RNA–Protein interactions for RNA: ENST00000592462.5

ITGA2B-209, Transcript of integrin subunit alpha 2b, humanhuman

TSL 5

Gene ITGA2B, Length 3,189 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA2B-209ENST00000592462 NISCHQ9Y2I1 1504 aa39.24■■■■□ 3.87
ITGA2B-209ENST00000592462 CCDC180Q9P1Z9 1646 aa33.72■■■□□ 2.99
ITGA2B-209ENST00000592462 DCAF8L2P0C7V8 631 aa33.27■■■□□ 2.92
ITGA2B-209ENST00000592462 SHROOM4Q9ULL8 1493 aa33.1■■■□□ 2.89
ITGA2B-209ENST00000592462 ZCCHC6Q5VYS8 1495 aaKnown RBP32.96■■■□□ 2.87
ITGA2B-209ENST00000592462 ABCC9O60706 1549 aa32.47■■■□□ 2.79
ITGA2B-209ENST00000592462 DCAF1Q9Y4B6 1507 aa32.01■■■□□ 2.71
ITGA2B-209ENST00000592462 SUPT5HO00267 1087 aaKnown RBP31.95■■■□□ 2.7
ITGA2B-209ENST00000592462 SCRIBQ14160 1630 aa31.72■■■□□ 2.67
ITGA2B-209ENST00000592462 NACADO15069 1562 aa31.45■■■□□ 2.63
ITGA2B-209ENST00000592462 MYO15BQ96JP2 1530 aa31.42■■■□□ 2.62
ITGA2B-209ENST00000592462 RB1CC1Q8TDY2 1594 aa31.23■■■□□ 2.59
ITGA2B-209ENST00000592462 PABPN1Q86U42 306 aaKnown RBP eCLIP30.92■■■□□ 2.54
ITGA2B-209ENST00000592462 CECR2Q9BXF3 1484 aa30.82■■■□□ 2.53
ITGA2B-209ENST00000592462 UNC13AQ9UPW8 1703 aa30.81■■■□□ 2.52
ITGA2B-209ENST00000592462 RSF1Q96T23 1441 aaPredicted RBP30.71■■■□□ 2.51
ITGA2B-209ENST00000592462 MROH2BQ7Z745 1585 aa30.55■■■□□ 2.48
ITGA2B-209ENST00000592462 BICRAQ9NZM4 1560 aa30.44■■■□□ 2.46
ITGA2B-209ENST00000592462 CHIC1Q5VXU3 224 aa30.36■■■□□ 2.45
ITGA2B-209ENST00000592462 WIZO95785 1651 aa30.36■■■□□ 2.45
ITGA2B-209ENST00000592462 BAZ1AQ9NRL2 1556 aaPredicted RBP30.2■■■□□ 2.42
ITGA2B-209ENST00000592462 SMARCA4P51532 1647 aa30.12■■■□□ 2.41
ITGA2B-209ENST00000592462 TOP2AP11388 1531 aaKnown RBP29.74■■■□□ 2.35
ITGA2B-209ENST00000592462 TRIM41Q8WV44 630 aa29.7■■■□□ 2.35
ITGA2B-209ENST00000592462 CCDC88BA6NC98 1476 aa29.68■■■□□ 2.34
ITGA2B-209ENST00000592462 FAM9AQ8IZU1 332 aaPredicted RBP29.63■■■□□ 2.33
ITGA2B-209ENST00000592462 ATAD2BQ9ULI0 1458 aa29.61■■■□□ 2.33
ITGA2B-209ENST00000592462 LOC105371045A0A1W2PR82 267 aa29.59■■■□□ 2.33
ITGA2B-209ENST00000592462 SMARCA2P51531 1590 aa29.59■■■□□ 2.33
ITGA2B-209ENST00000592462 EHMT2Q96KQ7 1210 aa29.58■■■□□ 2.33
ITGA2B-209ENST00000592462 EIF4G1Q04637 1599 aaKnown RBP29.53■■■□□ 2.32
ITGA2B-209ENST00000592462 BAZ1BQ9UIG0 1483 aaKnown RBP29.51■■■□□ 2.32
ITGA2B-209ENST00000592462 PEG3Q9GZU2 1588 aa29.44■■■□□ 2.3
ITGA2B-209ENST00000592462 ABCC8Q09428 1581 aa29.38■■■□□ 2.29
ITGA2B-209ENST00000592462 NCAPD3P42695 1498 aa29.13■■■□□ 2.25
ITGA2B-209ENST00000592462 CC2D2AQ9P2K1 1620 aa29.1■■■□□ 2.25
ITGA2B-209ENST00000592462 HMGXB3Q12766 1538 aa29.01■■■□□ 2.24
ITGA2B-209ENST00000592462 DNAJC5BQ9UF47 199 aa28.93■■■□□ 2.22
ITGA2B-209ENST00000592462 WRNQ14191 1432 aaPredicted RBP eCLIP28.9■■■□□ 2.22
ITGA2B-209ENST00000592462 SOGA1O94964 1423 aa28.87■■■□□ 2.21
ITGA2B-209ENST00000592462 RUSC2Q8N2Y8 1516 aa28.83■■■□□ 2.21
ITGA2B-209ENST00000592462 SYNJ1O43426 1573 aa28.82■■■□□ 2.2
ITGA2B-209ENST00000592462 CFTRP13569 1480 aa28.65■■■□□ 2.18
ITGA2B-209ENST00000592462 NESP48681 1621 aa28.6■■■□□ 2.17
ITGA2B-209ENST00000592462 CADPSQ9ULU8 1353 aa28.58■■■□□ 2.17
ITGA2B-209ENST00000592462 CSRNP3Q8WYN3 585 aa28.56■■■□□ 2.16
ITGA2B-209ENST00000592462 PCGF6Q9BYE7 350 aa28.52■■■□□ 2.16
ITGA2B-209ENST00000592462 UBTFP17480 764 aaKnown RBP28.5■■■□□ 2.15
ITGA2B-209ENST00000592462 PPARGC1BQ86YN6 1023 aaKnown RBP28.5■■■□□ 2.15
ITGA2B-209ENST00000592462 CUX1P39880 1505 aa28.49■■■□□ 2.15
ITGA2B-209ENST00000592462 RANGAP1P46060 587 aaPredicted RBP28.46■■■□□ 2.15
ITGA2B-209ENST00000592462 TOP2BQ02880 1626 aa28.45■■■□□ 2.14
ITGA2B-209ENST00000592462 FANCD2Q9BXW9 1451 aa28.34■■■□□ 2.13
ITGA2B-209ENST00000592462 BIVM-ERCC5R4GMW8 1640 aa28.32■■■□□ 2.12
ITGA2B-209ENST00000592462 TTBK1Q5TCY1 1321 aaPredicted RBP28.31■■■□□ 2.12
ITGA2B-209ENST00000592462 PRDM2Q13029 1718 aa28.29■■■□□ 2.12
ITGA2B-209ENST00000592462 EEA1Q15075 1411 aa28.27■■■□□ 2.12
ITGA2B-209ENST00000592462 RAPGEF2Q9Y4G8 1499 aa28.19■■■□□ 2.1
ITGA2B-209ENST00000592462 CEP162Q5TB80 1403 aa28.19■■■□□ 2.1
ITGA2B-209ENST00000592462 GOLGA3Q08378 1498 aa28.18■■■□□ 2.1
ITGA2B-209ENST00000592462 FGD5Q6ZNL6 1462 aa28.17■■■□□ 2.1
ITGA2B-209ENST00000592462 CUX2O14529 1486 aa28.11■■■□□ 2.09
ITGA2B-209ENST00000592462 TNIKQ9UKE5 1360 aa28.11■■■□□ 2.09
ITGA2B-209ENST00000592462 CEP164Q9UPV0 1460 aa28.1■■■□□ 2.09
ITGA2B-209ENST00000592462 RAD54L2Q9Y4B4 1467 aa28.1■■■□□ 2.09
ITGA2B-209ENST00000592462 KIF27Q86VH2 1401 aa28.07■■■□□ 2.08
ITGA2B-209ENST00000592462 LAMC3Q9Y6N6 1575 aa28.06■■■□□ 2.08
ITGA2B-209ENST00000592462 TOPBP1Q92547 1522 aa28.02■■■□□ 2.08
ITGA2B-209ENST00000592462 KIF21AQ7Z4S6 1674 aa28.01■■■□□ 2.07
ITGA2B-209ENST00000592462 TRIM26Q12899 539 aaPredicted RBP28■■■□□ 2.07
ITGA2B-209ENST00000592462 KIF21BO75037 1637 aa28■■■□□ 2.07
ITGA2B-209ENST00000592462 URB2Q14146 1524 aaKnown RBP27.99■■■□□ 2.07
ITGA2B-209ENST00000592462 PDS5BQ9NTI5 1447 aa27.98■■■□□ 2.07
ITGA2B-209ENST00000592462 POLA1P09884 1462 aaPredicted RBP27.96■■■□□ 2.07
ITGA2B-209ENST00000592462 DNMBPQ6XZF7 1577 aa27.95■■■□□ 2.07
ITGA2B-209ENST00000592462 PRXQ9BXM0 1461 aa27.89■■■□□ 2.06
ITGA2B-209ENST00000592462 CLIP1P30622 1438 aa27.89■■■□□ 2.06
ITGA2B-209ENST00000592462 IGF1RP08069 1367 aa27.88■■■□□ 2.05
ITGA2B-209ENST00000592462 TDRD9Q8NDG6 1382 aaKnown RBP27.86■■■□□ 2.05
ITGA2B-209ENST00000592462 CARMIL1Q5VZK9 1371 aa27.78■■■□□ 2.04
ITGA2B-209ENST00000592462 ERICH3Q5RHP9 1530 aa27.71■■■□□ 2.03
ITGA2B-209ENST00000592462 ABCA10Q8WWZ4 1543 aa27.7■■■□□ 2.02
ITGA2B-209ENST00000592462 HRCP23327 699 aa27.7■■■□□ 2.02
ITGA2B-209ENST00000592462 ERCC6Q03468 1493 aa27.69■■■□□ 2.02
ITGA2B-209ENST00000592462 P3H3Q8IVL6 736 aa27.68■■■□□ 2.02
ITGA2B-209ENST00000592462 MRC2Q9UBG0 1479 aa27.61■■■□□ 2.01
ITGA2B-209ENST00000592462 AQRO60306 1485 aaKnown RBP eCLIP27.59■■■□□ 2.012e-6■■■□□ 18.7
ITGA2B-209ENST00000592462 VPS8Q8N3P4 1428 aa27.56■■■□□ 2
ITGA2B-209ENST00000592462 GAPVD1Q14C86 1478 aa27.56■■■□□ 2
ITGA2B-209ENST00000592462 ARAP1Q96P48 1450 aa27.55■■■□□ 2
ITGA2B-209ENST00000592462 APLP2Q06481 763 aa27.54■■■□□ 2
ITGA2B-209ENST00000592462 WDR97A6NE52 1622 aa27.52■■■□□ 2
ITGA2B-209ENST00000592462 ZNF608Q9ULD9 1512 aaPredicted RBP27.49■■□□□ 1.99
ITGA2B-209ENST00000592462 TARBP1Q13395 1621 aaKnown RBP27.48■■□□□ 1.99
ITGA2B-209ENST00000592462 ATP1B4Q9UN42 357 aaPredicted RBP27.48■■□□□ 1.99
ITGA2B-209ENST00000592462 ARHGAP35Q9NRY4 1499 aa27.48■■□□□ 1.99
ITGA2B-209ENST00000592462 ABCA5Q8WWZ7 1642 aa27.45■■□□□ 1.98
ITGA2B-209ENST00000592462 KANK4Q5T7N3 995 aaPredicted RBP27.39■■□□□ 1.98
ITGA2B-209ENST00000592462 WDR62O43379 1518 aa27.36■■□□□ 1.97
ITGA2B-209ENST00000592462 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.34■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 116.4 ms