RNA–Protein interactions for RNA: ENST00000590984.1

GRN-217, Transcript of granulin precursor, humanhuman

TSL 2

Gene GRN, Length 562 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRN-217ENST00000590984 NISCHQ9Y2I1 1504 aa31.91■■■□□ 2.7
GRN-217ENST00000590984 CCDC180Q9P1Z9 1646 aa28.24■■■□□ 2.11
GRN-217ENST00000590984 ABCC9O60706 1549 aa27.37■■□□□ 1.97
GRN-217ENST00000590984 ZCCHC6Q5VYS8 1495 aaKnown RBP26.65■■□□□ 1.86
GRN-217ENST00000590984 DCAF8L2P0C7V8 631 aa26.49■■□□□ 1.83
GRN-217ENST00000590984 NACADO15069 1562 aa26.41■■□□□ 1.82
GRN-217ENST00000590984 RB1CC1Q8TDY2 1594 aa26.38■■□□□ 1.81
GRN-217ENST00000590984 DCAF1Q9Y4B6 1507 aa26.35■■□□□ 1.81
GRN-217ENST00000590984 MYO15BQ96JP2 1530 aa26.31■■□□□ 1.8
GRN-217ENST00000590984 UNC13AQ9UPW8 1703 aa26.04■■□□□ 1.76
GRN-217ENST00000590984 SCRIBQ14160 1630 aa25.86■■□□□ 1.73
GRN-217ENST00000590984 BICRAQ9NZM4 1560 aa25.72■■□□□ 1.71
GRN-217ENST00000590984 PABPN1Q86U42 306 aaKnown RBP eCLIP25.63■■□□□ 1.69
GRN-217ENST00000590984 SHROOM4Q9ULL8 1493 aa25.47■■□□□ 1.67
GRN-217ENST00000590984 EIF4G1Q04637 1599 aaKnown RBP24.94■■□□□ 1.58
GRN-217ENST00000590984 DNAJC5BQ9UF47 199 aa24.92■■□□□ 1.58
GRN-217ENST00000590984 CECR2Q9BXF3 1484 aa24.9■■□□□ 1.58
GRN-217ENST00000590984 CC2D2AQ9P2K1 1620 aa24.79■■□□□ 1.56
GRN-217ENST00000590984 SMARCA4P51532 1647 aa24.73■■□□□ 1.55
GRN-217ENST00000590984 MROH2BQ7Z745 1585 aa24.67■■□□□ 1.54
GRN-217ENST00000590984 BAZ1AQ9NRL2 1556 aaPredicted RBP24.67■■□□□ 1.54
GRN-217ENST00000590984 ATAD2BQ9ULI0 1458 aa24.48■■□□□ 1.51
GRN-217ENST00000590984 WIZO95785 1651 aa24.46■■□□□ 1.51
GRN-217ENST00000590984 PEG3Q9GZU2 1588 aa24.44■■□□□ 1.5
GRN-217ENST00000590984 RSF1Q96T23 1441 aaPredicted RBP24.44■■□□□ 1.5
GRN-217ENST00000590984 SMARCA2P51531 1590 aa24.42■■□□□ 1.5
GRN-217ENST00000590984 NCAPD3P42695 1498 aa24.38■■□□□ 1.49
GRN-217ENST00000590984 HMGXB3Q12766 1538 aa24.3■■□□□ 1.48
GRN-217ENST00000590984 BAZ1BQ9UIG0 1483 aaKnown RBP24.26■■□□□ 1.47
GRN-217ENST00000590984 TOP2AP11388 1531 aaKnown RBP24.11■■□□□ 1.45
GRN-217ENST00000590984 SUPT5HO00267 1087 aaKnown RBP24.04■■□□□ 1.44
GRN-217ENST00000590984 CCDC88BA6NC98 1476 aa23.85■■□□□ 1.41
GRN-217ENST00000590984 NESP48681 1621 aa23.84■■□□□ 1.41
GRN-217ENST00000590984 LAMC3Q9Y6N6 1575 aa23.69■■□□□ 1.38
GRN-217ENST00000590984 CADPSQ9ULU8 1353 aa23.67■■□□□ 1.38
GRN-217ENST00000590984 CFTRP13569 1480 aa23.62■■□□□ 1.37
GRN-217ENST00000590984 PRDM2Q13029 1718 aa23.6■■□□□ 1.37
GRN-217ENST00000590984 KIF21AQ7Z4S6 1674 aa23.6■■□□□ 1.37
GRN-217ENST00000590984 ERCC6Q03468 1493 aa23.48■■□□□ 1.35
GRN-217ENST00000590984 PDS5BQ9NTI5 1447 aa23.46■■□□□ 1.35
GRN-217ENST00000590984 FANCD2Q9BXW9 1451 aa23.44■■□□□ 1.34
GRN-217ENST00000590984 THOC2Q8NI27 1593 aaKnown RBP23.39■■□□□ 1.33
GRN-217ENST00000590984 CEP164Q9UPV0 1460 aa23.36■■□□□ 1.33
GRN-217ENST00000590984 MRC2Q9UBG0 1479 aa23.27■■□□□ 1.32
GRN-217ENST00000590984 URB2Q14146 1524 aaKnown RBP23.25■■□□□ 1.31
GRN-217ENST00000590984 WDR62O43379 1518 aa23.22■■□□□ 1.31
GRN-217ENST00000590984 ABCC8Q09428 1581 aa23.14■■□□□ 1.3
GRN-217ENST00000590984 TOPBP1Q92547 1522 aa23.13■■□□□ 1.29
GRN-217ENST00000590984 CUX1P39880 1505 aa23.12■■□□□ 1.29
GRN-217ENST00000590984 DNMBPQ6XZF7 1577 aa23.11■■□□□ 1.29
GRN-217ENST00000590984 CUX2O14529 1486 aa23.1■■□□□ 1.29
GRN-217ENST00000590984 SYNJ1O43426 1573 aa23.03■■□□□ 1.28
GRN-217ENST00000590984 WRNQ14191 1432 aaPredicted RBP eCLIP22.99■■□□□ 1.27
GRN-217ENST00000590984 BIVM-ERCC5R4GMW8 1640 aa22.98■■□□□ 1.27
GRN-217ENST00000590984 TOP2BQ02880 1626 aa22.96■■□□□ 1.27
GRN-217ENST00000590984 POLA1P09884 1462 aaPredicted RBP22.95■■□□□ 1.26
GRN-217ENST00000590984 FGD5Q6ZNL6 1462 aa22.94■■□□□ 1.26
GRN-217ENST00000590984 TARBP1Q13395 1621 aaKnown RBP22.9■■□□□ 1.26
GRN-217ENST00000590984 RAD54L2Q9Y4B4 1467 aa22.89■■□□□ 1.25
GRN-217ENST00000590984 ZNF608Q9ULD9 1512 aaPredicted RBP22.83■■□□□ 1.25
GRN-217ENST00000590984 IFT140Q96RY7 1462 aa22.83■■□□□ 1.25
GRN-217ENST00000590984 WDR97A6NE52 1622 aa22.82■■□□□ 1.24
GRN-217ENST00000590984 SOGA1O94964 1423 aa22.81■■□□□ 1.24
GRN-217ENST00000590984 EIF4G3O43432 1585 aaKnown RBP22.74■■□□□ 1.23
GRN-217ENST00000590984 AQRO60306 1485 aaKnown RBP eCLIP22.71■■□□□ 1.232e-6■■■■■ 26.9
GRN-217ENST00000590984 ABCA10Q8WWZ4 1543 aa22.7■■□□□ 1.22
GRN-217ENST00000590984 TDRD9Q8NDG6 1382 aaKnown RBP22.69■■□□□ 1.22
GRN-217ENST00000590984 ABCA5Q8WWZ7 1642 aa22.65■■□□□ 1.22
GRN-217ENST00000590984 CHIC1Q5VXU3 224 aa22.63■■□□□ 1.21
GRN-217ENST00000590984 PBRM1Q86U86 1689 aa22.62■■□□□ 1.21
GRN-217ENST00000590984 TRIM41Q8WV44 630 aa22.61■■□□□ 1.21
GRN-217ENST00000590984 GAPVD1Q14C86 1478 aa22.56■■□□□ 1.2
GRN-217ENST00000590984 RUSC2Q8N2Y8 1516 aa22.52■■□□□ 1.19
GRN-217ENST00000590984 GRIN2BQ13224 1484 aa22.49■■□□□ 1.19
GRN-217ENST00000590984 SNAPC4Q5SXM2 1469 aa22.48■■□□□ 1.19
GRN-217ENST00000590984 CHD1O14646 1710 aa22.47■■□□□ 1.19
GRN-217ENST00000590984 KIF27Q86VH2 1401 aa22.44■■□□□ 1.18
GRN-217ENST00000590984 ERICH3Q5RHP9 1530 aa22.41■■□□□ 1.18
GRN-217ENST00000590984 ADAMTS12P58397 1594 aa22.4■■□□□ 1.18
GRN-217ENST00000590984 MAGI1Q96QZ7 1491 aaPredicted RBP22.4■■□□□ 1.18
GRN-217ENST00000590984 IGF1RP08069 1367 aa22.38■■□□□ 1.17
GRN-217ENST00000590984 SYNJ2O15056 1496 aa22.32■■□□□ 1.16
GRN-217ENST00000590984 CUL7Q14999 1698 aa22.3■■□□□ 1.16
GRN-217ENST00000590984 FBLN2P98095 1184 aa22.29■■□□□ 1.16
GRN-217ENST00000590984 FHAD1B1AJZ9 1412 aa22.28■■□□□ 1.16
GRN-217ENST00000590984 GRIN2AQ12879 1464 aa22.24■■□□□ 1.15
GRN-217ENST00000590984 FAM9AQ8IZU1 332 aaPredicted RBP22.24■■□□□ 1.15
GRN-217ENST00000590984 CHMP7Q8WUX9 453 aaPredicted RBP22.24■■□□□ 1.15
GRN-217ENST00000590984 CARMIL1Q5VZK9 1371 aa22.22■■□□□ 1.15
GRN-217ENST00000590984 CEP170Q5SW79 1584 aa22.2■■□□□ 1.14
GRN-217ENST00000590984 OSCARQ8IYS5 282 aa22.17■■□□□ 1.14
GRN-217ENST00000590984 PRXQ9BXM0 1461 aa22.15■■□□□ 1.14
GRN-217ENST00000590984 EEA1Q15075 1411 aa22.15■■□□□ 1.14
GRN-217ENST00000590984 CSRNP3Q8WYN3 585 aa22.15■■□□□ 1.14
GRN-217ENST00000590984 CLASP1Q7Z460 1538 aa22.14■■□□□ 1.13
GRN-217ENST00000590984 NUP160Q12769 1436 aa22.13■■□□□ 1.13
GRN-217ENST00000590984 RAPGEF2Q9Y4G8 1499 aa22.11■■□□□ 1.13
GRN-217ENST00000590984 DNAJC5Q9H3Z4 198 aa22.07■■□□□ 1.12
GRN-217ENST00000590984 KIF21BO75037 1637 aa22.04■■□□□ 1.12
GRN-217ENST00000590984 CTTNBP2Q8WZ74 1663 aa22.01■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms