RNA–Protein interactions for RNA: ENST00000591974.5

LINC01539-205, Transcript of long intergenic non-protein coding RNA 1539, humanhuman

TSL 2 BASIC

Gene LINC01539, Length 1,884 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01539-205ENST00000591974 NISCHQ9Y2I1 1504 aa24.1■■□□□ 1.45
LINC01539-205ENST00000591974 CCDC180Q9P1Z9 1646 aa21.12■□□□□ 0.97
LINC01539-205ENST00000591974 ZCCHC6Q5VYS8 1495 aaKnown RBP20.25■□□□□ 0.83
LINC01539-205ENST00000591974 DCAF1Q9Y4B6 1507 aa19.98■□□□□ 0.79
LINC01539-205ENST00000591974 ABCC9O60706 1549 aa19.88■□□□□ 0.77
LINC01539-205ENST00000591974 DCAF8L2P0C7V8 631 aa19.78■□□□□ 0.76
LINC01539-205ENST00000591974 MYO15BQ96JP2 1530 aa19.77■□□□□ 0.76
LINC01539-205ENST00000591974 NACADO15069 1562 aa19.65■□□□□ 0.74
LINC01539-205ENST00000591974 SHROOM4Q9ULL8 1493 aa19.51■□□□□ 0.71
LINC01539-205ENST00000591974 RB1CC1Q8TDY2 1594 aa19.48■□□□□ 0.71
LINC01539-205ENST00000591974 SCRIBQ14160 1630 aa19.32■□□□□ 0.68
LINC01539-205ENST00000591974 UNC13AQ9UPW8 1703 aa19.13■□□□□ 0.65
LINC01539-205ENST00000591974 BICRAQ9NZM4 1560 aa18.88■□□□□ 0.61
LINC01539-205ENST00000591974 SUPT5HO00267 1087 aaKnown RBP18.74■□□□□ 0.59
LINC01539-205ENST00000591974 PABPN1Q86U42 306 aaKnown RBP eCLIP18.68■□□□□ 0.58
LINC01539-205ENST00000591974 CECR2Q9BXF3 1484 aa18.67■□□□□ 0.58
LINC01539-205ENST00000591974 RSF1Q96T23 1441 aaPredicted RBP18.64■□□□□ 0.57
LINC01539-205ENST00000591974 BAZ1AQ9NRL2 1556 aaPredicted RBP18.63■□□□□ 0.57
LINC01539-205ENST00000591974 MROH2BQ7Z745 1585 aa18.59■□□□□ 0.57
LINC01539-205ENST00000591974 SMARCA4P51532 1647 aa18.56■□□□□ 0.56
LINC01539-205ENST00000591974 WIZO95785 1651 aa18.46■□□□□ 0.55
LINC01539-205ENST00000591974 AEBP2Q6ZN18 517 aaPredicted RBP18.4■□□□□ 0.54
LINC01539-205ENST00000591974 PEG3Q9GZU2 1588 aa18.36■□□□□ 0.53
LINC01539-205ENST00000591974 EIF4G1Q04637 1599 aaKnown RBP18.31■□□□□ 0.52
LINC01539-205ENST00000591974 TOP2AP11388 1531 aaKnown RBP18.29■□□□□ 0.52
LINC01539-205ENST00000591974 SMARCA2P51531 1590 aa18.26■□□□□ 0.51
LINC01539-205ENST00000591974 ATAD2BQ9ULI0 1458 aa18.23■□□□□ 0.51
LINC01539-205ENST00000591974 BAZ1BQ9UIG0 1483 aaKnown RBP18.13■□□□□ 0.49
LINC01539-205ENST00000591974 HMGXB3Q12766 1538 aa18.11■□□□□ 0.49
LINC01539-205ENST00000591974 CHIC1Q5VXU3 224 aa18.09■□□□□ 0.49
LINC01539-205ENST00000591974 NCAPD3P42695 1498 aa18.09■□□□□ 0.49
LINC01539-205ENST00000591974 CCDC88BA6NC98 1476 aa18.05■□□□□ 0.48
LINC01539-205ENST00000591974 CC2D2AQ9P2K1 1620 aa18.04■□□□□ 0.48
LINC01539-205ENST00000591974 PRDM2Q13029 1718 aa17.71■□□□□ 0.43
LINC01539-205ENST00000591974 CFTRP13569 1480 aa17.68■□□□□ 0.42
LINC01539-205ENST00000591974 TRIM41Q8WV44 630 aa17.66■□□□□ 0.42
LINC01539-205ENST00000591974 ABCC8Q09428 1581 aa17.65■□□□□ 0.42
LINC01539-205ENST00000591974 CADPSQ9ULU8 1353 aa17.6■□□□□ 0.41
LINC01539-205ENST00000591974 WRNQ14191 1432 aaPredicted RBP eCLIP17.57■□□□□ 0.4
LINC01539-205ENST00000591974 LAMC3Q9Y6N6 1575 aa17.53■□□□□ 0.4
LINC01539-205ENST00000591974 DNAJC5BQ9UF47 199 aa17.51■□□□□ 0.39
LINC01539-205ENST00000591974 SYNJ1O43426 1573 aa17.51■□□□□ 0.39
LINC01539-205ENST00000591974 BIVM-ERCC5R4GMW8 1640 aa17.47■□□□□ 0.39
LINC01539-205ENST00000591974 TOP2BQ02880 1626 aa17.47■□□□□ 0.39
LINC01539-205ENST00000591974 NESP48681 1621 aa17.44■□□□□ 0.38
LINC01539-205ENST00000591974 FANCD2Q9BXW9 1451 aa17.42■□□□□ 0.38
LINC01539-205ENST00000591974 CUX1P39880 1505 aa17.4■□□□□ 0.38
LINC01539-205ENST00000591974 PDS5BQ9NTI5 1447 aa17.35■□□□□ 0.37
LINC01539-205ENST00000591974 CEP164Q9UPV0 1460 aa17.33■□□□□ 0.36
LINC01539-205ENST00000591974 EEA1Q15075 1411 aa17.33■□□□□ 0.36
LINC01539-205ENST00000591974 KIF21AQ7Z4S6 1674 aa17.31■□□□□ 0.36
LINC01539-205ENST00000591974 DNMBPQ6XZF7 1577 aa17.29■□□□□ 0.36
LINC01539-205ENST00000591974 SOGA1O94964 1423 aa17.29■□□□□ 0.36
LINC01539-205ENST00000591974 FAM9AQ8IZU1 332 aaPredicted RBP17.28■□□□□ 0.36
LINC01539-205ENST00000591974 TOPBP1Q92547 1522 aa17.24■□□□□ 0.35
LINC01539-205ENST00000591974 RUSC2Q8N2Y8 1516 aa17.21■□□□□ 0.35
LINC01539-205ENST00000591974 LOC105371045A0A1W2PR82 267 aa17.21■□□□□ 0.35
LINC01539-205ENST00000591974 FGD5Q6ZNL6 1462 aa17.21■□□□□ 0.35
LINC01539-205ENST00000591974 URB2Q14146 1524 aaKnown RBP17.2■□□□□ 0.34
LINC01539-205ENST00000591974 CSRNP3Q8WYN3 585 aa17.16■□□□□ 0.34
LINC01539-205ENST00000591974 POLA1P09884 1462 aaPredicted RBP17.14■□□□□ 0.33
LINC01539-205ENST00000591974 MRC2Q9UBG0 1479 aa17.13■□□□□ 0.33
LINC01539-205ENST00000591974 KIF27Q86VH2 1401 aa17.13■□□□□ 0.33
LINC01539-205ENST00000591974 KIF21BO75037 1637 aa17.12■□□□□ 0.33
LINC01539-205ENST00000591974 WDR97A6NE52 1622 aa17.09■□□□□ 0.33
LINC01539-205ENST00000591974 ABCA10Q8WWZ4 1543 aa17.08■□□□□ 0.33
LINC01539-205ENST00000591974 CUX2O14529 1486 aa17.08■□□□□ 0.32
LINC01539-205ENST00000591974 ERCC6Q03468 1493 aa17.08■□□□□ 0.32
LINC01539-205ENST00000591974 WDR62O43379 1518 aa17.07■□□□□ 0.32
LINC01539-205ENST00000591974 GOLGA3Q08378 1498 aa17.06■□□□□ 0.32
LINC01539-205ENST00000591974 RAD54L2Q9Y4B4 1467 aa17.05■□□□□ 0.32
LINC01539-205ENST00000591974 THOC2Q8NI27 1593 aaKnown RBP17.04■□□□□ 0.32
LINC01539-205ENST00000591974 ERICH3Q5RHP9 1530 aa17.01■□□□□ 0.31
LINC01539-205ENST00000591974 PRXQ9BXM0 1461 aa17.01■□□□□ 0.31
LINC01539-205ENST00000591974 TARBP1Q13395 1621 aaKnown RBP17■□□□□ 0.31
LINC01539-205ENST00000591974 EHMT2Q96KQ7 1210 aa16.99■□□□□ 0.31
LINC01539-205ENST00000591974 TNIKQ9UKE5 1360 aa16.98■□□□□ 0.31
LINC01539-205ENST00000591974 ABCA5Q8WWZ7 1642 aa16.97■□□□□ 0.31
LINC01539-205ENST00000591974 RAPGEF2Q9Y4G8 1499 aa16.96■□□□□ 0.31
LINC01539-205ENST00000591974 IGF1RP08069 1367 aa16.95■□□□□ 0.3
LINC01539-205ENST00000591974 IFT140Q96RY7 1462 aa16.92■□□□□ 0.3
LINC01539-205ENST00000591974 CUL7Q14999 1698 aa16.92■□□□□ 0.3
LINC01539-205ENST00000591974 UBTFP17480 764 aaKnown RBP16.91■□□□□ 0.3
LINC01539-205ENST00000591974 GAPVD1Q14C86 1478 aa16.9■□□□□ 0.3
LINC01539-205ENST00000591974 CEP162Q5TB80 1403 aa16.88■□□□□ 0.29
LINC01539-205ENST00000591974 PBRM1Q86U86 1689 aa16.87■□□□□ 0.29
LINC01539-205ENST00000591974 CARMIL1Q5VZK9 1371 aa16.87■□□□□ 0.29
LINC01539-205ENST00000591974 TDRD9Q8NDG6 1382 aaKnown RBP16.87■□□□□ 0.29
LINC01539-205ENST00000591974 EIF4G3O43432 1585 aaKnown RBP16.79■□□□□ 0.28
LINC01539-205ENST00000591974 ZNF608Q9ULD9 1512 aaPredicted RBP16.78■□□□□ 0.28
LINC01539-205ENST00000591974 AQRO60306 1485 aaKnown RBP eCLIP16.78■□□□□ 0.28
LINC01539-205ENST00000591974 GRIN2BQ13224 1484 aa16.78■□□□□ 0.28
LINC01539-205ENST00000591974 CLIP1P30622 1438 aa16.76■□□□□ 0.27
LINC01539-205ENST00000591974 ADAMTS12P58397 1594 aa16.75■□□□□ 0.27
LINC01539-205ENST00000591974 CTTNBP2Q8WZ74 1663 aa16.74■□□□□ 0.27
LINC01539-205ENST00000591974 FHAD1B1AJZ9 1412 aa16.72■□□□□ 0.27
LINC01539-205ENST00000591974 MAGI1Q96QZ7 1491 aaPredicted RBP16.66■□□□□ 0.26
LINC01539-205ENST00000591974 SNAPC4Q5SXM2 1469 aa16.66■□□□□ 0.26
LINC01539-205ENST00000591974 VPS8Q8N3P4 1428 aa16.62■□□□□ 0.25
LINC01539-205ENST00000591974 ARHGAP35Q9NRY4 1499 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms