RNA–Protein interactions for RNA: ENST00000591603.1

RDH13-217, Transcript of retinol dehydrogenase 13, humanhuman

TSL 5

Gene RDH13, Length 404 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH13-217ENST00000591603 NISCHQ9Y2I1 1504 aa47.04■■■■■ 5.12
RDH13-217ENST00000591603 CCDC180Q9P1Z9 1646 aa41.85■■■■■ 4.29
RDH13-217ENST00000591603 ABCC9O60706 1549 aa41.39■■■■■ 4.22
RDH13-217ENST00000591603 DCAF8L2P0C7V8 631 aa39.69■■■■□ 3.94
RDH13-217ENST00000591603 RB1CC1Q8TDY2 1594 aa39.66■■■■□ 3.94
RDH13-217ENST00000591603 NACADO15069 1562 aa39.54■■■■□ 3.92
RDH13-217ENST00000591603 MYO15BQ96JP2 1530 aa39.19■■■■□ 3.86
RDH13-217ENST00000591603 ZCCHC6Q5VYS8 1495 aaKnown RBP39.07■■■■□ 3.85
RDH13-217ENST00000591603 DCAF1Q9Y4B6 1507 aa38.89■■■■□ 3.82
RDH13-217ENST00000591603 PABPN1Q86U42 306 aaKnown RBP eCLIP38.71■■■■□ 3.79
RDH13-217ENST00000591603 UNC13AQ9UPW8 1703 aa38.49■■■■□ 3.75
RDH13-217ENST00000591603 BICRAQ9NZM4 1560 aa38.34■■■■□ 3.73
RDH13-217ENST00000591603 DNAJC5BQ9UF47 199 aa38.26■■■■□ 3.72
RDH13-217ENST00000591603 SCRIBQ14160 1630 aa38.21■■■■□ 3.71
RDH13-217ENST00000591603 SHROOM4Q9ULL8 1493 aa38.05■■■■□ 3.68
RDH13-217ENST00000591603 EIF4G1Q04637 1599 aaKnown RBP37.43■■■■□ 3.58
RDH13-217ENST00000591603 CC2D2AQ9P2K1 1620 aa37.35■■■■□ 3.57
RDH13-217ENST00000591603 CECR2Q9BXF3 1484 aa37.25■■■■□ 3.55
RDH13-217ENST00000591603 NCAPD3P42695 1498 aa36.52■■■■□ 3.44
RDH13-217ENST00000591603 BAZ1AQ9NRL2 1556 aaPredicted RBP36.5■■■■□ 3.43
RDH13-217ENST00000591603 SMARCA4P51532 1647 aa36.5■■■■□ 3.43
RDH13-217ENST00000591603 ATAD2BQ9ULI0 1458 aa36.46■■■■□ 3.43
RDH13-217ENST00000591603 SMARCA2P51531 1590 aa36.42■■■■□ 3.42
RDH13-217ENST00000591603 HMGXB3Q12766 1538 aa36.24■■■■□ 3.39
RDH13-217ENST00000591603 MROH2BQ7Z745 1585 aa36.21■■■■□ 3.39
RDH13-217ENST00000591603 BAZ1BQ9UIG0 1483 aaKnown RBP36.18■■■■□ 3.38
RDH13-217ENST00000591603 PEG3Q9GZU2 1588 aa36.15■■■■□ 3.38
RDH13-217ENST00000591603 ERCC6Q03468 1493 aa35.8■■■■□ 3.32
RDH13-217ENST00000591603 RSF1Q96T23 1441 aaPredicted RBP35.75■■■■□ 3.31
RDH13-217ENST00000591603 WIZO95785 1651 aa35.75■■■■□ 3.31
RDH13-217ENST00000591603 NESP48681 1621 aa35.66■■■■□ 3.3
RDH13-217ENST00000591603 LAMC3Q9Y6N6 1575 aa35.56■■■■□ 3.28
RDH13-217ENST00000591603 CADPSQ9ULU8 1353 aa35.49■■■■□ 3.27
RDH13-217ENST00000591603 PDS5BQ9NTI5 1447 aa35.46■■■■□ 3.27
RDH13-217ENST00000591603 CUX2O14529 1486 aa35.45■■■■□ 3.27
RDH13-217ENST00000591603 TOP2AP11388 1531 aaKnown RBP35.42■■■■□ 3.26
RDH13-217ENST00000591603 CFTRP13569 1480 aa35.15■■■■□ 3.22
RDH13-217ENST00000591603 KIF21AQ7Z4S6 1674 aa35.12■■■■□ 3.21
RDH13-217ENST00000591603 THOC2Q8NI27 1593 aaKnown RBP35.11■■■■□ 3.21
RDH13-217ENST00000591603 CCDC88BA6NC98 1476 aa35.04■■■■□ 3.2
RDH13-217ENST00000591603 FANCD2Q9BXW9 1451 aa35.03■■■■□ 3.2
RDH13-217ENST00000591603 CEP164Q9UPV0 1460 aa35.03■■■■□ 3.2
RDH13-217ENST00000591603 MRC2Q9UBG0 1479 aa35.03■■■■□ 3.2
RDH13-217ENST00000591603 WDR62O43379 1518 aa34.86■■■■□ 3.17
RDH13-217ENST00000591603 DNAJC5Q9H3Z4 198 aa34.81■■■■□ 3.16
RDH13-217ENST00000591603 SUPT5HO00267 1087 aaKnown RBP34.77■■■■□ 3.16
RDH13-217ENST00000591603 URB2Q14146 1524 aaKnown RBP34.63■■■■□ 3.13
RDH13-217ENST00000591603 PRDM2Q13029 1718 aa34.63■■■■□ 3.13
RDH13-217ENST00000591603 ABCC8Q09428 1581 aa34.49■■■■□ 3.11
RDH13-217ENST00000591603 TOPBP1Q92547 1522 aa34.4■■■■□ 3.1
RDH13-217ENST00000591603 IFT140Q96RY7 1462 aa34.33■■■■□ 3.09
RDH13-217ENST00000591603 DNMBPQ6XZF7 1577 aa34.32■■■■□ 3.08
RDH13-217ENST00000591603 ZNF608Q9ULD9 1512 aaPredicted RBP34.12■■■■□ 3.05
RDH13-217ENST00000591603 POLA1P09884 1462 aaPredicted RBP34.09■■■■□ 3.05
RDH13-217ENST00000591603 OSCARQ8IYS5 282 aa34.08■■■■□ 3.05
RDH13-217ENST00000591603 SOGA1O94964 1423 aa34.04■■■■□ 3.04
RDH13-217ENST00000591603 CUX1P39880 1505 aa33.99■■■■□ 3.03
RDH13-217ENST00000591603 FGD5Q6ZNL6 1462 aa33.97■■■■□ 3.03
RDH13-217ENST00000591603 TARBP1Q13395 1621 aaKnown RBP33.97■■■■□ 3.03
RDH13-217ENST00000591603 RAD54L2Q9Y4B4 1467 aa33.95■■■■□ 3.03
RDH13-217ENST00000591603 AQRO60306 1485 aaKnown RBP eCLIP33.95■■■■□ 3.02
RDH13-217ENST00000591603 EIF4G3O43432 1585 aaKnown RBP33.91■■■■□ 3.02
RDH13-217ENST00000591603 TDRD9Q8NDG6 1382 aaKnown RBP33.88■■■■□ 3.01
RDH13-217ENST00000591603 FBLN2P98095 1184 aa33.77■■■■□ 3
RDH13-217ENST00000591603 WRNQ14191 1432 aaPredicted RBP eCLIP33.77■■■■□ 3
RDH13-217ENST00000591603 WDR97A6NE52 1622 aa33.75■■■□□ 2.99
RDH13-217ENST00000591603 GRIN2BQ13224 1484 aa33.65■■■□□ 2.98
RDH13-217ENST00000591603 ABCA10Q8WWZ4 1543 aa33.63■■■□□ 2.97
RDH13-217ENST00000591603 CHMP7Q8WUX9 453 aaPredicted RBP33.62■■■□□ 2.97
RDH13-217ENST00000591603 GAPVD1Q14C86 1478 aa33.61■■■□□ 2.97
RDH13-217ENST00000591603 TOP2BQ02880 1626 aa33.61■■■□□ 2.97
RDH13-217ENST00000591603 SNAPC4Q5SXM2 1469 aa33.6■■■□□ 2.97
RDH13-217ENST00000591603 TRIM41Q8WV44 630 aa33.59■■■□□ 2.97
RDH13-217ENST00000591603 MAGI1Q96QZ7 1491 aaPredicted RBP33.57■■■□□ 2.97
RDH13-217ENST00000591603 BIVM-ERCC5R4GMW8 1640 aa33.55■■■□□ 2.96
RDH13-217ENST00000591603 SYNJ1O43426 1573 aa33.55■■■□□ 2.96
RDH13-217ENST00000591603 CHD1O14646 1710 aa33.48■■■□□ 2.95
RDH13-217ENST00000591603 SYNJ2O15056 1496 aa33.45■■■□□ 2.95
RDH13-217ENST00000591603 ABCA5Q8WWZ7 1642 aa33.42■■■□□ 2.94
RDH13-217ENST00000591603 PBRM1Q86U86 1689 aa33.36■■■□□ 2.93
RDH13-217ENST00000591603 ARHGEF11O15085 1522 aa33.34■■■□□ 2.93
RDH13-217ENST00000591603 RIMBP3CA6NJZ7 1639 aa33.31■■■□□ 2.92
RDH13-217ENST00000591603 RIMBP3BA6NNM3 1639 aa33.31■■■□□ 2.92
RDH13-217ENST00000591603 RIMBP3Q9UFD9 1639 aa33.31■■■□□ 2.92
RDH13-217ENST00000591603 FHAD1B1AJZ9 1412 aa33.23■■■□□ 2.91
RDH13-217ENST00000591603 ERICH3Q5RHP9 1530 aa33.23■■■□□ 2.91
RDH13-217ENST00000591603 CYB5RLQ6IPT4 315 aa33.22■■■□□ 2.91
RDH13-217ENST00000591603 CLASP1Q7Z460 1538 aa33.18■■■□□ 2.9
RDH13-217ENST00000591603 GRIN2AQ12879 1464 aa33.18■■■□□ 2.9
RDH13-217ENST00000591603 ADAMTS12P58397 1594 aa33.15■■■□□ 2.9
RDH13-217ENST00000591603 KIF27Q86VH2 1401 aa33.13■■■□□ 2.89
RDH13-217ENST00000591603 ARAP1Q96P48 1450 aa33.03■■■□□ 2.88
RDH13-217ENST00000591603 NUP160Q12769 1436 aa33.02■■■□□ 2.88
RDH13-217ENST00000591603 IGF1RP08069 1367 aa32.99■■■□□ 2.87
RDH13-217ENST00000591603 CEP170Q5SW79 1584 aa32.94■■■□□ 2.86
RDH13-217ENST00000591603 JPH4Q96JJ6 628 aa32.83■■■□□ 2.85
RDH13-217ENST00000591603 CARMIL1Q5VZK9 1371 aa32.83■■■□□ 2.85
RDH13-217ENST00000591603 CUL7Q14999 1698 aa32.82■■■□□ 2.84
RDH13-217ENST00000591603 PRG4Q92954 1404 aaPredicted RBP32.73■■■□□ 2.83
RDH13-217ENST00000591603 TRHP20396 242 aaPredicted RBP32.72■■■□□ 2.83
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms