RNA–Protein interactions for RNA: ENST00000591348.5

CROCCP3-206, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 3, humanhuman

TSL 1 (best)

Gene CROCCP3, Length 1,695 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3-206ENST00000591348 NISCHQ9Y2I1 1504 aa51.66■■■■■ 5.86
CROCCP3-206ENST00000591348 CCDC180Q9P1Z9 1646 aa45.57■■■■■ 4.89
CROCCP3-206ENST00000591348 ABCC9O60706 1549 aa43.95■■■■■ 4.63
CROCCP3-206ENST00000591348 ZCCHC6Q5VYS8 1495 aaKnown RBP43.19■■■■■ 4.5
CROCCP3-206ENST00000591348 DCAF8L2P0C7V8 631 aa42.97■■■■■ 4.47
CROCCP3-206ENST00000591348 DCAF1Q9Y4B6 1507 aa42.75■■■■■ 4.43
CROCCP3-206ENST00000591348 NACADO15069 1562 aa42.69■■■■■ 4.42
CROCCP3-206ENST00000591348 MYO15BQ96JP2 1530 aa42.65■■■■■ 4.42
CROCCP3-206ENST00000591348 RB1CC1Q8TDY2 1594 aa42.57■■■■■ 4.41
CROCCP3-206ENST00000591348 SCRIBQ14160 1630 aa41.7■■■■■ 4.27
CROCCP3-206ENST00000591348 UNC13AQ9UPW8 1703 aa41.58■■■■■ 4.25
CROCCP3-206ENST00000591348 SHROOM4Q9ULL8 1493 aa41.35■■■■■ 4.21
CROCCP3-206ENST00000591348 BICRAQ9NZM4 1560 aa41.22■■■■■ 4.19
CROCCP3-206ENST00000591348 PABPN1Q86U42 306 aaKnown RBP eCLIP41.21■■■■■ 4.19
CROCCP3-206ENST00000591348 CECR2Q9BXF3 1484 aa40.17■■■■■ 4.02
CROCCP3-206ENST00000591348 EIF4G1Q04637 1599 aaKnown RBP40.11■■■■■ 4.01
CROCCP3-206ENST00000591348 BAZ1AQ9NRL2 1556 aaPredicted RBP40■■■■□ 3.99
CROCCP3-206ENST00000591348 SMARCA4P51532 1647 aa39.93■■■■□ 3.98
CROCCP3-206ENST00000591348 MROH2BQ7Z745 1585 aa39.83■■■■□ 3.97
CROCCP3-206ENST00000591348 CC2D2AQ9P2K1 1620 aa39.76■■■■□ 3.96
CROCCP3-206ENST00000591348 RSF1Q96T23 1441 aaPredicted RBP39.65■■■■□ 3.94
CROCCP3-206ENST00000591348 DNAJC5BQ9UF47 199 aa39.64■■■■□ 3.94
CROCCP3-206ENST00000591348 ATAD2BQ9ULI0 1458 aa39.53■■■■□ 3.92
CROCCP3-206ENST00000591348 SMARCA2P51531 1590 aa39.53■■■■□ 3.92
CROCCP3-206ENST00000591348 PEG3Q9GZU2 1588 aa39.5■■■■□ 3.91
CROCCP3-206ENST00000591348 WIZO95785 1651 aa39.45■■■■□ 3.91
CROCCP3-206ENST00000591348 NCAPD3P42695 1498 aa39.38■■■■□ 3.89
CROCCP3-206ENST00000591348 SUPT5HO00267 1087 aaKnown RBP39.3■■■■□ 3.88
CROCCP3-206ENST00000591348 BAZ1BQ9UIG0 1483 aaKnown RBP39.27■■■■□ 3.88
CROCCP3-206ENST00000591348 HMGXB3Q12766 1538 aa39.26■■■■□ 3.88
CROCCP3-206ENST00000591348 TOP2AP11388 1531 aaKnown RBP39.07■■■■□ 3.84
CROCCP3-206ENST00000591348 CCDC88BA6NC98 1476 aa38.62■■■■□ 3.77
CROCCP3-206ENST00000591348 CADPSQ9ULU8 1353 aa38.31■■■■□ 3.72
CROCCP3-206ENST00000591348 NESP48681 1621 aa38.24■■■■□ 3.71
CROCCP3-206ENST00000591348 LAMC3Q9Y6N6 1575 aa38.24■■■■□ 3.71
CROCCP3-206ENST00000591348 CFTRP13569 1480 aa38.22■■■■□ 3.71
CROCCP3-206ENST00000591348 PDS5BQ9NTI5 1447 aa37.99■■■■□ 3.67
CROCCP3-206ENST00000591348 PRDM2Q13029 1718 aa37.96■■■■□ 3.67
CROCCP3-206ENST00000591348 FANCD2Q9BXW9 1451 aa37.87■■■■□ 3.65
CROCCP3-206ENST00000591348 ERCC6Q03468 1493 aa37.85■■■■□ 3.65
CROCCP3-206ENST00000591348 KIF21AQ7Z4S6 1674 aa37.79■■■■□ 3.64
CROCCP3-206ENST00000591348 CEP164Q9UPV0 1460 aa37.76■■■■□ 3.63
CROCCP3-206ENST00000591348 MRC2Q9UBG0 1479 aa37.53■■■■□ 3.6
CROCCP3-206ENST00000591348 THOC2Q8NI27 1593 aaKnown RBP37.47■■■■□ 3.59
CROCCP3-206ENST00000591348 ABCC8Q09428 1581 aa37.45■■■■□ 3.59
CROCCP3-206ENST00000591348 URB2Q14146 1524 aaKnown RBP37.43■■■■□ 3.58
CROCCP3-206ENST00000591348 WRNQ14191 1432 aaPredicted RBP eCLIP37.39■■■■□ 3.58
CROCCP3-206ENST00000591348 WDR62O43379 1518 aa37.36■■■■□ 3.57
CROCCP3-206ENST00000591348 DNMBPQ6XZF7 1577 aa37.35■■■■□ 3.57
CROCCP3-206ENST00000591348 TOPBP1Q92547 1522 aa37.34■■■■□ 3.57
CROCCP3-206ENST00000591348 CUX1P39880 1505 aa37.33■■■■□ 3.57
CROCCP3-206ENST00000591348 SYNJ1O43426 1573 aa37.23■■■■□ 3.55
CROCCP3-206ENST00000591348 TOP2BQ02880 1626 aa37.2■■■■□ 3.55
CROCCP3-206ENST00000591348 BIVM-ERCC5R4GMW8 1640 aa37.17■■■■□ 3.54
CROCCP3-206ENST00000591348 CUX2O14529 1486 aa37.12■■■■□ 3.53
CROCCP3-206ENST00000591348 FGD5Q6ZNL6 1462 aa37.1■■■■□ 3.53
CROCCP3-206ENST00000591348 POLA1P09884 1462 aaPredicted RBP37.08■■■■□ 3.53
CROCCP3-206ENST00000591348 CHIC1Q5VXU3 224 aa37.06■■■■□ 3.52
CROCCP3-206ENST00000591348 TRIM41Q8WV44 630 aa37.06■■■■□ 3.52
CROCCP3-206ENST00000591348 SOGA1O94964 1423 aa36.95■■■■□ 3.51
CROCCP3-206ENST00000591348 IFT140Q96RY7 1462 aa36.92■■■■□ 3.5
CROCCP3-206ENST00000591348 RAD54L2Q9Y4B4 1467 aa36.92■■■■□ 3.5
CROCCP3-206ENST00000591348 TARBP1Q13395 1621 aaKnown RBP36.84■■■■□ 3.49
CROCCP3-206ENST00000591348 ABCA10Q8WWZ4 1543 aa36.77■■■■□ 3.48
CROCCP3-206ENST00000591348 WDR97A6NE52 1622 aa36.71■■■■□ 3.47
CROCCP3-206ENST00000591348 ZNF608Q9ULD9 1512 aaPredicted RBP36.7■■■■□ 3.46
CROCCP3-206ENST00000591348 TDRD9Q8NDG6 1382 aaKnown RBP36.66■■■■□ 3.46
CROCCP3-206ENST00000591348 AQRO60306 1485 aaKnown RBP eCLIP36.6■■■■□ 3.45
CROCCP3-206ENST00000591348 EIF4G3O43432 1585 aaKnown RBP36.58■■■■□ 3.45
CROCCP3-206ENST00000591348 KIF27Q86VH2 1401 aa36.56■■■■□ 3.44
CROCCP3-206ENST00000591348 ABCA5Q8WWZ7 1642 aa36.54■■■■□ 3.44
CROCCP3-206ENST00000591348 GAPVD1Q14C86 1478 aa36.54■■■■□ 3.44
CROCCP3-206ENST00000591348 RUSC2Q8N2Y8 1516 aa36.43■■■■□ 3.42
CROCCP3-206ENST00000591348 GRIN2BQ13224 1484 aa36.42■■■■□ 3.42
CROCCP3-206ENST00000591348 PBRM1Q86U86 1689 aa36.38■■■■□ 3.41
CROCCP3-206ENST00000591348 EEA1Q15075 1411 aa36.34■■■■□ 3.41
CROCCP3-206ENST00000591348 ERICH3Q5RHP9 1530 aa36.34■■■■□ 3.41
CROCCP3-206ENST00000591348 IGF1RP08069 1367 aa36.29■■■■□ 3.4
CROCCP3-206ENST00000591348 FAM9AQ8IZU1 332 aaPredicted RBP36.29■■■■□ 3.4
CROCCP3-206ENST00000591348 SNAPC4Q5SXM2 1469 aa36.28■■■■□ 3.4
CROCCP3-206ENST00000591348 MAGI1Q96QZ7 1491 aaPredicted RBP36.25■■■■□ 3.39
CROCCP3-206ENST00000591348 CSRNP3Q8WYN3 585 aa36.2■■■■□ 3.39
CROCCP3-206ENST00000591348 CUL7Q14999 1698 aa36.15■■■■□ 3.38
CROCCP3-206ENST00000591348 ADAMTS12P58397 1594 aa36.15■■■■□ 3.38
CROCCP3-206ENST00000591348 FHAD1B1AJZ9 1412 aa36.14■■■■□ 3.38
CROCCP3-206ENST00000591348 CARMIL1Q5VZK9 1371 aa36.12■■■■□ 3.37
CROCCP3-206ENST00000591348 SYNJ2O15056 1496 aa36.1■■■■□ 3.37
CROCCP3-206ENST00000591348 FBLN2P98095 1184 aa36.08■■■■□ 3.37
CROCCP3-206ENST00000591348 CHMP7Q8WUX9 453 aaPredicted RBP36.07■■■■□ 3.37
CROCCP3-206ENST00000591348 PRXQ9BXM0 1461 aa36.02■■■■□ 3.36
CROCCP3-206ENST00000591348 RAPGEF2Q9Y4G8 1499 aa35.98■■■■□ 3.35
CROCCP3-206ENST00000591348 CHD1O14646 1710 aa35.96■■■■□ 3.35
CROCCP3-206ENST00000591348 GRIN2AQ12879 1464 aa35.95■■■■□ 3.35
CROCCP3-206ENST00000591348 KIF21BO75037 1637 aa35.89■■■■□ 3.34
CROCCP3-206ENST00000591348 EHMT2Q96KQ7 1210 aa35.8■■■■□ 3.32
CROCCP3-206ENST00000591348 GOLGA3Q08378 1498 aa35.77■■■■□ 3.32
CROCCP3-206ENST00000591348 OSCARQ8IYS5 282 aa35.77■■■■□ 3.32
CROCCP3-206ENST00000591348 NUP160Q12769 1436 aa35.74■■■■□ 3.31
CROCCP3-206ENST00000591348 CEP170Q5SW79 1584 aa35.73■■■■□ 3.31
CROCCP3-206ENST00000591348 UBTFP17480 764 aaKnown RBP35.66■■■■□ 3.3
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms