RNA–Protein interactions for RNA: ENST00000593409.5

SMIM7-211, Transcript of small integral membrane protein 7, humanhuman

TSL 5

Gene SMIM7, Length 1,757 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM7-211ENST00000593409 NISCHQ9Y2I1 1504 aa22.23■■□□□ 1.15
SMIM7-211ENST00000593409 AEBP2Q6ZN18 517 aaPredicted RBP20.03■□□□□ 0.8
SMIM7-211ENST00000593409 CHIC1Q5VXU3 224 aa19.49■□□□□ 0.71
SMIM7-211ENST00000593409 CCDC180Q9P1Z9 1646 aa19.4■□□□□ 0.7
SMIM7-211ENST00000593409 ZCCHC6Q5VYS8 1495 aaKnown RBP18.69■□□□□ 0.58
SMIM7-211ENST00000593409 DCAF1Q9Y4B6 1507 aa18.43■□□□□ 0.54
SMIM7-211ENST00000593409 DCAF8L2P0C7V8 631 aa18.26■□□□□ 0.51
SMIM7-211ENST00000593409 MYO15BQ96JP2 1530 aa18.21■□□□□ 0.51
SMIM7-211ENST00000593409 ABCC9O60706 1549 aa18.2■□□□□ 0.5
SMIM7-211ENST00000593409 SHROOM4Q9ULL8 1493 aa18.08■□□□□ 0.49
SMIM7-211ENST00000593409 NACADO15069 1562 aa18.05■□□□□ 0.48
SMIM7-211ENST00000593409 RB1CC1Q8TDY2 1594 aa17.88■□□□□ 0.45
SMIM7-211ENST00000593409 SCRIBQ14160 1630 aa17.77■□□□□ 0.44
SMIM7-211ENST00000593409 UNC13AQ9UPW8 1703 aa17.45■□□□□ 0.38
SMIM7-211ENST00000593409 SUPT5HO00267 1087 aaKnown RBP17.45■□□□□ 0.38
SMIM7-211ENST00000593409 BICRAQ9NZM4 1560 aa17.28■□□□□ 0.36
SMIM7-211ENST00000593409 RSF1Q96T23 1441 aaPredicted RBP17.24■□□□□ 0.35
SMIM7-211ENST00000593409 CECR2Q9BXF3 1484 aa17.21■□□□□ 0.35
SMIM7-211ENST00000593409 BAZ1AQ9NRL2 1556 aaPredicted RBP17.18■□□□□ 0.34
SMIM7-211ENST00000593409 PHF23Q9BUL5 403 aaPredicted RBP17.15■□□□□ 0.34
SMIM7-211ENST00000593409 PABPN1Q86U42 306 aaKnown RBP eCLIP17.14■□□□□ 0.33
SMIM7-211ENST00000593409 MROH2BQ7Z745 1585 aa17.14■□□□□ 0.33
SMIM7-211ENST00000593409 SMARCA4P51532 1647 aa17.08■□□□□ 0.32
SMIM7-211ENST00000593409 WIZO95785 1651 aa16.99■□□□□ 0.31
SMIM7-211ENST00000593409 SENP3Q9H4L4 574 aaPredicted RBP16.97■□□□□ 0.31
SMIM7-211ENST00000593409 PEG3Q9GZU2 1588 aa16.89■□□□□ 0.29
SMIM7-211ENST00000593409 TOP2AP11388 1531 aaKnown RBP16.88■□□□□ 0.29
SMIM7-211ENST00000593409 SMARCA2P51531 1590 aa16.81■□□□□ 0.28
SMIM7-211ENST00000593409 ATAD2BQ9ULI0 1458 aa16.77■□□□□ 0.28
SMIM7-211ENST00000593409 EIF4G1Q04637 1599 aaKnown RBP16.77■□□□□ 0.28
SMIM7-211ENST00000593409 BAZ1BQ9UIG0 1483 aaKnown RBP16.69■□□□□ 0.26
SMIM7-211ENST00000593409 CCDC88BA6NC98 1476 aa16.67■□□□□ 0.26
SMIM7-211ENST00000593409 HMGXB3Q12766 1538 aa16.64■□□□□ 0.25
SMIM7-211ENST00000593409 NCAPD3P42695 1498 aa16.63■□□□□ 0.25
SMIM7-211ENST00000593409 CC2D2AQ9P2K1 1620 aa16.5■□□□□ 0.23
SMIM7-211ENST00000593409 TRIM41Q8WV44 630 aa16.44■□□□□ 0.22
SMIM7-211ENST00000593409 ABCC8Q09428 1581 aa16.3■□□□□ 0.2
SMIM7-211ENST00000593409 CFTRP13569 1480 aa16.28■□□□□ 0.2
SMIM7-211ENST00000593409 WRNQ14191 1432 aaPredicted RBP eCLIP16.25■□□□□ 0.19
SMIM7-211ENST00000593409 PRDM2Q13029 1718 aa16.23■□□□□ 0.19
SMIM7-211ENST00000593409 CADPSQ9ULU8 1353 aa16.21■□□□□ 0.18
SMIM7-211ENST00000593409 SYNJ1O43426 1573 aa16.15■□□□□ 0.18
SMIM7-211ENST00000593409 TOP2BQ02880 1626 aa16.12■□□□□ 0.17
SMIM7-211ENST00000593409 EEA1Q15075 1411 aa16.11■□□□□ 0.17
SMIM7-211ENST00000593409 BIVM-ERCC5R4GMW8 1640 aa16.11■□□□□ 0.17
SMIM7-211ENST00000593409 LAMC3Q9Y6N6 1575 aa16.08■□□□□ 0.16
SMIM7-211ENST00000593409 FAM9AQ8IZU1 332 aaPredicted RBP16.08■□□□□ 0.16
SMIM7-211ENST00000593409 LOC105371045A0A1W2PR82 267 aa16.06■□□□□ 0.16
SMIM7-211ENST00000593409 CUX1P39880 1505 aa16.03■□□□□ 0.16
SMIM7-211ENST00000593409 FANCD2Q9BXW9 1451 aa16.02■□□□□ 0.16
SMIM7-211ENST00000593409 SOGA1O94964 1423 aa16.02■□□□□ 0.15
SMIM7-211ENST00000593409 NESP48681 1621 aa15.98■□□□□ 0.15
SMIM7-211ENST00000593409 PDS5BQ9NTI5 1447 aa15.95■□□□□ 0.14
SMIM7-211ENST00000593409 CSRNP3Q8WYN3 585 aa15.95■□□□□ 0.14
SMIM7-211ENST00000593409 DNAJC5BQ9UF47 199 aa15.95■□□□□ 0.14
SMIM7-211ENST00000593409 RUSC2Q8N2Y8 1516 aa15.93■□□□□ 0.14
SMIM7-211ENST00000593409 CEP164Q9UPV0 1460 aa15.93■□□□□ 0.14
SMIM7-211ENST00000593409 DNMBPQ6XZF7 1577 aa15.91■□□□□ 0.14
SMIM7-211ENST00000593409 KIF21BO75037 1637 aa15.87■□□□□ 0.13
SMIM7-211ENST00000593409 FGD5Q6ZNL6 1462 aa15.86■□□□□ 0.13
SMIM7-211ENST00000593409 KIF27Q86VH2 1401 aa15.86■□□□□ 0.13
SMIM7-211ENST00000593409 TOPBP1Q92547 1522 aa15.85■□□□□ 0.13
SMIM7-211ENST00000593409 GOLGA3Q08378 1498 aa15.85■□□□□ 0.13
SMIM7-211ENST00000593409 KIF21AQ7Z4S6 1674 aa15.82■□□□□ 0.12
SMIM7-211ENST00000593409 TNIKQ9UKE5 1360 aa15.81■□□□□ 0.12
SMIM7-211ENST00000593409 EHMT2Q96KQ7 1210 aa15.8■□□□□ 0.12
SMIM7-211ENST00000593409 PLPPR3Q6T4P5 718 aa15.8■□□□□ 0.12
SMIM7-211ENST00000593409 URB2Q14146 1524 aaKnown RBP15.79■□□□□ 0.12
SMIM7-211ENST00000593409 POLA1P09884 1462 aaPredicted RBP15.78■□□□□ 0.12
SMIM7-211ENST00000593409 FOXD1Q16676 465 aa15.77■□□□□ 0.12
SMIM7-211ENST00000593409 CUX2O14529 1486 aa15.77■□□□□ 0.11
SMIM7-211ENST00000593409 ERICH3Q5RHP9 1530 aa15.76■□□□□ 0.11
SMIM7-211ENST00000593409 ABCA10Q8WWZ4 1543 aa15.75■□□□□ 0.11
SMIM7-211ENST00000593409 PRXQ9BXM0 1461 aa15.75■□□□□ 0.11
SMIM7-211ENST00000593409 UBTFP17480 764 aaKnown RBP15.73■□□□□ 0.11
SMIM7-211ENST00000593409 MRC2Q9UBG0 1479 aa15.73■□□□□ 0.11
SMIM7-211ENST00000593409 CEP162Q5TB80 1403 aa15.71■□□□□ 0.11
SMIM7-211ENST00000593409 RAPGEF2Q9Y4G8 1499 aa15.7■□□□□ 0.1
SMIM7-211ENST00000593409 RAD54L2Q9Y4B4 1467 aa15.69■□□□□ 0.1
SMIM7-211ENST00000593409 WDR97A6NE52 1622 aa15.68■□□□□ 0.1
SMIM7-211ENST00000593409 IGF1RP08069 1367 aa15.67■□□□□ 0.1
SMIM7-211ENST00000593409 ERCC6Q03468 1493 aa15.64■□□□□ 0.09
SMIM7-211ENST00000593409 WDR62O43379 1518 aa15.64■□□□□ 0.09
SMIM7-211ENST00000593409 TARBP1Q13395 1621 aaKnown RBP15.61■□□□□ 0.09
SMIM7-211ENST00000593409 CARMIL1Q5VZK9 1371 aa15.61■□□□□ 0.09
SMIM7-211ENST00000593409 ABCA5Q8WWZ7 1642 aa15.61■□□□□ 0.09
SMIM7-211ENST00000593409 CUL7Q14999 1698 aa15.6■□□□□ 0.09
SMIM7-211ENST00000593409 CLIP1P30622 1438 aa15.58■□□□□ 0.08
SMIM7-211ENST00000593409 GAPVD1Q14C86 1478 aa15.57■□□□□ 0.08
SMIM7-211ENST00000593409 THOC2Q8NI27 1593 aaKnown RBP15.56■□□□□ 0.08
SMIM7-211ENST00000593409 IFT140Q96RY7 1462 aa15.55■□□□□ 0.08
SMIM7-211ENST00000593409 TDRD9Q8NDG6 1382 aaKnown RBP15.53■□□□□ 0.08
SMIM7-211ENST00000593409 PBRM1Q86U86 1689 aa15.47■□□□□ 0.07
SMIM7-211ENST00000593409 TRIM26Q12899 539 aaPredicted RBP15.47■□□□□ 0.07
SMIM7-211ENST00000593409 VPS8Q8N3P4 1428 aa15.46■□□□□ 0.07
SMIM7-211ENST00000593409 GRIN2BQ13224 1484 aa15.45■□□□□ 0.06
SMIM7-211ENST00000593409 AQRO60306 1485 aaKnown RBP eCLIP15.42■□□□□ 0.06
SMIM7-211ENST00000593409 FHAD1B1AJZ9 1412 aa15.42■□□□□ 0.06
SMIM7-211ENST00000593409 PCGF6Q9BYE7 350 aa15.41■□□□□ 0.06
SMIM7-211ENST00000593409 CTTNBP2Q8WZ74 1663 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 145.5 ms