RNA–Protein interactions for RNA: ENST00000591740.5

GRN-218, Transcript of granulin precursor, humanhuman

TSL 4

Gene GRN, Length 585 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRN-218ENST00000591740 NISCHQ9Y2I1 1504 aa36.48■■■■□ 3.43
GRN-218ENST00000591740 CCDC180Q9P1Z9 1646 aa32.27■■■□□ 2.76
GRN-218ENST00000591740 ABCC9O60706 1549 aa31.63■■■□□ 2.65
GRN-218ENST00000591740 DCAF8L2P0C7V8 631 aa30.57■■■□□ 2.48
GRN-218ENST00000591740 ZCCHC6Q5VYS8 1495 aaKnown RBP30.38■■■□□ 2.45
GRN-218ENST00000591740 RB1CC1Q8TDY2 1594 aa30.37■■■□□ 2.45
GRN-218ENST00000591740 NACADO15069 1562 aa30.36■■■□□ 2.45
GRN-218ENST00000591740 MYO15BQ96JP2 1530 aa30.17■■■□□ 2.42
GRN-218ENST00000591740 DCAF1Q9Y4B6 1507 aa30.11■■■□□ 2.41
GRN-218ENST00000591740 UNC13AQ9UPW8 1703 aa29.75■■■□□ 2.35
GRN-218ENST00000591740 PABPN1Q86U42 306 aaKnown RBP eCLIP29.66■■■□□ 2.34
GRN-218ENST00000591740 SCRIBQ14160 1630 aa29.57■■■□□ 2.32
GRN-218ENST00000591740 BICRAQ9NZM4 1560 aa29.52■■■□□ 2.32
GRN-218ENST00000591740 DNAJC5BQ9UF47 199 aa29.07■■■□□ 2.24
GRN-218ENST00000591740 SHROOM4Q9ULL8 1493 aa29.05■■■□□ 2.24
GRN-218ENST00000591740 EIF4G1Q04637 1599 aaKnown RBP28.7■■■□□ 2.18
GRN-218ENST00000591740 CC2D2AQ9P2K1 1620 aa28.58■■■□□ 2.17
GRN-218ENST00000591740 CECR2Q9BXF3 1484 aa28.48■■■□□ 2.15
GRN-218ENST00000591740 SMARCA4P51532 1647 aa28.25■■■□□ 2.11
GRN-218ENST00000591740 BAZ1AQ9NRL2 1556 aaPredicted RBP28.21■■■□□ 2.11
GRN-218ENST00000591740 MROH2BQ7Z745 1585 aa28.16■■■□□ 2.1
GRN-218ENST00000591740 ATAD2BQ9ULI0 1458 aa28.11■■■□□ 2.09
GRN-218ENST00000591740 NCAPD3P42695 1498 aa28.06■■■□□ 2.08
GRN-218ENST00000591740 SMARCA2P51531 1590 aa28.01■■■□□ 2.07
GRN-218ENST00000591740 PEG3Q9GZU2 1588 aa27.94■■■□□ 2.06
GRN-218ENST00000591740 RSF1Q96T23 1441 aaPredicted RBP27.88■■■□□ 2.05
GRN-218ENST00000591740 HMGXB3Q12766 1538 aa27.87■■■□□ 2.05
GRN-218ENST00000591740 WIZO95785 1651 aa27.85■■■□□ 2.05
GRN-218ENST00000591740 BAZ1BQ9UIG0 1483 aaKnown RBP27.85■■■□□ 2.05
GRN-218ENST00000591740 TOP2AP11388 1531 aaKnown RBP27.49■■□□□ 1.99
GRN-218ENST00000591740 NESP48681 1621 aa27.43■■□□□ 1.98
GRN-218ENST00000591740 SUPT5HO00267 1087 aaKnown RBP27.33■■□□□ 1.97
GRN-218ENST00000591740 CADPSQ9ULU8 1353 aa27.27■■□□□ 1.96
GRN-218ENST00000591740 CCDC88BA6NC98 1476 aa27.25■■□□□ 1.95
GRN-218ENST00000591740 LAMC3Q9Y6N6 1575 aa27.25■■□□□ 1.95
GRN-218ENST00000591740 ERCC6Q03468 1493 aa27.19■■□□□ 1.94
GRN-218ENST00000591740 CFTRP13569 1480 aa27.11■■□□□ 1.93
GRN-218ENST00000591740 PDS5BQ9NTI5 1447 aa27.09■■□□□ 1.93
GRN-218ENST00000591740 KIF21AQ7Z4S6 1674 aa27.05■■□□□ 1.92
GRN-218ENST00000591740 FANCD2Q9BXW9 1451 aa26.94■■□□□ 1.9
GRN-218ENST00000591740 THOC2Q8NI27 1593 aaKnown RBP26.89■■□□□ 1.9
GRN-218ENST00000591740 CEP164Q9UPV0 1460 aa26.87■■□□□ 1.89
GRN-218ENST00000591740 PRDM2Q13029 1718 aa26.84■■□□□ 1.89
GRN-218ENST00000591740 CUX2O14529 1486 aa26.82■■□□□ 1.88
GRN-218ENST00000591740 MRC2Q9UBG0 1479 aa26.81■■□□□ 1.88
GRN-218ENST00000591740 WDR62O43379 1518 aa26.7■■□□□ 1.87
GRN-218ENST00000591740 URB2Q14146 1524 aaKnown RBP26.7■■□□□ 1.86
GRN-218ENST00000591740 TOPBP1Q92547 1522 aa26.53■■□□□ 1.84
GRN-218ENST00000591740 ABCC8Q09428 1581 aa26.46■■□□□ 1.83
GRN-218ENST00000591740 DNMBPQ6XZF7 1577 aa26.46■■□□□ 1.83
GRN-218ENST00000591740 CUX1P39880 1505 aa26.39■■□□□ 1.82
GRN-218ENST00000591740 POLA1P09884 1462 aaPredicted RBP26.31■■□□□ 1.8
GRN-218ENST00000591740 IFT140Q96RY7 1462 aa26.3■■□□□ 1.8
GRN-218ENST00000591740 ZNF608Q9ULD9 1512 aaPredicted RBP26.26■■□□□ 1.79
GRN-218ENST00000591740 FGD5Q6ZNL6 1462 aa26.26■■□□□ 1.79
GRN-218ENST00000591740 RAD54L2Q9Y4B4 1467 aa26.26■■□□□ 1.79
GRN-218ENST00000591740 SOGA1O94964 1423 aa26.23■■□□□ 1.79
GRN-218ENST00000591740 WRNQ14191 1432 aaPredicted RBP eCLIP26.23■■□□□ 1.79
GRN-218ENST00000591740 TARBP1Q13395 1621 aaKnown RBP26.23■■□□□ 1.79
GRN-218ENST00000591740 SYNJ1O43426 1573 aa26.19■■□□□ 1.78
GRN-218ENST00000591740 TOP2BQ02880 1626 aa26.14■■□□□ 1.78
GRN-218ENST00000591740 AQRO60306 1485 aaKnown RBP eCLIP26.14■■□□□ 1.789e-10■■■■■ 33.9
GRN-218ENST00000591740 BIVM-ERCC5R4GMW8 1640 aa26.13■■□□□ 1.77
GRN-218ENST00000591740 TDRD9Q8NDG6 1382 aaKnown RBP26.12■■□□□ 1.77
GRN-218ENST00000591740 DNAJC5Q9H3Z4 198 aa26.11■■□□□ 1.77
GRN-218ENST00000591740 EIF4G3O43432 1585 aaKnown RBP26.07■■□□□ 1.76
GRN-218ENST00000591740 WDR97A6NE52 1622 aa25.99■■□□□ 1.75
GRN-218ENST00000591740 ABCA10Q8WWZ4 1543 aa25.99■■□□□ 1.75
GRN-218ENST00000591740 GAPVD1Q14C86 1478 aa25.91■■□□□ 1.74
GRN-218ENST00000591740 GRIN2BQ13224 1484 aa25.86■■□□□ 1.73
GRN-218ENST00000591740 ABCA5Q8WWZ7 1642 aa25.86■■□□□ 1.73
GRN-218ENST00000591740 SNAPC4Q5SXM2 1469 aa25.84■■□□□ 1.73
GRN-218ENST00000591740 OSCARQ8IYS5 282 aa25.83■■□□□ 1.73
GRN-218ENST00000591740 FBLN2P98095 1184 aa25.82■■□□□ 1.72
GRN-218ENST00000591740 PBRM1Q86U86 1689 aa25.8■■□□□ 1.72
GRN-218ENST00000591740 TRIM41Q8WV44 630 aa25.76■■□□□ 1.71
GRN-218ENST00000591740 CHD1O14646 1710 aa25.75■■□□□ 1.71
GRN-218ENST00000591740 MAGI1Q96QZ7 1491 aaPredicted RBP25.75■■□□□ 1.71
GRN-218ENST00000591740 CHMP7Q8WUX9 453 aaPredicted RBP25.73■■□□□ 1.71
GRN-218ENST00000591740 SYNJ2O15056 1496 aa25.68■■□□□ 1.7
GRN-218ENST00000591740 KIF27Q86VH2 1401 aa25.66■■□□□ 1.7
GRN-218ENST00000591740 ERICH3Q5RHP9 1530 aa25.66■■□□□ 1.7
GRN-218ENST00000591740 IGF1RP08069 1367 aa25.63■■□□□ 1.69
GRN-218ENST00000591740 ADAMTS12P58397 1594 aa25.61■■□□□ 1.69
GRN-218ENST00000591740 RUSC2Q8N2Y8 1516 aa25.59■■□□□ 1.69
GRN-218ENST00000591740 FHAD1B1AJZ9 1412 aa25.59■■□□□ 1.69
GRN-218ENST00000591740 CHIC1Q5VXU3 224 aa25.57■■□□□ 1.68
GRN-218ENST00000591740 GRIN2AQ12879 1464 aa25.53■■□□□ 1.68
GRN-218ENST00000591740 CLASP1Q7Z460 1538 aa25.46■■□□□ 1.67
GRN-218ENST00000591740 CARMIL1Q5VZK9 1371 aa25.44■■□□□ 1.66
GRN-218ENST00000591740 CEP170Q5SW79 1584 aa25.43■■□□□ 1.66
GRN-218ENST00000591740 NUP160Q12769 1436 aa25.42■■□□□ 1.66
GRN-218ENST00000591740 CUL7Q14999 1698 aa25.42■■□□□ 1.66
GRN-218ENST00000591740 RIMBP3CA6NJZ7 1639 aa25.37■■□□□ 1.65
GRN-218ENST00000591740 RIMBP3BA6NNM3 1639 aa25.37■■□□□ 1.65
GRN-218ENST00000591740 RIMBP3Q9UFD9 1639 aa25.37■■□□□ 1.65
GRN-218ENST00000591740 ARHGEF11O15085 1522 aa25.37■■□□□ 1.65
GRN-218ENST00000591740 FAM9AQ8IZU1 332 aaPredicted RBP25.3■■□□□ 1.64
GRN-218ENST00000591740 CSRNP3Q8WYN3 585 aa25.28■■□□□ 1.64
GRN-218ENST00000591740 RAPGEF2Q9Y4G8 1499 aa25.28■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms