RNA–Protein interactions for RNA: ENST00000592197.5

RANBP3-226, Transcript of RAN binding protein 3, humanhuman

TSL 3

Gene RANBP3, Length 530 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP3-226ENST00000592197 NISCHQ9Y2I1 1504 aa33.95■■■■□ 3.03
RANBP3-226ENST00000592197 CCDC180Q9P1Z9 1646 aa30.12■■■□□ 2.41
RANBP3-226ENST00000592197 ABCC9O60706 1549 aa29.26■■■□□ 2.27
RANBP3-226ENST00000592197 ZCCHC6Q5VYS8 1495 aaKnown RBP28.32■■■□□ 2.12
RANBP3-226ENST00000592197 NACADO15069 1562 aa28.25■■■□□ 2.11
RANBP3-226ENST00000592197 RB1CC1Q8TDY2 1594 aa28.22■■■□□ 2.11
RANBP3-226ENST00000592197 MYO15BQ96JP2 1530 aa28.18■■■□□ 2.1
RANBP3-226ENST00000592197 DCAF8L2P0C7V8 631 aa28.17■■■□□ 2.1
RANBP3-226ENST00000592197 DCAF1Q9Y4B6 1507 aa28.12■■■□□ 2.09
RANBP3-226ENST00000592197 UNC13AQ9UPW8 1703 aa27.71■■■□□ 2.03
RANBP3-226ENST00000592197 BICRAQ9NZM4 1560 aa27.47■■□□□ 1.99
RANBP3-226ENST00000592197 SCRIBQ14160 1630 aa27.45■■□□□ 1.99
RANBP3-226ENST00000592197 PABPN1Q86U42 306 aaKnown RBP eCLIP27.37■■□□□ 1.974e-7■■□□□ 14.5
RANBP3-226ENST00000592197 SHROOM4Q9ULL8 1493 aa27.1■■□□□ 1.93
RANBP3-226ENST00000592197 DNAJC5BQ9UF47 199 aa26.81■■□□□ 1.88
RANBP3-226ENST00000592197 EIF4G1Q04637 1599 aaKnown RBP26.67■■□□□ 1.86
RANBP3-226ENST00000592197 CC2D2AQ9P2K1 1620 aa26.52■■□□□ 1.84
RANBP3-226ENST00000592197 CECR2Q9BXF3 1484 aa26.45■■□□□ 1.82
RANBP3-226ENST00000592197 SMARCA4P51532 1647 aa26.31■■□□□ 1.8
RANBP3-226ENST00000592197 BAZ1AQ9NRL2 1556 aaPredicted RBP26.27■■□□□ 1.8
RANBP3-226ENST00000592197 MROH2BQ7Z745 1585 aa26.18■■□□□ 1.78
RANBP3-226ENST00000592197 ATAD2BQ9ULI0 1458 aa26.12■■□□□ 1.77
RANBP3-226ENST00000592197 NCAPD3P42695 1498 aa26.1■■□□□ 1.77
RANBP3-226ENST00000592197 PEG3Q9GZU2 1588 aa26.09■■□□□ 1.77
RANBP3-226ENST00000592197 SMARCA2P51531 1590 aa26.06■■□□□ 1.76
RANBP3-226ENST00000592197 HMGXB3Q12766 1538 aa25.96■■□□□ 1.75
RANBP3-226ENST00000592197 RSF1Q96T23 1441 aaPredicted RBP25.94■■□□□ 1.74
RANBP3-226ENST00000592197 WIZO95785 1651 aa25.92■■□□□ 1.74
RANBP3-226ENST00000592197 BAZ1BQ9UIG0 1483 aaKnown RBP25.87■■□□□ 1.73
RANBP3-226ENST00000592197 TOP2AP11388 1531 aaKnown RBP25.61■■□□□ 1.69
RANBP3-226ENST00000592197 NESP48681 1621 aa25.41■■□□□ 1.66
RANBP3-226ENST00000592197 LAMC3Q9Y6N6 1575 aa25.35■■□□□ 1.65
RANBP3-226ENST00000592197 CCDC88BA6NC98 1476 aa25.33■■□□□ 1.65
RANBP3-226ENST00000592197 CADPSQ9ULU8 1353 aa25.31■■□□□ 1.64
RANBP3-226ENST00000592197 SUPT5HO00267 1087 aaKnown RBP25.3■■□□□ 1.64
RANBP3-226ENST00000592197 CFTRP13569 1480 aa25.22■■□□□ 1.63
RANBP3-226ENST00000592197 ERCC6Q03468 1493 aa25.15■■□□□ 1.62
RANBP3-226ENST00000592197 KIF21AQ7Z4S6 1674 aa25.13■■□□□ 1.61
RANBP3-226ENST00000592197 PDS5BQ9NTI5 1447 aa25.12■■□□□ 1.61
RANBP3-226ENST00000592197 PRDM2Q13029 1718 aa25.07■■□□□ 1.6
RANBP3-226ENST00000592197 FANCD2Q9BXW9 1451 aa25.01■■□□□ 1.59
RANBP3-226ENST00000592197 THOC2Q8NI27 1593 aaKnown RBP25.01■■□□□ 1.59
RANBP3-226ENST00000592197 CEP164Q9UPV0 1460 aa24.94■■□□□ 1.58
RANBP3-226ENST00000592197 MRC2Q9UBG0 1479 aa24.89■■□□□ 1.57
RANBP3-226ENST00000592197 CUX2O14529 1486 aa24.88■■□□□ 1.57
RANBP3-226ENST00000592197 WDR62O43379 1518 aa24.84■■□□□ 1.57
RANBP3-226ENST00000592197 URB2Q14146 1524 aaKnown RBP24.79■■□□□ 1.56
RANBP3-226ENST00000592197 TOPBP1Q92547 1522 aa24.66■■□□□ 1.54
RANBP3-226ENST00000592197 DNMBPQ6XZF7 1577 aa24.63■■□□□ 1.53
RANBP3-226ENST00000592197 ABCC8Q09428 1581 aa24.62■■□□□ 1.53
RANBP3-226ENST00000592197 CUX1P39880 1505 aa24.55■■□□□ 1.52
RANBP3-226ENST00000592197 POLA1P09884 1462 aaPredicted RBP24.45■■□□□ 1.5
RANBP3-226ENST00000592197 IFT140Q96RY7 1462 aa24.42■■□□□ 1.5
RANBP3-226ENST00000592197 TARBP1Q13395 1621 aaKnown RBP24.41■■□□□ 1.5
RANBP3-226ENST00000592197 FGD5Q6ZNL6 1462 aa24.4■■□□□ 1.5
RANBP3-226ENST00000592197 WRNQ14191 1432 aaPredicted RBP eCLIP24.4■■□□□ 1.5
RANBP3-226ENST00000592197 SYNJ1O43426 1573 aa24.38■■□□□ 1.49
RANBP3-226ENST00000592197 BIVM-ERCC5R4GMW8 1640 aa24.38■■□□□ 1.49
RANBP3-226ENST00000592197 TOP2BQ02880 1626 aa24.37■■□□□ 1.49
RANBP3-226ENST00000592197 ZNF608Q9ULD9 1512 aaPredicted RBP24.35■■□□□ 1.49
RANBP3-226ENST00000592197 RAD54L2Q9Y4B4 1467 aa24.34■■□□□ 1.49
RANBP3-226ENST00000592197 SOGA1O94964 1423 aa24.33■■□□□ 1.49
RANBP3-226ENST00000592197 WDR97A6NE52 1622 aa24.26■■□□□ 1.47
RANBP3-226ENST00000592197 EIF4G3O43432 1585 aaKnown RBP24.25■■□□□ 1.47
RANBP3-226ENST00000592197 AQRO60306 1485 aaKnown RBP eCLIP24.21■■□□□ 1.471e-9■■■■■ 38.5
RANBP3-226ENST00000592197 ABCA10Q8WWZ4 1543 aa24.19■■□□□ 1.46
RANBP3-226ENST00000592197 TDRD9Q8NDG6 1382 aaKnown RBP24.18■■□□□ 1.46
RANBP3-226ENST00000592197 ABCA5Q8WWZ7 1642 aa24.1■■□□□ 1.45
RANBP3-226ENST00000592197 GAPVD1Q14C86 1478 aa24.05■■□□□ 1.44
RANBP3-226ENST00000592197 PBRM1Q86U86 1689 aa24.03■■□□□ 1.44
RANBP3-226ENST00000592197 GRIN2BQ13224 1484 aa24.01■■□□□ 1.43
RANBP3-226ENST00000592197 SNAPC4Q5SXM2 1469 aa23.97■■□□□ 1.43
RANBP3-226ENST00000592197 DNAJC5Q9H3Z4 198 aa23.96■■□□□ 1.43
RANBP3-226ENST00000592197 MAGI1Q96QZ7 1491 aaPredicted RBP23.94■■□□□ 1.42
RANBP3-226ENST00000592197 CHD1O14646 1710 aa23.93■■□□□ 1.42
RANBP3-226ENST00000592197 ERICH3Q5RHP9 1530 aa23.89■■□□□ 1.42
RANBP3-226ENST00000592197 TRIM41Q8WV44 630 aa23.89■■□□□ 1.41
RANBP3-226ENST00000592197 SYNJ2O15056 1496 aa23.86■■□□□ 1.41
RANBP3-226ENST00000592197 KIF27Q86VH2 1401 aa23.85■■□□□ 1.41
RANBP3-226ENST00000592197 OSCARQ8IYS5 282 aa23.85■■□□□ 1.41
RANBP3-226ENST00000592197 ADAMTS12P58397 1594 aa23.84■■□□□ 1.41
RANBP3-226ENST00000592197 IGF1RP08069 1367 aa23.8■■□□□ 1.4
RANBP3-226ENST00000592197 FBLN2P98095 1184 aa23.79■■□□□ 1.4
RANBP3-226ENST00000592197 RUSC2Q8N2Y8 1516 aa23.79■■□□□ 1.4
RANBP3-226ENST00000592197 CHIC1Q5VXU3 224 aa23.78■■□□□ 1.4
RANBP3-226ENST00000592197 FHAD1B1AJZ9 1412 aa23.77■■□□□ 1.4
RANBP3-226ENST00000592197 CHMP7Q8WUX9 453 aaPredicted RBP23.77■■□□□ 1.4
RANBP3-226ENST00000592197 GRIN2AQ12879 1464 aa23.73■■□□□ 1.39
RANBP3-226ENST00000592197 CUL7Q14999 1698 aa23.7■■□□□ 1.38
RANBP3-226ENST00000592197 CLASP1Q7Z460 1538 aa23.68■■□□□ 1.38
RANBP3-226ENST00000592197 NUP160Q12769 1436 aa23.64■■□□□ 1.37
RANBP3-226ENST00000592197 CEP170Q5SW79 1584 aa23.64■■□□□ 1.37
RANBP3-226ENST00000592197 CARMIL1Q5VZK9 1371 aa23.62■■□□□ 1.37
RANBP3-226ENST00000592197 RIMBP3CA6NJZ7 1639 aa23.51■■□□□ 1.35
RANBP3-226ENST00000592197 RIMBP3BA6NNM3 1639 aa23.51■■□□□ 1.35
RANBP3-226ENST00000592197 RIMBP3Q9UFD9 1639 aa23.51■■□□□ 1.35
RANBP3-226ENST00000592197 PRXQ9BXM0 1461 aa23.51■■□□□ 1.35
RANBP3-226ENST00000592197 ARHGEF11O15085 1522 aa23.51■■□□□ 1.35
RANBP3-226ENST00000592197 EEA1Q15075 1411 aa23.5■■□□□ 1.35
RANBP3-226ENST00000592197 RAPGEF2Q9Y4G8 1499 aa23.5■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms