RNA–Protein interactions for RNA: ENST00000593013.5

HDAC5-212, Transcript of histone deacetylase 5, humanhuman

TSL 2

Gene HDAC5, Length 1,745 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-212ENST00000593013 NISCHQ9Y2I1 1504 aa42.13■■■■■ 4.34
HDAC5-212ENST00000593013 CCDC180Q9P1Z9 1646 aa37.08■■■■□ 3.53
HDAC5-212ENST00000593013 ABCC9O60706 1549 aa35.68■■■■□ 3.3
HDAC5-212ENST00000593013 ZCCHC6Q5VYS8 1495 aaKnown RBP35.26■■■■□ 3.24
HDAC5-212ENST00000593013 DCAF1Q9Y4B6 1507 aa34.89■■■■□ 3.18
HDAC5-212ENST00000593013 DCAF8L2P0C7V8 631 aa34.85■■■■□ 3.17
HDAC5-212ENST00000593013 MYO15BQ96JP2 1530 aa34.75■■■■□ 3.15
HDAC5-212ENST00000593013 NACADO15069 1562 aa34.69■■■■□ 3.14
HDAC5-212ENST00000593013 RB1CC1Q8TDY2 1594 aa34.52■■■■□ 3.12
HDAC5-212ENST00000593013 SCRIBQ14160 1630 aa33.91■■■■□ 3.02
HDAC5-212ENST00000593013 UNC13AQ9UPW8 1703 aa33.83■■■■□ 3.01
HDAC5-212ENST00000593013 SHROOM4Q9ULL8 1493 aa33.81■■■■□ 3
HDAC5-212ENST00000593013 BICRAQ9NZM4 1560 aa33.52■■■□□ 2.96
HDAC5-212ENST00000593013 PABPN1Q86U42 306 aaKnown RBP eCLIP33.39■■■□□ 2.94
HDAC5-212ENST00000593013 SUPT5HO00267 1087 aaKnown RBP32.8■■■□□ 2.84
HDAC5-212ENST00000593013 CECR2Q9BXF3 1484 aa32.76■■■□□ 2.84
HDAC5-212ENST00000593013 BAZ1AQ9NRL2 1556 aaPredicted RBP32.57■■■□□ 2.81
HDAC5-212ENST00000593013 EIF4G1Q04637 1599 aaKnown RBP32.56■■■□□ 2.8
HDAC5-212ENST00000593013 SMARCA4P51532 1647 aa32.52■■■□□ 2.8
HDAC5-212ENST00000593013 MROH2BQ7Z745 1585 aa32.5■■■□□ 2.79
HDAC5-212ENST00000593013 RSF1Q96T23 1441 aaPredicted RBP32.41■■■□□ 2.78
HDAC5-212ENST00000593013 CC2D2AQ9P2K1 1620 aa32.32■■■□□ 2.76
HDAC5-212ENST00000593013 DNAJC5BQ9UF47 199 aa32.28■■■□□ 2.76
HDAC5-212ENST00000593013 PEG3Q9GZU2 1588 aa32.2■■■□□ 2.75
HDAC5-212ENST00000593013 WIZO95785 1651 aa32.18■■■□□ 2.74
HDAC5-212ENST00000593013 ATAD2BQ9ULI0 1458 aa32.16■■■□□ 2.74
HDAC5-212ENST00000593013 SMARCA2P51531 1590 aa32.12■■■□□ 2.73
HDAC5-212ENST00000593013 NCAPD3P42695 1498 aa32.02■■■□□ 2.72
HDAC5-212ENST00000593013 HMGXB3Q12766 1538 aa31.91■■■□□ 2.7
HDAC5-212ENST00000593013 BAZ1BQ9UIG0 1483 aaKnown RBP31.9■■■□□ 2.7
HDAC5-212ENST00000593013 TOP2AP11388 1531 aaKnown RBP31.86■■■□□ 2.69
HDAC5-212ENST00000593013 CHIC1Q5VXU3 224 aa31.81■■■□□ 2.68
HDAC5-212ENST00000593013 CCDC88BA6NC98 1476 aa31.51■■■□□ 2.63
HDAC5-212ENST00000593013 CADPSQ9ULU8 1353 aa31.12■■■□□ 2.57
HDAC5-212ENST00000593013 CFTRP13569 1480 aa31.11■■■□□ 2.57
HDAC5-212ENST00000593013 NESP48681 1621 aa31.04■■■□□ 2.56
HDAC5-212ENST00000593013 LAMC3Q9Y6N6 1575 aa31.02■■■□□ 2.56
HDAC5-212ENST00000593013 PRDM2Q13029 1718 aa30.91■■■□□ 2.54
HDAC5-212ENST00000593013 TRIM41Q8WV44 630 aa30.81■■■□□ 2.52
HDAC5-212ENST00000593013 PDS5BQ9NTI5 1447 aa30.78■■■□□ 2.52
HDAC5-212ENST00000593013 FANCD2Q9BXW9 1451 aa30.76■■■□□ 2.51
HDAC5-212ENST00000593013 KIF21AQ7Z4S6 1674 aa30.72■■■□□ 2.51
HDAC5-212ENST00000593013 ERCC6Q03468 1493 aa30.72■■■□□ 2.51
HDAC5-212ENST00000593013 CEP164Q9UPV0 1460 aa30.62■■■□□ 2.49
HDAC5-212ENST00000593013 ABCC8Q09428 1581 aa30.59■■■□□ 2.49
HDAC5-212ENST00000593013 LOC105371045A0A1W2PR82 267 aa30.55■■■□□ 2.48
HDAC5-212ENST00000593013 WRNQ14191 1432 aaPredicted RBP eCLIP30.5■■■□□ 2.47
HDAC5-212ENST00000593013 THOC2Q8NI27 1593 aaKnown RBP30.49■■■□□ 2.47
HDAC5-212ENST00000593013 CUX1P39880 1505 aa30.44■■■□□ 2.46
HDAC5-212ENST00000593013 MRC2Q9UBG0 1479 aa30.43■■■□□ 2.46
HDAC5-212ENST00000593013 URB2Q14146 1524 aaKnown RBP30.43■■■□□ 2.46
HDAC5-212ENST00000593013 SYNJ1O43426 1573 aa30.41■■■□□ 2.46
HDAC5-212ENST00000593013 DNMBPQ6XZF7 1577 aa30.37■■■□□ 2.45
HDAC5-212ENST00000593013 TOP2BQ02880 1626 aa30.37■■■□□ 2.45
HDAC5-212ENST00000593013 TOPBP1Q92547 1522 aa30.36■■■□□ 2.45
HDAC5-212ENST00000593013 BIVM-ERCC5R4GMW8 1640 aa30.35■■■□□ 2.45
HDAC5-212ENST00000593013 WDR62O43379 1518 aa30.33■■■□□ 2.45
HDAC5-212ENST00000593013 FAM9AQ8IZU1 332 aaPredicted RBP30.23■■■□□ 2.43
HDAC5-212ENST00000593013 CUX2O14529 1486 aa30.22■■■□□ 2.43
HDAC5-212ENST00000593013 FGD5Q6ZNL6 1462 aa30.19■■■□□ 2.42
HDAC5-212ENST00000593013 POLA1P09884 1462 aaPredicted RBP30.17■■■□□ 2.42
HDAC5-212ENST00000593013 EEA1Q15075 1411 aa30.1■■■□□ 2.41
HDAC5-212ENST00000593013 SOGA1O94964 1423 aa30.04■■■□□ 2.4
HDAC5-212ENST00000593013 RAD54L2Q9Y4B4 1467 aa30.03■■■□□ 2.4
HDAC5-212ENST00000593013 TARBP1Q13395 1621 aaKnown RBP29.99■■■□□ 2.39
HDAC5-212ENST00000593013 IFT140Q96RY7 1462 aa29.95■■■□□ 2.39
HDAC5-212ENST00000593013 ABCA10Q8WWZ4 1543 aa29.95■■■□□ 2.38
HDAC5-212ENST00000593013 WDR97A6NE52 1622 aa29.91■■■□□ 2.38
HDAC5-212ENST00000593013 RUSC2Q8N2Y8 1516 aa29.85■■■□□ 2.37
HDAC5-212ENST00000593013 ZNF608Q9ULD9 1512 aaPredicted RBP29.8■■■□□ 2.36
HDAC5-212ENST00000593013 TDRD9Q8NDG6 1382 aaKnown RBP29.79■■■□□ 2.36
HDAC5-212ENST00000593013 KIF27Q86VH2 1401 aa29.79■■■□□ 2.36
HDAC5-212ENST00000593013 CSRNP3Q8WYN3 585 aa29.78■■■□□ 2.36
HDAC5-212ENST00000593013 PCGF6Q9BYE7 350 aa29.78■■■□□ 2.36
HDAC5-212ENST00000593013 ABCA5Q8WWZ7 1642 aa29.76■■■□□ 2.35
HDAC5-212ENST00000593013 KIF21BO75037 1637 aa29.73■■■□□ 2.35
HDAC5-212ENST00000593013 AQRO60306 1485 aaKnown RBP eCLIP29.73■■■□□ 2.351e-8■■■■□ 19.8
HDAC5-212ENST00000593013 EHMT2Q96KQ7 1210 aa29.72■■■□□ 2.35
HDAC5-212ENST00000593013 TNIKQ9UKE5 1360 aa29.72■■■□□ 2.35
HDAC5-212ENST00000593013 GOLGA3Q08378 1498 aa29.7■■■□□ 2.35
HDAC5-212ENST00000593013 GAPVD1Q14C86 1478 aa29.7■■■□□ 2.35
HDAC5-212ENST00000593013 EIF4G3O43432 1585 aaKnown RBP29.69■■■□□ 2.34
HDAC5-212ENST00000593013 TRIM26Q12899 539 aaPredicted RBP29.68■■■□□ 2.34
HDAC5-212ENST00000593013 IGF1RP08069 1367 aa29.63■■■□□ 2.33
HDAC5-212ENST00000593013 CEP162Q5TB80 1403 aa29.59■■■□□ 2.33
HDAC5-212ENST00000593013 ERICH3Q5RHP9 1530 aa29.59■■■□□ 2.33
HDAC5-212ENST00000593013 PBRM1Q86U86 1689 aa29.58■■■□□ 2.33
HDAC5-212ENST00000593013 GRIN2BQ13224 1484 aa29.58■■■□□ 2.33
HDAC5-212ENST00000593013 HRCP23327 699 aa29.5■■■□□ 2.31
HDAC5-212ENST00000593013 PRXQ9BXM0 1461 aa29.46■■■□□ 2.31
HDAC5-212ENST00000593013 CUL7Q14999 1698 aa29.45■■■□□ 2.3
HDAC5-212ENST00000593013 SNAPC4Q5SXM2 1469 aa29.44■■■□□ 2.3
HDAC5-212ENST00000593013 CARMIL1Q5VZK9 1371 aa29.44■■■□□ 2.3
HDAC5-212ENST00000593013 MAGI1Q96QZ7 1491 aaPredicted RBP29.42■■■□□ 2.3
HDAC5-212ENST00000593013 ADAMTS12P58397 1594 aa29.4■■■□□ 2.3
HDAC5-212ENST00000593013 UBTFP17480 764 aaKnown RBP29.39■■■□□ 2.3
HDAC5-212ENST00000593013 FHAD1B1AJZ9 1412 aa29.38■■■□□ 2.29
HDAC5-212ENST00000593013 RAPGEF2Q9Y4G8 1499 aa29.37■■■□□ 2.29
HDAC5-212ENST00000593013 SYNJ2O15056 1496 aa29.31■■■□□ 2.28
HDAC5-212ENST00000593013 CHD1O14646 1710 aa29.26■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms