RNA–Protein interactions for RNA: ENST00000592642.1

TRIM65-206, Transcript of tripartite motif containing 65, humanhuman

TSL 3

Gene TRIM65, Length 396 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM65-206ENST00000592642 NISCHQ9Y2I1 1504 aa23.6■■□□□ 1.37
TRIM65-206ENST00000592642 CCDC180Q9P1Z9 1646 aa20.58■□□□□ 0.89
TRIM65-206ENST00000592642 ZCCHC6Q5VYS8 1495 aaKnown RBP19.8■□□□□ 0.76
TRIM65-206ENST00000592642 ABCC9O60706 1549 aa19.71■□□□□ 0.75
TRIM65-206ENST00000592642 DCAF1Q9Y4B6 1507 aa19.55■□□□□ 0.72
TRIM65-206ENST00000592642 DCAF8L2P0C7V8 631 aa19.45■□□□□ 0.7
TRIM65-206ENST00000592642 MYO15BQ96JP2 1530 aa19.42■□□□□ 0.7
TRIM65-206ENST00000592642 NACADO15069 1562 aa19.29■□□□□ 0.68
TRIM65-206ENST00000592642 RB1CC1Q8TDY2 1594 aa19.15■□□□□ 0.66
TRIM65-206ENST00000592642 SHROOM4Q9ULL8 1493 aa19.03■□□□□ 0.64
TRIM65-206ENST00000592642 SCRIBQ14160 1630 aa18.9■□□□□ 0.62
TRIM65-206ENST00000592642 BICRAQ9NZM4 1560 aa18.6■□□□□ 0.57
TRIM65-206ENST00000592642 PABPN1Q86U42 306 aaKnown RBP eCLIP18.57■□□□□ 0.56
TRIM65-206ENST00000592642 UNC13AQ9UPW8 1703 aa18.57■□□□□ 0.56
TRIM65-206ENST00000592642 CECR2Q9BXF3 1484 aa18.36■□□□□ 0.53
TRIM65-206ENST00000592642 RSF1Q96T23 1441 aaPredicted RBP18.25■□□□□ 0.51
TRIM65-206ENST00000592642 MROH2BQ7Z745 1585 aa18.21■□□□□ 0.51
TRIM65-206ENST00000592642 BAZ1AQ9NRL2 1556 aaPredicted RBP18.21■□□□□ 0.51
TRIM65-206ENST00000592642 SUPT5HO00267 1087 aaKnown RBP18.19■□□□□ 0.5
TRIM65-206ENST00000592642 SMARCA4P51532 1647 aa18.13■□□□□ 0.49
TRIM65-206ENST00000592642 EIF4G1Q04637 1599 aaKnown RBP18.04■□□□□ 0.48
TRIM65-206ENST00000592642 PEG3Q9GZU2 1588 aa17.98■□□□□ 0.47
TRIM65-206ENST00000592642 ATAD2BQ9ULI0 1458 aa17.97■□□□□ 0.47
TRIM65-206ENST00000592642 WIZO95785 1651 aa17.95■□□□□ 0.46
TRIM65-206ENST00000592642 SMARCA2P51531 1590 aa17.9■□□□□ 0.46
TRIM65-206ENST00000592642 NCAPD3P42695 1498 aa17.87■□□□□ 0.45
TRIM65-206ENST00000592642 TOP2AP11388 1531 aaKnown RBP17.86■□□□□ 0.45
TRIM65-206ENST00000592642 BAZ1BQ9UIG0 1483 aaKnown RBP17.81■□□□□ 0.44
TRIM65-206ENST00000592642 CC2D2AQ9P2K1 1620 aa17.8■□□□□ 0.44
TRIM65-206ENST00000592642 HMGXB3Q12766 1538 aa17.78■□□□□ 0.44
TRIM65-206ENST00000592642 CCDC88BA6NC98 1476 aa17.69■□□□□ 0.42
TRIM65-206ENST00000592642 DNAJC5BQ9UF47 199 aa17.65■□□□□ 0.42
TRIM65-206ENST00000592642 CFTRP13569 1480 aa17.4■□□□□ 0.38
TRIM65-206ENST00000592642 CADPSQ9ULU8 1353 aa17.39■□□□□ 0.37
TRIM65-206ENST00000592642 CHIC1Q5VXU3 224 aa17.38■□□□□ 0.37
TRIM65-206ENST00000592642 NESP48681 1621 aa17.24■□□□□ 0.35
TRIM65-206ENST00000592642 LAMC3Q9Y6N6 1575 aa17.21■□□□□ 0.35
TRIM65-206ENST00000592642 ABCC8Q09428 1581 aa17.17■□□□□ 0.34
TRIM65-206ENST00000592642 WRNQ14191 1432 aaPredicted RBP eCLIP17.16■□□□□ 0.34
TRIM65-206ENST00000592642 FANCD2Q9BXW9 1451 aa17.16■□□□□ 0.34
TRIM65-206ENST00000592642 TRIM41Q8WV44 630 aa17.14■□□□□ 0.33
TRIM65-206ENST00000592642 PDS5BQ9NTI5 1447 aa17.13■□□□□ 0.33
TRIM65-206ENST00000592642 SYNJ1O43426 1573 aa17.05■□□□□ 0.32
TRIM65-206ENST00000592642 CUX1P39880 1505 aa17.05■□□□□ 0.32
TRIM65-206ENST00000592642 CEP164Q9UPV0 1460 aa17.05■□□□□ 0.32
TRIM65-206ENST00000592642 PRDM2Q13029 1718 aa17.04■□□□□ 0.32
TRIM65-206ENST00000592642 TOP2BQ02880 1626 aa16.99■□□□□ 0.31
TRIM65-206ENST00000592642 URB2Q14146 1524 aaKnown RBP16.96■□□□□ 0.31
TRIM65-206ENST00000592642 BIVM-ERCC5R4GMW8 1640 aa16.95■□□□□ 0.3
TRIM65-206ENST00000592642 TOPBP1Q92547 1522 aa16.95■□□□□ 0.3
TRIM65-206ENST00000592642 DNMBPQ6XZF7 1577 aa16.94■□□□□ 0.3
TRIM65-206ENST00000592642 MRC2Q9UBG0 1479 aa16.93■□□□□ 0.3
TRIM65-206ENST00000592642 ERCC6Q03468 1493 aa16.91■□□□□ 0.3
TRIM65-206ENST00000592642 KIF21AQ7Z4S6 1674 aa16.9■□□□□ 0.3
TRIM65-206ENST00000592642 FGD5Q6ZNL6 1462 aa16.88■□□□□ 0.29
TRIM65-206ENST00000592642 SOGA1O94964 1423 aa16.87■□□□□ 0.29
TRIM65-206ENST00000592642 POLA1P09884 1462 aaPredicted RBP16.86■□□□□ 0.29
TRIM65-206ENST00000592642 WDR62O43379 1518 aa16.84■□□□□ 0.29
TRIM65-206ENST00000592642 EEA1Q15075 1411 aa16.81■□□□□ 0.28
TRIM65-206ENST00000592642 THOC2Q8NI27 1593 aaKnown RBP16.8■□□□□ 0.28
TRIM65-206ENST00000592642 RUSC2Q8N2Y8 1516 aa16.8■□□□□ 0.28
TRIM65-206ENST00000592642 FAM9AQ8IZU1 332 aaPredicted RBP16.79■□□□□ 0.28
TRIM65-206ENST00000592642 RAD54L2Q9Y4B4 1467 aa16.79■□□□□ 0.28
TRIM65-206ENST00000592642 ABCA10Q8WWZ4 1543 aa16.77■□□□□ 0.28
TRIM65-206ENST00000592642 CUX2O14529 1486 aa16.76■□□□□ 0.27
TRIM65-206ENST00000592642 KIF27Q86VH2 1401 aa16.74■□□□□ 0.27
TRIM65-206ENST00000592642 CSRNP3Q8WYN3 585 aa16.72■□□□□ 0.27
TRIM65-206ENST00000592642 IFT140Q96RY7 1462 aa16.69■□□□□ 0.26
TRIM65-206ENST00000592642 TARBP1Q13395 1621 aaKnown RBP16.67■□□□□ 0.26
TRIM65-206ENST00000592642 IGF1RP08069 1367 aa16.65■□□□□ 0.26
TRIM65-206ENST00000592642 LOC105371045A0A1W2PR82 267 aa16.65■□□□□ 0.26
TRIM65-206ENST00000592642 TDRD9Q8NDG6 1382 aaKnown RBP16.64■□□□□ 0.26
TRIM65-206ENST00000592642 WDR97A6NE52 1622 aa16.62■□□□□ 0.25
TRIM65-206ENST00000592642 PRXQ9BXM0 1461 aa16.61■□□□□ 0.25
TRIM65-206ENST00000592642 ZNF608Q9ULD9 1512 aaPredicted RBP16.6■□□□□ 0.25
TRIM65-206ENST00000592642 GAPVD1Q14C86 1478 aa16.59■□□□□ 0.25
TRIM65-206ENST00000592642 ABCA5Q8WWZ7 1642 aa16.59■□□□□ 0.25
TRIM65-206ENST00000592642 AQRO60306 1485 aaKnown RBP eCLIP16.57■□□□□ 0.241e-8■■■■□ 25.6
TRIM65-206ENST00000592642 CARMIL1Q5VZK9 1371 aa16.54■□□□□ 0.24
TRIM65-206ENST00000592642 KIF21BO75037 1637 aa16.54■□□□□ 0.24
TRIM65-206ENST00000592642 ERICH3Q5RHP9 1530 aa16.54■□□□□ 0.24
TRIM65-206ENST00000592642 GOLGA3Q08378 1498 aa16.54■□□□□ 0.24
TRIM65-206ENST00000592642 RAPGEF2Q9Y4G8 1499 aa16.54■□□□□ 0.24
TRIM65-206ENST00000592642 GRIN2BQ13224 1484 aa16.52■□□□□ 0.23
TRIM65-206ENST00000592642 EHMT2Q96KQ7 1210 aa16.51■□□□□ 0.23
TRIM65-206ENST00000592642 TNIKQ9UKE5 1360 aa16.48■□□□□ 0.23
TRIM65-206ENST00000592642 EIF4G3O43432 1585 aaKnown RBP16.47■□□□□ 0.23
TRIM65-206ENST00000592642 FHAD1B1AJZ9 1412 aa16.45■□□□□ 0.22
TRIM65-206ENST00000592642 UBTFP17480 764 aaKnown RBP16.43■□□□□ 0.22
TRIM65-206ENST00000592642 SNAPC4Q5SXM2 1469 aa16.42■□□□□ 0.22
TRIM65-206ENST00000592642 CUL7Q14999 1698 aa16.42■□□□□ 0.22
TRIM65-206ENST00000592642 ADAMTS12P58397 1594 aa16.4■□□□□ 0.22
TRIM65-206ENST00000592642 MAGI1Q96QZ7 1491 aaPredicted RBP16.4■□□□□ 0.22
TRIM65-206ENST00000592642 PBRM1Q86U86 1689 aa16.37■□□□□ 0.21
TRIM65-206ENST00000592642 CEP162Q5TB80 1403 aa16.35■□□□□ 0.21
TRIM65-206ENST00000592642 SYNJ2O15056 1496 aa16.33■□□□□ 0.2
TRIM65-206ENST00000592642 GRIN2AQ12879 1464 aa16.3■□□□□ 0.2
TRIM65-206ENST00000592642 CHMP7Q8WUX9 453 aaPredicted RBP16.28■□□□□ 0.2
TRIM65-206ENST00000592642 CLIP1P30622 1438 aa16.28■□□□□ 0.2
TRIM65-206ENST00000592642 NUP160Q12769 1436 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms