RNA–Protein interactions for RNA: ENST00000592812.1

LDLRAD4-217, Transcript of low density lipoprotein receptor class A domain containing 4, humanhuman

TSL 4

Gene LDLRAD4, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD4-217ENST00000592812 NISCHQ9Y2I1 1504 aa29.28■■■□□ 2.28
LDLRAD4-217ENST00000592812 CCDC180Q9P1Z9 1646 aa25.73■■□□□ 1.71
LDLRAD4-217ENST00000592812 ABCC9O60706 1549 aa24.86■■□□□ 1.57
LDLRAD4-217ENST00000592812 DCAF8L2P0C7V8 631 aa24.53■■□□□ 1.52
LDLRAD4-217ENST00000592812 ZCCHC6Q5VYS8 1495 aaKnown RBP24.45■■□□□ 1.5
LDLRAD4-217ENST00000592812 DCAF1Q9Y4B6 1507 aa24.18■■□□□ 1.46
LDLRAD4-217ENST00000592812 NACADO15069 1562 aa24.13■■□□□ 1.45
LDLRAD4-217ENST00000592812 MYO15BQ96JP2 1530 aa24.09■■□□□ 1.45
LDLRAD4-217ENST00000592812 RB1CC1Q8TDY2 1594 aa24.05■■□□□ 1.44
LDLRAD4-217ENST00000592812 SCRIBQ14160 1630 aa23.62■■□□□ 1.37
LDLRAD4-217ENST00000592812 SHROOM4Q9ULL8 1493 aa23.6■■□□□ 1.37
LDLRAD4-217ENST00000592812 UNC13AQ9UPW8 1703 aa23.49■■□□□ 1.35
LDLRAD4-217ENST00000592812 PABPN1Q86U42 306 aaKnown RBP eCLIP23.42■■□□□ 1.34
LDLRAD4-217ENST00000592812 BICRAQ9NZM4 1560 aa23.29■■□□□ 1.32
LDLRAD4-217ENST00000592812 CECR2Q9BXF3 1484 aa22.81■■□□□ 1.24
LDLRAD4-217ENST00000592812 EIF4G1Q04637 1599 aaKnown RBP22.64■■□□□ 1.22
LDLRAD4-217ENST00000592812 BAZ1AQ9NRL2 1556 aaPredicted RBP22.64■■□□□ 1.22
LDLRAD4-217ENST00000592812 MROH2BQ7Z745 1585 aa22.6■■□□□ 1.21
LDLRAD4-217ENST00000592812 SMARCA4P51532 1647 aa22.6■■□□□ 1.21
LDLRAD4-217ENST00000592812 RSF1Q96T23 1441 aaPredicted RBP22.54■■□□□ 1.2
LDLRAD4-217ENST00000592812 SUPT5HO00267 1087 aaKnown RBP22.52■■□□□ 1.2
LDLRAD4-217ENST00000592812 CC2D2AQ9P2K1 1620 aa22.46■■□□□ 1.19
LDLRAD4-217ENST00000592812 DNAJC5BQ9UF47 199 aa22.44■■□□□ 1.18
LDLRAD4-217ENST00000592812 ATAD2BQ9ULI0 1458 aa22.39■■□□□ 1.17
LDLRAD4-217ENST00000592812 WIZO95785 1651 aa22.39■■□□□ 1.17
LDLRAD4-217ENST00000592812 SMARCA2P51531 1590 aa22.35■■□□□ 1.17
LDLRAD4-217ENST00000592812 PEG3Q9GZU2 1588 aa22.31■■□□□ 1.16
LDLRAD4-217ENST00000592812 NCAPD3P42695 1498 aa22.28■■□□□ 1.16
LDLRAD4-217ENST00000592812 BAZ1BQ9UIG0 1483 aaKnown RBP22.23■■□□□ 1.15
LDLRAD4-217ENST00000592812 HMGXB3Q12766 1538 aa22.16■■□□□ 1.14
LDLRAD4-217ENST00000592812 TOP2AP11388 1531 aaKnown RBP22.13■■□□□ 1.13
LDLRAD4-217ENST00000592812 CCDC88BA6NC98 1476 aa21.94■■□□□ 1.1
LDLRAD4-217ENST00000592812 AEBP2Q6ZN18 517 aaPredicted RBP21.9■■□□□ 1.1
LDLRAD4-217ENST00000592812 CADPSQ9ULU8 1353 aa21.71■■□□□ 1.07
LDLRAD4-217ENST00000592812 NESP48681 1621 aa21.65■■□□□ 1.06
LDLRAD4-217ENST00000592812 CFTRP13569 1480 aa21.64■■□□□ 1.05
LDLRAD4-217ENST00000592812 LAMC3Q9Y6N6 1575 aa21.58■■□□□ 1.05
LDLRAD4-217ENST00000592812 PDS5BQ9NTI5 1447 aa21.5■■□□□ 1.03
LDLRAD4-217ENST00000592812 PRDM2Q13029 1718 aa21.44■■□□□ 1.02
LDLRAD4-217ENST00000592812 FANCD2Q9BXW9 1451 aa21.44■■□□□ 1.02
LDLRAD4-217ENST00000592812 ERCC6Q03468 1493 aa21.39■■□□□ 1.01
LDLRAD4-217ENST00000592812 CEP164Q9UPV0 1460 aa21.35■■□□□ 1.01
LDLRAD4-217ENST00000592812 KIF21AQ7Z4S6 1674 aa21.34■■□□□ 1.01
LDLRAD4-217ENST00000592812 ABCC8Q09428 1581 aa21.27■■□□□ 1
LDLRAD4-217ENST00000592812 CHIC1Q5VXU3 224 aa21.25■□□□□ 0.99
LDLRAD4-217ENST00000592812 WRNQ14191 1432 aaPredicted RBP eCLIP21.24■□□□□ 0.99
LDLRAD4-217ENST00000592812 MRC2Q9UBG0 1479 aa21.21■□□□□ 0.99
LDLRAD4-217ENST00000592812 TRIM41Q8WV44 630 aa21.21■□□□□ 0.99
LDLRAD4-217ENST00000592812 URB2Q14146 1524 aaKnown RBP21.18■□□□□ 0.98
LDLRAD4-217ENST00000592812 CUX1P39880 1505 aa21.16■□□□□ 0.98
LDLRAD4-217ENST00000592812 TOPBP1Q92547 1522 aa21.14■□□□□ 0.98
LDLRAD4-217ENST00000592812 DNMBPQ6XZF7 1577 aa21.13■□□□□ 0.97
LDLRAD4-217ENST00000592812 SYNJ1O43426 1573 aa21.11■□□□□ 0.97
LDLRAD4-217ENST00000592812 THOC2Q8NI27 1593 aaKnown RBP21.1■□□□□ 0.97
LDLRAD4-217ENST00000592812 TOP2BQ02880 1626 aa21.08■□□□□ 0.97
LDLRAD4-217ENST00000592812 WDR62O43379 1518 aa21.08■□□□□ 0.96
LDLRAD4-217ENST00000592812 BIVM-ERCC5R4GMW8 1640 aa21.05■□□□□ 0.96
LDLRAD4-217ENST00000592812 FGD5Q6ZNL6 1462 aa21.02■□□□□ 0.96
LDLRAD4-217ENST00000592812 SOGA1O94964 1423 aa20.99■□□□□ 0.95
LDLRAD4-217ENST00000592812 POLA1P09884 1462 aaPredicted RBP20.98■□□□□ 0.95
LDLRAD4-217ENST00000592812 RAD54L2Q9Y4B4 1467 aa20.95■□□□□ 0.94
LDLRAD4-217ENST00000592812 CUX2O14529 1486 aa20.93■□□□□ 0.94
LDLRAD4-217ENST00000592812 IFT140Q96RY7 1462 aa20.88■□□□□ 0.93
LDLRAD4-217ENST00000592812 TARBP1Q13395 1621 aaKnown RBP20.83■□□□□ 0.93
LDLRAD4-217ENST00000592812 TDRD9Q8NDG6 1382 aaKnown RBP20.83■□□□□ 0.92
LDLRAD4-217ENST00000592812 FAM9AQ8IZU1 332 aaPredicted RBP20.82■□□□□ 0.92
LDLRAD4-217ENST00000592812 ABCA10Q8WWZ4 1543 aa20.82■□□□□ 0.92
LDLRAD4-217ENST00000592812 RUSC2Q8N2Y8 1516 aa20.77■□□□□ 0.92
LDLRAD4-217ENST00000592812 ZNF608Q9ULD9 1512 aaPredicted RBP20.77■□□□□ 0.92
LDLRAD4-217ENST00000592812 KIF27Q86VH2 1401 aa20.77■□□□□ 0.91
LDLRAD4-217ENST00000592812 AQRO60306 1485 aaKnown RBP eCLIP20.76■□□□□ 0.91
LDLRAD4-217ENST00000592812 WDR97A6NE52 1622 aa20.72■□□□□ 0.91
LDLRAD4-217ENST00000592812 GAPVD1Q14C86 1478 aa20.71■□□□□ 0.91
LDLRAD4-217ENST00000592812 CSRNP3Q8WYN3 585 aa20.69■□□□□ 0.9
LDLRAD4-217ENST00000592812 EEA1Q15075 1411 aa20.67■□□□□ 0.9
LDLRAD4-217ENST00000592812 IGF1RP08069 1367 aa20.65■□□□□ 0.9
LDLRAD4-217ENST00000592812 ABCA5Q8WWZ7 1642 aa20.64■□□□□ 0.9
LDLRAD4-217ENST00000592812 EIF4G3O43432 1585 aaKnown RBP20.63■□□□□ 0.89
LDLRAD4-217ENST00000592812 GRIN2BQ13224 1484 aa20.62■□□□□ 0.89
LDLRAD4-217ENST00000592812 PBRM1Q86U86 1689 aa20.57■□□□□ 0.88
LDLRAD4-217ENST00000592812 ERICH3Q5RHP9 1530 aa20.57■□□□□ 0.88
LDLRAD4-217ENST00000592812 EHMT2Q96KQ7 1210 aa20.55■□□□□ 0.88
LDLRAD4-217ENST00000592812 CARMIL1Q5VZK9 1371 aa20.55■□□□□ 0.88
LDLRAD4-217ENST00000592812 SNAPC4Q5SXM2 1469 aa20.53■□□□□ 0.88
LDLRAD4-217ENST00000592812 FBLN2P98095 1184 aa20.52■□□□□ 0.88
LDLRAD4-217ENST00000592812 CHMP7Q8WUX9 453 aaPredicted RBP20.5■□□□□ 0.87
LDLRAD4-217ENST00000592812 MAGI1Q96QZ7 1491 aaPredicted RBP20.49■□□□□ 0.87
LDLRAD4-217ENST00000592812 FHAD1B1AJZ9 1412 aa20.48■□□□□ 0.87
LDLRAD4-217ENST00000592812 LOC105371045A0A1W2PR82 267 aa20.46■□□□□ 0.87
LDLRAD4-217ENST00000592812 CUL7Q14999 1698 aa20.45■□□□□ 0.86
LDLRAD4-217ENST00000592812 PRXQ9BXM0 1461 aa20.45■□□□□ 0.86
LDLRAD4-217ENST00000592812 RAPGEF2Q9Y4G8 1499 aa20.44■□□□□ 0.86
LDLRAD4-217ENST00000592812 ADAMTS12P58397 1594 aa20.42■□□□□ 0.86
LDLRAD4-217ENST00000592812 SYNJ2O15056 1496 aa20.42■□□□□ 0.86
LDLRAD4-217ENST00000592812 UBTFP17480 764 aaKnown RBP20.41■□□□□ 0.86
LDLRAD4-217ENST00000592812 KIF21BO75037 1637 aa20.38■□□□□ 0.85
LDLRAD4-217ENST00000592812 GOLGA3Q08378 1498 aa20.35■□□□□ 0.85
LDLRAD4-217ENST00000592812 GRIN2AQ12879 1464 aa20.34■□□□□ 0.85
LDLRAD4-217ENST00000592812 CHD1O14646 1710 aa20.32■□□□□ 0.84
LDLRAD4-217ENST00000592812 OSCARQ8IYS5 282 aa20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms