RNA–Protein interactions for RNA: ENST00000592526.1

RBM42-207, Transcript of RNA binding motif protein 42, humanhuman

TSL 2

Gene RBM42, Length 1,012 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM42-207ENST00000592526 NISCHQ9Y2I1 1504 aa50.12■■■■■ 5.61
RBM42-207ENST00000592526 CCDC180Q9P1Z9 1646 aa44.44■■■■■ 4.7
RBM42-207ENST00000592526 ABCC9O60706 1549 aa43.33■■■■■ 4.53
RBM42-207ENST00000592526 NACADO15069 1562 aa41.84■■■■■ 4.29
RBM42-207ENST00000592526 RB1CC1Q8TDY2 1594 aa41.81■■■■■ 4.28
RBM42-207ENST00000592526 DCAF8L2P0C7V8 631 aa41.77■■■■■ 4.28
RBM42-207ENST00000592526 ZCCHC6Q5VYS8 1495 aaKnown RBP41.77■■■■■ 4.28
RBM42-207ENST00000592526 MYO15BQ96JP2 1530 aa41.74■■■■■ 4.27
RBM42-207ENST00000592526 DCAF1Q9Y4B6 1507 aa41.57■■■■■ 4.25
RBM42-207ENST00000592526 UNC13AQ9UPW8 1703 aa40.64■■■■■ 4.1
RBM42-207ENST00000592526 PABPN1Q86U42 306 aaKnown RBP eCLIP40.55■■■■■ 4.08
RBM42-207ENST00000592526 BICRAQ9NZM4 1560 aa40.5■■■■■ 4.07
RBM42-207ENST00000592526 SCRIBQ14160 1630 aa40.46■■■■■ 4.07
RBM42-207ENST00000592526 SHROOM4Q9ULL8 1493 aa40.26■■■■■ 4.04
RBM42-207ENST00000592526 DNAJC5BQ9UF47 199 aa39.73■■■■□ 3.95
RBM42-207ENST00000592526 EIF4G1Q04637 1599 aaKnown RBP39.43■■■■□ 3.9
RBM42-207ENST00000592526 CC2D2AQ9P2K1 1620 aa39.21■■■■□ 3.87
RBM42-207ENST00000592526 CECR2Q9BXF3 1484 aa38.98■■■■□ 3.83
RBM42-207ENST00000592526 BAZ1AQ9NRL2 1556 aaPredicted RBP38.84■■■■□ 3.81
RBM42-207ENST00000592526 SMARCA4P51532 1647 aa38.79■■■■□ 3.8
RBM42-207ENST00000592526 NCAPD3P42695 1498 aa38.67■■■■□ 3.78
RBM42-207ENST00000592526 ATAD2BQ9ULI0 1458 aa38.64■■■■□ 3.78
RBM42-207ENST00000592526 SMARCA2P51531 1590 aa38.59■■■■□ 3.77
RBM42-207ENST00000592526 MROH2BQ7Z745 1585 aa38.57■■■■□ 3.77
RBM42-207ENST00000592526 PEG3Q9GZU2 1588 aa38.51■■■■□ 3.76
RBM42-207ENST00000592526 HMGXB3Q12766 1538 aa38.41■■■■□ 3.74
RBM42-207ENST00000592526 BAZ1BQ9UIG0 1483 aaKnown RBP38.29■■■■□ 3.72
RBM42-207ENST00000592526 RSF1Q96T23 1441 aaPredicted RBP38.25■■■■□ 3.71
RBM42-207ENST00000592526 WIZO95785 1651 aa38.08■■■■□ 3.69
RBM42-207ENST00000592526 TOP2AP11388 1531 aaKnown RBP37.78■■■■□ 3.64
RBM42-207ENST00000592526 LAMC3Q9Y6N6 1575 aa37.54■■■■□ 3.6
RBM42-207ENST00000592526 CADPSQ9ULU8 1353 aa37.53■■■■□ 3.6
RBM42-207ENST00000592526 NESP48681 1621 aa37.52■■■■□ 3.6
RBM42-207ENST00000592526 ERCC6Q03468 1493 aa37.38■■■■□ 3.57
RBM42-207ENST00000592526 CCDC88BA6NC98 1476 aa37.36■■■■□ 3.57
RBM42-207ENST00000592526 PDS5BQ9NTI5 1447 aa37.36■■■■□ 3.57
RBM42-207ENST00000592526 CFTRP13569 1480 aa37.32■■■■□ 3.56
RBM42-207ENST00000592526 SUPT5HO00267 1087 aaKnown RBP37.29■■■■□ 3.56
RBM42-207ENST00000592526 CUX2O14529 1486 aa37.02■■■■□ 3.52
RBM42-207ENST00000592526 FANCD2Q9BXW9 1451 aa37.02■■■■□ 3.52
RBM42-207ENST00000592526 KIF21AQ7Z4S6 1674 aa36.99■■■■□ 3.51
RBM42-207ENST00000592526 CEP164Q9UPV0 1460 aa36.95■■■■□ 3.51
RBM42-207ENST00000592526 THOC2Q8NI27 1593 aaKnown RBP36.92■■■■□ 3.5
RBM42-207ENST00000592526 MRC2Q9UBG0 1479 aa36.89■■■■□ 3.5
RBM42-207ENST00000592526 PRDM2Q13029 1718 aa36.82■■■■□ 3.48
RBM42-207ENST00000592526 WDR62O43379 1518 aa36.75■■■■□ 3.47
RBM42-207ENST00000592526 URB2Q14146 1524 aaKnown RBP36.61■■■■□ 3.45
RBM42-207ENST00000592526 ABCC8Q09428 1581 aa36.55■■■■□ 3.44
RBM42-207ENST00000592526 TOPBP1Q92547 1522 aa36.43■■■■□ 3.42
RBM42-207ENST00000592526 DNMBPQ6XZF7 1577 aa36.39■■■■□ 3.42
RBM42-207ENST00000592526 IFT140Q96RY7 1462 aa36.23■■■■□ 3.39
RBM42-207ENST00000592526 CUX1P39880 1505 aa36.18■■■■□ 3.38
RBM42-207ENST00000592526 POLA1P09884 1462 aaPredicted RBP36.13■■■■□ 3.37
RBM42-207ENST00000592526 WRNQ14191 1432 aaPredicted RBP eCLIP36.05■■■■□ 3.36
RBM42-207ENST00000592526 SOGA1O94964 1423 aa36.04■■■■□ 3.36
RBM42-207ENST00000592526 FGD5Q6ZNL6 1462 aa36.04■■■■□ 3.36
RBM42-207ENST00000592526 TARBP1Q13395 1621 aaKnown RBP36■■■■□ 3.35
RBM42-207ENST00000592526 ZNF608Q9ULD9 1512 aaPredicted RBP35.96■■■■□ 3.35
RBM42-207ENST00000592526 RAD54L2Q9Y4B4 1467 aa35.93■■■■□ 3.34
RBM42-207ENST00000592526 TOP2BQ02880 1626 aa35.91■■■■□ 3.34
RBM42-207ENST00000592526 BIVM-ERCC5R4GMW8 1640 aa35.86■■■■□ 3.33
RBM42-207ENST00000592526 SYNJ1O43426 1573 aa35.85■■■■□ 3.33
RBM42-207ENST00000592526 AQRO60306 1485 aaKnown RBP eCLIP35.81■■■■□ 3.327e-9■■■■□ 20.6
RBM42-207ENST00000592526 WDR97A6NE52 1622 aa35.81■■■■□ 3.32
RBM42-207ENST00000592526 DNAJC5Q9H3Z4 198 aa35.79■■■■□ 3.32
RBM42-207ENST00000592526 TDRD9Q8NDG6 1382 aaKnown RBP35.78■■■■□ 3.32
RBM42-207ENST00000592526 EIF4G3O43432 1585 aaKnown RBP35.77■■■■□ 3.32
RBM42-207ENST00000592526 ABCA10Q8WWZ4 1543 aa35.77■■■■□ 3.32
RBM42-207ENST00000592526 GRIN2BQ13224 1484 aa35.6■■■■□ 3.29
RBM42-207ENST00000592526 GAPVD1Q14C86 1478 aa35.6■■■■□ 3.29
RBM42-207ENST00000592526 OSCARQ8IYS5 282 aa35.56■■■■□ 3.28
RBM42-207ENST00000592526 ABCA5Q8WWZ7 1642 aa35.52■■■■□ 3.28
RBM42-207ENST00000592526 MAGI1Q96QZ7 1491 aaPredicted RBP35.49■■■■□ 3.27
RBM42-207ENST00000592526 SNAPC4Q5SXM2 1469 aa35.46■■■■□ 3.27
RBM42-207ENST00000592526 CHMP7Q8WUX9 453 aaPredicted RBP35.35■■■■□ 3.25
RBM42-207ENST00000592526 SYNJ2O15056 1496 aa35.35■■■■□ 3.25
RBM42-207ENST00000592526 PBRM1Q86U86 1689 aa35.34■■■■□ 3.25
RBM42-207ENST00000592526 ERICH3Q5RHP9 1530 aa35.34■■■■□ 3.25
RBM42-207ENST00000592526 FBLN2P98095 1184 aa35.34■■■■□ 3.25
RBM42-207ENST00000592526 KIF27Q86VH2 1401 aa35.32■■■■□ 3.25
RBM42-207ENST00000592526 TRIM41Q8WV44 630 aa35.31■■■■□ 3.24
RBM42-207ENST00000592526 FHAD1B1AJZ9 1412 aa35.23■■■■□ 3.23
RBM42-207ENST00000592526 CHD1O14646 1710 aa35.22■■■■□ 3.23
RBM42-207ENST00000592526 IGF1RP08069 1367 aa35.19■■■■□ 3.22
RBM42-207ENST00000592526 ADAMTS12P58397 1594 aa35.17■■■■□ 3.22
RBM42-207ENST00000592526 GRIN2AQ12879 1464 aa35.11■■■■□ 3.21
RBM42-207ENST00000592526 CLASP1Q7Z460 1538 aa35■■■■□ 3.19
RBM42-207ENST00000592526 NUP160Q12769 1436 aa34.99■■■■□ 3.19
RBM42-207ENST00000592526 CUL7Q14999 1698 aa34.97■■■■□ 3.19
RBM42-207ENST00000592526 CARMIL1Q5VZK9 1371 aa34.96■■■■□ 3.19
RBM42-207ENST00000592526 CHIC1Q5VXU3 224 aa34.95■■■■□ 3.19
RBM42-207ENST00000592526 RUSC2Q8N2Y8 1516 aa34.91■■■■□ 3.18
RBM42-207ENST00000592526 CEP170Q5SW79 1584 aa34.86■■■■□ 3.17
RBM42-207ENST00000592526 ARHGEF11O15085 1522 aa34.86■■■■□ 3.17
RBM42-207ENST00000592526 RIMBP3CA6NJZ7 1639 aa34.78■■■■□ 3.16
RBM42-207ENST00000592526 RIMBP3BA6NNM3 1639 aa34.78■■■■□ 3.16
RBM42-207ENST00000592526 RIMBP3Q9UFD9 1639 aa34.78■■■■□ 3.16
RBM42-207ENST00000592526 EEA1Q15075 1411 aa34.78■■■■□ 3.16
RBM42-207ENST00000592526 RAPGEF2Q9Y4G8 1499 aa34.74■■■■□ 3.15
RBM42-207ENST00000592526 KIAA0586Q9BVV6 1533 aa34.71■■■■□ 3.15
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms