPC2-202ENST00000593598 RIMBP3BA6NNM3 1639 aa22.79■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms