RNA–Protein interactions for RNA: ENST00000593267.2

CACNA1A-213, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 2

Gene CACNA1A, Length 567 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-213ENST00000593267 NISCHQ9Y2I1 1504 aa26.9■■□□□ 1.9
CACNA1A-213ENST00000593267 CCDC180Q9P1Z9 1646 aa23.68■■□□□ 1.38
CACNA1A-213ENST00000593267 ABCC9O60706 1549 aa23.13■■□□□ 1.29
CACNA1A-213ENST00000593267 ZCCHC6Q5VYS8 1495 aaKnown RBP22.57■■□□□ 1.2
CACNA1A-213ENST00000593267 DCAF1Q9Y4B6 1507 aa22.31■■□□□ 1.16
CACNA1A-213ENST00000593267 MYO15BQ96JP2 1530 aa22.16■■□□□ 1.14
CACNA1A-213ENST00000593267 NACADO15069 1562 aa22.04■■□□□ 1.12
CACNA1A-213ENST00000593267 DCAF8L2P0C7V8 631 aa22.04■■□□□ 1.12
CACNA1A-213ENST00000593267 RB1CC1Q8TDY2 1594 aa21.95■■□□□ 1.1
CACNA1A-213ENST00000593267 DNAJC5BQ9UF47 199 aa21.79■■□□□ 1.08
CACNA1A-213ENST00000593267 SCRIBQ14160 1630 aa21.62■■□□□ 1.05
CACNA1A-213ENST00000593267 SHROOM4Q9ULL8 1493 aa21.58■■□□□ 1.05
CACNA1A-213ENST00000593267 UNC13AQ9UPW8 1703 aa21.51■■□□□ 1.03
CACNA1A-213ENST00000593267 PABPN1Q86U42 306 aaKnown RBP eCLIP21.49■■□□□ 1.03
CACNA1A-213ENST00000593267 BICRAQ9NZM4 1560 aa21.26■□□□□ 0.99
CACNA1A-213ENST00000593267 CC2D2AQ9P2K1 1620 aa20.89■□□□□ 0.93
CACNA1A-213ENST00000593267 CECR2Q9BXF3 1484 aa20.86■□□□□ 0.93
CACNA1A-213ENST00000593267 BAZ1AQ9NRL2 1556 aaPredicted RBP20.8■□□□□ 0.92
CACNA1A-213ENST00000593267 EIF4G1Q04637 1599 aaKnown RBP20.78■□□□□ 0.92
CACNA1A-213ENST00000593267 SMARCA4P51532 1647 aa20.76■□□□□ 0.91
CACNA1A-213ENST00000593267 MROH2BQ7Z745 1585 aa20.74■□□□□ 0.91
CACNA1A-213ENST00000593267 RSF1Q96T23 1441 aaPredicted RBP20.72■□□□□ 0.91
CACNA1A-213ENST00000593267 SUPT5HO00267 1087 aaKnown RBP20.61■□□□□ 0.89
CACNA1A-213ENST00000593267 WIZO95785 1651 aa20.58■□□□□ 0.88
CACNA1A-213ENST00000593267 PEG3Q9GZU2 1588 aa20.55■□□□□ 0.88
CACNA1A-213ENST00000593267 SMARCA2P51531 1590 aa20.46■□□□□ 0.87
CACNA1A-213ENST00000593267 ATAD2BQ9ULI0 1458 aa20.43■□□□□ 0.86
CACNA1A-213ENST00000593267 TOP2AP11388 1531 aaKnown RBP20.39■□□□□ 0.85
CACNA1A-213ENST00000593267 HMGXB3Q12766 1538 aa20.32■□□□□ 0.84
CACNA1A-213ENST00000593267 NCAPD3P42695 1498 aa20.3■□□□□ 0.84
CACNA1A-213ENST00000593267 BAZ1BQ9UIG0 1483 aaKnown RBP20.3■□□□□ 0.84
CACNA1A-213ENST00000593267 DNAJC5Q9H3Z4 198 aa20.17■□□□□ 0.82
CACNA1A-213ENST00000593267 CCDC88BA6NC98 1476 aa20.11■□□□□ 0.81
CACNA1A-213ENST00000593267 ERCC6Q03468 1493 aa20.02■□□□□ 0.8
CACNA1A-213ENST00000593267 CUX2O14529 1486 aa20■□□□□ 0.79
CACNA1A-213ENST00000593267 PRDM2Q13029 1718 aa19.8■□□□□ 0.76
CACNA1A-213ENST00000593267 NESP48681 1621 aa19.8■□□□□ 0.76
CACNA1A-213ENST00000593267 CFTRP13569 1480 aa19.79■□□□□ 0.76
CACNA1A-213ENST00000593267 CADPSQ9ULU8 1353 aa19.73■□□□□ 0.75
CACNA1A-213ENST00000593267 LAMC3Q9Y6N6 1575 aa19.7■□□□□ 0.74
CACNA1A-213ENST00000593267 CHIC1Q5VXU3 224 aa19.66■□□□□ 0.74
CACNA1A-213ENST00000593267 THOC2Q8NI27 1593 aaKnown RBP19.64■□□□□ 0.73
CACNA1A-213ENST00000593267 ABCC8Q09428 1581 aa19.61■□□□□ 0.73
CACNA1A-213ENST00000593267 KIF21AQ7Z4S6 1674 aa19.57■□□□□ 0.72
CACNA1A-213ENST00000593267 PDS5BQ9NTI5 1447 aa19.55■□□□□ 0.72
CACNA1A-213ENST00000593267 FANCD2Q9BXW9 1451 aa19.53■□□□□ 0.72
CACNA1A-213ENST00000593267 WRNQ14191 1432 aaPredicted RBP eCLIP19.51■□□□□ 0.71
CACNA1A-213ENST00000593267 SYNJ1O43426 1573 aa19.49■□□□□ 0.71
CACNA1A-213ENST00000593267 BIVM-ERCC5R4GMW8 1640 aa19.47■□□□□ 0.71
CACNA1A-213ENST00000593267 TOP2BQ02880 1626 aa19.45■□□□□ 0.7
CACNA1A-213ENST00000593267 CEP164Q9UPV0 1460 aa19.45■□□□□ 0.7
CACNA1A-213ENST00000593267 CUX1P39880 1505 aa19.43■□□□□ 0.7
CACNA1A-213ENST00000593267 TRIM41Q8WV44 630 aa19.43■□□□□ 0.7
CACNA1A-213ENST00000593267 MRC2Q9UBG0 1479 aa19.38■□□□□ 0.69
CACNA1A-213ENST00000593267 DNMBPQ6XZF7 1577 aa19.36■□□□□ 0.69
CACNA1A-213ENST00000593267 WDR62O43379 1518 aa19.33■□□□□ 0.68
CACNA1A-213ENST00000593267 URB2Q14146 1524 aaKnown RBP19.31■□□□□ 0.68
CACNA1A-213ENST00000593267 TOPBP1Q92547 1522 aa19.31■□□□□ 0.68
CACNA1A-213ENST00000593267 FGD5Q6ZNL6 1462 aa19.23■□□□□ 0.67
CACNA1A-213ENST00000593267 POLA1P09884 1462 aaPredicted RBP19.19■□□□□ 0.66
CACNA1A-213ENST00000593267 SOGA1O94964 1423 aa19.15■□□□□ 0.66
CACNA1A-213ENST00000593267 WDR97A6NE52 1622 aa19.14■□□□□ 0.66
CACNA1A-213ENST00000593267 EEA1Q15075 1411 aa19.14■□□□□ 0.65
CACNA1A-213ENST00000593267 ABCA10Q8WWZ4 1543 aa19.1■□□□□ 0.65
CACNA1A-213ENST00000593267 RUSC2Q8N2Y8 1516 aa19.09■□□□□ 0.65
CACNA1A-213ENST00000593267 TARBP1Q13395 1621 aaKnown RBP19.08■□□□□ 0.65
CACNA1A-213ENST00000593267 RAD54L2Q9Y4B4 1467 aa19.08■□□□□ 0.64
CACNA1A-213ENST00000593267 OSCARQ8IYS5 282 aa19.06■□□□□ 0.64
CACNA1A-213ENST00000593267 KIF27Q86VH2 1401 aa19.03■□□□□ 0.64
CACNA1A-213ENST00000593267 ABCA5Q8WWZ7 1642 aa19■□□□□ 0.63
CACNA1A-213ENST00000593267 FAM9AQ8IZU1 332 aaPredicted RBP19■□□□□ 0.63
CACNA1A-213ENST00000593267 IFT140Q96RY7 1462 aa19■□□□□ 0.63
CACNA1A-213ENST00000593267 KIF21BO75037 1637 aa18.94■□□□□ 0.62
CACNA1A-213ENST00000593267 CSRNP3Q8WYN3 585 aa18.94■□□□□ 0.62
CACNA1A-213ENST00000593267 PBRM1Q86U86 1689 aa18.9■□□□□ 0.62
CACNA1A-213ENST00000593267 GAPVD1Q14C86 1478 aa18.89■□□□□ 0.61
CACNA1A-213ENST00000593267 ERICH3Q5RHP9 1530 aa18.89■□□□□ 0.61
CACNA1A-213ENST00000593267 EIF4G3O43432 1585 aaKnown RBP18.88■□□□□ 0.61
CACNA1A-213ENST00000593267 CUL7Q14999 1698 aa18.87■□□□□ 0.61
CACNA1A-213ENST00000593267 TDRD9Q8NDG6 1382 aaKnown RBP18.87■□□□□ 0.61
CACNA1A-213ENST00000593267 PRXQ9BXM0 1461 aa18.87■□□□□ 0.61
CACNA1A-213ENST00000593267 ZNF608Q9ULD9 1512 aaPredicted RBP18.86■□□□□ 0.61
CACNA1A-213ENST00000593267 IGF1RP08069 1367 aa18.86■□□□□ 0.61
CACNA1A-213ENST00000593267 RIMBP3CA6NJZ7 1639 aa18.84■□□□□ 0.61
CACNA1A-213ENST00000593267 RIMBP3BA6NNM3 1639 aa18.84■□□□□ 0.61
CACNA1A-213ENST00000593267 RIMBP3Q9UFD9 1639 aa18.84■□□□□ 0.61
CACNA1A-213ENST00000593267 GOLGA3Q08378 1498 aa18.84■□□□□ 0.61
CACNA1A-213ENST00000593267 LOC105371045A0A1W2PR82 267 aa18.82■□□□□ 0.6
CACNA1A-213ENST00000593267 AQRO60306 1485 aaKnown RBP eCLIP18.82■□□□□ 0.6
CACNA1A-213ENST00000593267 GRIN2BQ13224 1484 aa18.8■□□□□ 0.6
CACNA1A-213ENST00000593267 RAPGEF2Q9Y4G8 1499 aa18.79■□□□□ 0.6
CACNA1A-213ENST00000593267 CARMIL1Q5VZK9 1371 aa18.77■□□□□ 0.6
CACNA1A-213ENST00000593267 ADAMTS12P58397 1594 aa18.76■□□□□ 0.59
CACNA1A-213ENST00000593267 ARHGEF11O15085 1522 aa18.75■□□□□ 0.59
CACNA1A-213ENST00000593267 TNIKQ9UKE5 1360 aa18.7■□□□□ 0.58
CACNA1A-213ENST00000593267 SNAPC4Q5SXM2 1469 aa18.7■□□□□ 0.58
CACNA1A-213ENST00000593267 MAGI1Q96QZ7 1491 aaPredicted RBP18.7■□□□□ 0.58
CACNA1A-213ENST00000593267 FHAD1B1AJZ9 1412 aa18.69■□□□□ 0.58
CACNA1A-213ENST00000593267 EHMT2Q96KQ7 1210 aa18.69■□□□□ 0.58
CACNA1A-213ENST00000593267 CHD1O14646 1710 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms