RNA–Protein interactions for RNA: ENST00000590870.5

C18orf8-209, Transcript of Uncharacterized protein C18orf8, humanhuman

TSL 5

Gene C18orf8, Length 2,102 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C18orf8-209ENST00000590870 NISCHQ9Y2I1 1504 aa44.22■■■■■ 4.67
C18orf8-209ENST00000590870 CCDC180Q9P1Z9 1646 aa38.66■■■■□ 3.78
C18orf8-209ENST00000590870 ZCCHC6Q5VYS8 1495 aaKnown RBP37.07■■■■□ 3.52
C18orf8-209ENST00000590870 ABCC9O60706 1549 aa37.06■■■■□ 3.52
C18orf8-209ENST00000590870 DCAF8L2P0C7V8 631 aa36.85■■■■□ 3.49
C18orf8-209ENST00000590870 DCAF1Q9Y4B6 1507 aa36.43■■■■□ 3.42
C18orf8-209ENST00000590870 MYO15BQ96JP2 1530 aa36.09■■■■□ 3.37
C18orf8-209ENST00000590870 NACADO15069 1562 aa36.08■■■■□ 3.37
C18orf8-209ENST00000590870 SHROOM4Q9ULL8 1493 aa36.08■■■■□ 3.37
C18orf8-209ENST00000590870 RB1CC1Q8TDY2 1594 aa35.89■■■■□ 3.34
C18orf8-209ENST00000590870 SCRIBQ14160 1630 aa35.69■■■■□ 3.3
C18orf8-209ENST00000590870 UNC13AQ9UPW8 1703 aa35.32■■■■□ 3.25
C18orf8-209ENST00000590870 PABPN1Q86U42 306 aaKnown RBP eCLIP34.92■■■■□ 3.18
C18orf8-209ENST00000590870 BICRAQ9NZM4 1560 aa34.89■■■■□ 3.18
C18orf8-209ENST00000590870 SUPT5HO00267 1087 aaKnown RBP34.5■■■■□ 3.11
C18orf8-209ENST00000590870 CECR2Q9BXF3 1484 aa34.5■■■■□ 3.11
C18orf8-209ENST00000590870 MROH2BQ7Z745 1585 aa34.23■■■■□ 3.07
C18orf8-209ENST00000590870 RSF1Q96T23 1441 aaPredicted RBP34.2■■■■□ 3.07
C18orf8-209ENST00000590870 BAZ1AQ9NRL2 1556 aaPredicted RBP34.15■■■■□ 3.06
C18orf8-209ENST00000590870 SMARCA4P51532 1647 aa34.1■■■■□ 3.05
C18orf8-209ENST00000590870 WIZO95785 1651 aa33.98■■■■□ 3.03
C18orf8-209ENST00000590870 EIF4G1Q04637 1599 aaKnown RBP33.86■■■■□ 3.01
C18orf8-209ENST00000590870 ATAD2BQ9ULI0 1458 aa33.6■■■□□ 2.97
C18orf8-209ENST00000590870 PEG3Q9GZU2 1588 aa33.6■■■□□ 2.97
C18orf8-209ENST00000590870 SMARCA2P51531 1590 aa33.52■■■□□ 2.96
C18orf8-209ENST00000590870 TOP2AP11388 1531 aaKnown RBP33.49■■■□□ 2.95
C18orf8-209ENST00000590870 CC2D2AQ9P2K1 1620 aa33.48■■■□□ 2.95
C18orf8-209ENST00000590870 BAZ1BQ9UIG0 1483 aaKnown RBP33.41■■■□□ 2.94
C18orf8-209ENST00000590870 NCAPD3P42695 1498 aa33.31■■■□□ 2.92
C18orf8-209ENST00000590870 HMGXB3Q12766 1538 aa33.23■■■□□ 2.91
C18orf8-209ENST00000590870 CCDC88BA6NC98 1476 aa33.2■■■□□ 2.91
C18orf8-209ENST00000590870 DNAJC5BQ9UF47 199 aa33.04■■■□□ 2.88
C18orf8-209ENST00000590870 CHIC1Q5VXU3 224 aa32.75■■■□□ 2.83
C18orf8-209ENST00000590870 CFTRP13569 1480 aa32.51■■■□□ 2.79
C18orf8-209ENST00000590870 ABCC8Q09428 1581 aa32.49■■■□□ 2.79
C18orf8-209ENST00000590870 CADPSQ9ULU8 1353 aa32.47■■■□□ 2.79
C18orf8-209ENST00000590870 NESP48681 1621 aa32.45■■■□□ 2.78
C18orf8-209ENST00000590870 PRDM2Q13029 1718 aa32.37■■■□□ 2.77
C18orf8-209ENST00000590870 TRIM41Q8WV44 630 aa32.36■■■□□ 2.77
C18orf8-209ENST00000590870 LAMC3Q9Y6N6 1575 aa32.26■■■□□ 2.75
C18orf8-209ENST00000590870 WRNQ14191 1432 aaPredicted RBP eCLIP32.2■■■□□ 2.75
C18orf8-209ENST00000590870 FANCD2Q9BXW9 1451 aa32.16■■■□□ 2.74
C18orf8-209ENST00000590870 SYNJ1O43426 1573 aa32.15■■■□□ 2.74
C18orf8-209ENST00000590870 KIF21AQ7Z4S6 1674 aa32.04■■■□□ 2.72
C18orf8-209ENST00000590870 CUX1P39880 1505 aa32.01■■■□□ 2.71
C18orf8-209ENST00000590870 PDS5BQ9NTI5 1447 aa32.01■■■□□ 2.71
C18orf8-209ENST00000590870 CEP164Q9UPV0 1460 aa31.97■■■□□ 2.71
C18orf8-209ENST00000590870 TOP2BQ02880 1626 aa31.97■■■□□ 2.71
C18orf8-209ENST00000590870 BIVM-ERCC5R4GMW8 1640 aa31.94■■■□□ 2.7
C18orf8-209ENST00000590870 FAM9AQ8IZU1 332 aaPredicted RBP31.91■■■□□ 2.7
C18orf8-209ENST00000590870 URB2Q14146 1524 aaKnown RBP31.8■■■□□ 2.68
C18orf8-209ENST00000590870 SOGA1O94964 1423 aa31.78■■■□□ 2.68
C18orf8-209ENST00000590870 DNMBPQ6XZF7 1577 aa31.77■■■□□ 2.68
C18orf8-209ENST00000590870 TOPBP1Q92547 1522 aa31.77■■■□□ 2.68
C18orf8-209ENST00000590870 ERCC6Q03468 1493 aa31.75■■■□□ 2.67
C18orf8-209ENST00000590870 RUSC2Q8N2Y8 1516 aa31.72■■■□□ 2.67
C18orf8-209ENST00000590870 FGD5Q6ZNL6 1462 aa31.72■■■□□ 2.67
C18orf8-209ENST00000590870 MRC2Q9UBG0 1479 aa31.64■■■□□ 2.66
C18orf8-209ENST00000590870 LOC105371045A0A1W2PR82 267 aa31.6■■■□□ 2.65
C18orf8-209ENST00000590870 EHMT2Q96KQ7 1210 aa31.6■■■□□ 2.65
C18orf8-209ENST00000590870 POLA1P09884 1462 aaPredicted RBP31.6■■■□□ 2.65
C18orf8-209ENST00000590870 RAD54L2Q9Y4B4 1467 aa31.56■■■□□ 2.64
C18orf8-209ENST00000590870 THOC2Q8NI27 1593 aaKnown RBP31.53■■■□□ 2.64
C18orf8-209ENST00000590870 WDR62O43379 1518 aa31.49■■■□□ 2.63
C18orf8-209ENST00000590870 CUX2O14529 1486 aa31.45■■■□□ 2.62
C18orf8-209ENST00000590870 EEA1Q15075 1411 aa31.43■■■□□ 2.62
C18orf8-209ENST00000590870 CSRNP3Q8WYN3 585 aa31.42■■■□□ 2.62
C18orf8-209ENST00000590870 KIF27Q86VH2 1401 aa31.38■■■□□ 2.61
C18orf8-209ENST00000590870 ABCA10Q8WWZ4 1543 aa31.35■■■□□ 2.61
C18orf8-209ENST00000590870 WDR97A6NE52 1622 aa31.34■■■□□ 2.61
C18orf8-209ENST00000590870 TARBP1Q13395 1621 aaKnown RBP31.33■■■□□ 2.61
C18orf8-209ENST00000590870 TDRD9Q8NDG6 1382 aaKnown RBP31.28■■■□□ 2.6
C18orf8-209ENST00000590870 IFT140Q96RY7 1462 aa31.18■■■□□ 2.58
C18orf8-209ENST00000590870 ABCA5Q8WWZ7 1642 aa31.17■■■□□ 2.58
C18orf8-209ENST00000590870 IGF1RP08069 1367 aa31.17■■■□□ 2.58
C18orf8-209ENST00000590870 ZNF608Q9ULD9 1512 aaPredicted RBP31.16■■■□□ 2.58
C18orf8-209ENST00000590870 AQRO60306 1485 aaKnown RBP eCLIP31.14■■■□□ 2.584e-6■■■■■ 31
C18orf8-209ENST00000590870 KIF21BO75037 1637 aa31.13■■■□□ 2.57
C18orf8-209ENST00000590870 GAPVD1Q14C86 1478 aa31.13■■■□□ 2.57
C18orf8-209ENST00000590870 RAPGEF2Q9Y4G8 1499 aa31.12■■■□□ 2.57
C18orf8-209ENST00000590870 GOLGA3Q08378 1498 aa31.08■■■□□ 2.57
C18orf8-209ENST00000590870 PRXQ9BXM0 1461 aa31.08■■■□□ 2.57
C18orf8-209ENST00000590870 UBTFP17480 764 aaKnown RBP31.07■■■□□ 2.56
C18orf8-209ENST00000590870 PBRM1Q86U86 1689 aa31.03■■■□□ 2.56
C18orf8-209ENST00000590870 EIF4G3O43432 1585 aaKnown RBP31.01■■■□□ 2.56
C18orf8-209ENST00000590870 CARMIL1Q5VZK9 1371 aa31.01■■■□□ 2.56
C18orf8-209ENST00000590870 ERICH3Q5RHP9 1530 aa30.97■■■□□ 2.55
C18orf8-209ENST00000590870 CUL7Q14999 1698 aa30.92■■■□□ 2.54
C18orf8-209ENST00000590870 GRIN2BQ13224 1484 aa30.9■■■□□ 2.54
C18orf8-209ENST00000590870 TNIKQ9UKE5 1360 aa30.89■■■□□ 2.54
C18orf8-209ENST00000590870 RANGAP1P46060 587 aaPredicted RBP30.84■■■□□ 2.53
C18orf8-209ENST00000590870 SNAPC4Q5SXM2 1469 aa30.81■■■□□ 2.52
C18orf8-209ENST00000590870 ADAMTS12P58397 1594 aa30.79■■■□□ 2.52
C18orf8-209ENST00000590870 CEP162Q5TB80 1403 aa30.78■■■□□ 2.52
C18orf8-209ENST00000590870 FHAD1B1AJZ9 1412 aa30.73■■■□□ 2.51
C18orf8-209ENST00000590870 MAGI1Q96QZ7 1491 aaPredicted RBP30.65■■■□□ 2.5
C18orf8-209ENST00000590870 FBLN2P98095 1184 aa30.63■■■□□ 2.49
C18orf8-209ENST00000590870 CTTNBP2Q8WZ74 1663 aa30.61■■■□□ 2.49
C18orf8-209ENST00000590870 CLIP1P30622 1438 aa30.61■■■□□ 2.49
C18orf8-209ENST00000590870 CHMP7Q8WUX9 453 aaPredicted RBP30.58■■■□□ 2.49
Retrieved 100 of 20,778 RNA–protein pairs in 90.5 ms