RNA–Protein interactions for RNA: ENST00000591789.1

RTN2-211, Transcript of reticulon 2, humanhuman

TSL 3

Gene RTN2, Length 682 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN2-211ENST00000591789 NISCHQ9Y2I1 1504 aa29.25■■■□□ 2.27
RTN2-211ENST00000591789 ABCC9O60706 1549 aa26.23■■□□□ 1.79
RTN2-211ENST00000591789 CCDC180Q9P1Z9 1646 aa25.7■■□□□ 1.7
RTN2-211ENST00000591789 DNAJC5BQ9UF47 199 aa25.22■■□□□ 1.63
RTN2-211ENST00000591789 RB1CC1Q8TDY2 1594 aa24.6■■□□□ 1.53
RTN2-211ENST00000591789 ZCCHC6Q5VYS8 1495 aaKnown RBP24.52■■□□□ 1.52
RTN2-211ENST00000591789 PABPN1Q86U42 306 aaKnown RBP eCLIP24.3■■□□□ 1.48
RTN2-211ENST00000591789 DCAF1Q9Y4B6 1507 aa24.28■■□□□ 1.48
RTN2-211ENST00000591789 NACADO15069 1562 aa24.22■■□□□ 1.47
RTN2-211ENST00000591789 MYO15BQ96JP2 1530 aa24.15■■□□□ 1.46
RTN2-211ENST00000591789 DCAF8L2P0C7V8 631 aa24.1■■□□□ 1.45
RTN2-211ENST00000591789 UNC13AQ9UPW8 1703 aa23.97■■□□□ 1.43
RTN2-211ENST00000591789 BICRAQ9NZM4 1560 aa23.86■■□□□ 1.41
RTN2-211ENST00000591789 DNAJC5Q9H3Z4 198 aa23.74■■□□□ 1.39
RTN2-211ENST00000591789 CECR2Q9BXF3 1484 aa23.69■■□□□ 1.38
RTN2-211ENST00000591789 CC2D2AQ9P2K1 1620 aa23.62■■□□□ 1.37
RTN2-211ENST00000591789 SHROOM4Q9ULL8 1493 aa23.49■■□□□ 1.35
RTN2-211ENST00000591789 SCRIBQ14160 1630 aa23.46■■□□□ 1.35
RTN2-211ENST00000591789 EIF4G1Q04637 1599 aaKnown RBP23.38■■□□□ 1.33
RTN2-211ENST00000591789 CUX2O14529 1486 aa22.89■■□□□ 1.25
RTN2-211ENST00000591789 ERCC6Q03468 1493 aa22.74■■□□□ 1.23
RTN2-211ENST00000591789 BAZ1AQ9NRL2 1556 aaPredicted RBP22.63■■□□□ 1.21
RTN2-211ENST00000591789 RSF1Q96T23 1441 aaPredicted RBP22.55■■□□□ 1.2
RTN2-211ENST00000591789 MROH2BQ7Z745 1585 aa22.54■■□□□ 1.2
RTN2-211ENST00000591789 SMARCA4P51532 1647 aa22.53■■□□□ 1.2
RTN2-211ENST00000591789 TRIM41Q8WV44 630 aa22.48■■□□□ 1.19
RTN2-211ENST00000591789 SUPT5HO00267 1087 aaKnown RBP22.43■■□□□ 1.18
RTN2-211ENST00000591789 NCAPD3P42695 1498 aa22.36■■□□□ 1.17
RTN2-211ENST00000591789 PEG3Q9GZU2 1588 aa22.34■■□□□ 1.17
RTN2-211ENST00000591789 WIZO95785 1651 aa22.3■■□□□ 1.16
RTN2-211ENST00000591789 NESP48681 1621 aa22.28■■□□□ 1.16
RTN2-211ENST00000591789 SMARCA2P51531 1590 aa22.27■■□□□ 1.16
RTN2-211ENST00000591789 ATAD2BQ9ULI0 1458 aa22.27■■□□□ 1.16
RTN2-211ENST00000591789 THOC2Q8NI27 1593 aaKnown RBP22.18■■□□□ 1.14
RTN2-211ENST00000591789 TOP2AP11388 1531 aaKnown RBP22.15■■□□□ 1.14
RTN2-211ENST00000591789 HMGXB3Q12766 1538 aa22.13■■□□□ 1.13
RTN2-211ENST00000591789 BAZ1BQ9UIG0 1483 aaKnown RBP22.11■■□□□ 1.13
RTN2-211ENST00000591789 LAMC3Q9Y6N6 1575 aa22■■□□□ 1.11
RTN2-211ENST00000591789 KIF21AQ7Z4S6 1674 aa21.95■■□□□ 1.1
RTN2-211ENST00000591789 PDS5BQ9NTI5 1447 aa21.93■■□□□ 1.1
RTN2-211ENST00000591789 CCDC88BA6NC98 1476 aa21.88■■□□□ 1.09
RTN2-211ENST00000591789 MRC2Q9UBG0 1479 aa21.77■■□□□ 1.08
RTN2-211ENST00000591789 OSCARQ8IYS5 282 aa21.75■■□□□ 1.07
RTN2-211ENST00000591789 WDR62O43379 1518 aa21.72■■□□□ 1.07
RTN2-211ENST00000591789 CADPSQ9ULU8 1353 aa21.67■■□□□ 1.06
RTN2-211ENST00000591789 CFTRP13569 1480 aa21.57■■□□□ 1.04
RTN2-211ENST00000591789 CEP164Q9UPV0 1460 aa21.55■■□□□ 1.04
RTN2-211ENST00000591789 RIMBP3CA6NJZ7 1639 aa21.52■■□□□ 1.04
RTN2-211ENST00000591789 RIMBP3BA6NNM3 1639 aa21.52■■□□□ 1.04
RTN2-211ENST00000591789 RIMBP3Q9UFD9 1639 aa21.52■■□□□ 1.04
RTN2-211ENST00000591789 FANCD2Q9BXW9 1451 aa21.45■■□□□ 1.02
RTN2-211ENST00000591789 CHIC1Q5VXU3 224 aa21.43■■□□□ 1.02
RTN2-211ENST00000591789 ARHGEF11O15085 1522 aa21.39■■□□□ 1.01
RTN2-211ENST00000591789 PRDM2Q13029 1718 aa21.38■■□□□ 1.01
RTN2-211ENST00000591789 TRHP20396 242 aaPredicted RBP21.38■■□□□ 1.01
RTN2-211ENST00000591789 AEBP2Q6ZN18 517 aaPredicted RBP21.34■■□□□ 1.01
RTN2-211ENST00000591789 CYB5RLQ6IPT4 315 aa21.32■■□□□ 1
RTN2-211ENST00000591789 URB2Q14146 1524 aaKnown RBP21.29■■□□□ 1
RTN2-211ENST00000591789 ABCC8Q09428 1581 aa21.24■□□□□ 0.99
RTN2-211ENST00000591789 WRNQ14191 1432 aaPredicted RBP eCLIP21.23■□□□□ 0.99
RTN2-211ENST00000591789 ZNF608Q9ULD9 1512 aaPredicted RBP21.16■□□□□ 0.98
RTN2-211ENST00000591789 IFT140Q96RY7 1462 aa21.13■□□□□ 0.97
RTN2-211ENST00000591789 SYNJ1O43426 1573 aa21.11■□□□□ 0.97
RTN2-211ENST00000591789 TOP2BQ02880 1626 aa21.11■□□□□ 0.97
RTN2-211ENST00000591789 CUX1P39880 1505 aa21.1■□□□□ 0.97
RTN2-211ENST00000591789 ARAP1Q96P48 1450 aa21.1■□□□□ 0.97
RTN2-211ENST00000591789 BIVM-ERCC5R4GMW8 1640 aa21.09■□□□□ 0.97
RTN2-211ENST00000591789 DNMBPQ6XZF7 1577 aa21.06■□□□□ 0.96
RTN2-211ENST00000591789 TOPBP1Q92547 1522 aa21.02■□□□□ 0.96
RTN2-211ENST00000591789 EIF4G3O43432 1585 aaKnown RBP21.02■□□□□ 0.95
RTN2-211ENST00000591789 FBLN2P98095 1184 aa21■□□□□ 0.95
RTN2-211ENST00000591789 CHD1O14646 1710 aa20.99■□□□□ 0.95
RTN2-211ENST00000591789 FGD5Q6ZNL6 1462 aa20.93■□□□□ 0.94
RTN2-211ENST00000591789 AQRO60306 1485 aaKnown RBP eCLIP20.89■□□□□ 0.94
RTN2-211ENST00000591789 POLA1P09884 1462 aaPredicted RBP20.88■□□□□ 0.93
RTN2-211ENST00000591789 EEA1Q15075 1411 aa20.84■□□□□ 0.93
RTN2-211ENST00000591789 SOGA1O94964 1423 aa20.82■□□□□ 0.92
RTN2-211ENST00000591789 ABCA10Q8WWZ4 1543 aa20.78■□□□□ 0.92
RTN2-211ENST00000591789 TARBP1Q13395 1621 aaKnown RBP20.78■□□□□ 0.92
RTN2-211ENST00000591789 RAD54L2Q9Y4B4 1467 aa20.76■□□□□ 0.91
RTN2-211ENST00000591789 KIF27Q86VH2 1401 aa20.75■□□□□ 0.91
RTN2-211ENST00000591789 CLASP1Q7Z460 1538 aa20.72■□□□□ 0.91
RTN2-211ENST00000591789 RUSC2Q8N2Y8 1516 aa20.72■□□□□ 0.91
RTN2-211ENST00000591789 WDR97A6NE52 1622 aa20.71■□□□□ 0.91
RTN2-211ENST00000591789 FAM9AQ8IZU1 332 aaPredicted RBP20.69■□□□□ 0.9
RTN2-211ENST00000591789 CHMP7Q8WUX9 453 aaPredicted RBP20.68■□□□□ 0.9
RTN2-211ENST00000591789 CSRNP3Q8WYN3 585 aa20.67■□□□□ 0.9
RTN2-211ENST00000591789 TDRD9Q8NDG6 1382 aaKnown RBP20.66■□□□□ 0.9
RTN2-211ENST00000591789 SNAPC4Q5SXM2 1469 aa20.66■□□□□ 0.9
RTN2-211ENST00000591789 ABCA5Q8WWZ7 1642 aa20.61■□□□□ 0.89
RTN2-211ENST00000591789 GAPVD1Q14C86 1478 aa20.61■□□□□ 0.89
RTN2-211ENST00000591789 IGF1RP08069 1367 aa20.59■□□□□ 0.89
RTN2-211ENST00000591789 MAGI1Q96QZ7 1491 aaPredicted RBP20.56■□□□□ 0.88
RTN2-211ENST00000591789 ERICH3Q5RHP9 1530 aa20.55■□□□□ 0.88
RTN2-211ENST00000591789 LOC105371045A0A1W2PR82 267 aa20.54■□□□□ 0.88
RTN2-211ENST00000591789 PRXQ9BXM0 1461 aa20.53■□□□□ 0.88
RTN2-211ENST00000591789 KIF21BO75037 1637 aa20.53■□□□□ 0.88
RTN2-211ENST00000591789 SYNJ2O15056 1496 aa20.51■□□□□ 0.87
RTN2-211ENST00000591789 GRIN2BQ13224 1484 aa20.5■□□□□ 0.87
RTN2-211ENST00000591789 CARMIL1Q5VZK9 1371 aa20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms