RNA–Protein interactions for RNA: ENST00000590542.1

NLRP8-202, Transcript of NLR family pyrin domain containing 8, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NLRP8, Length 3,090 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLRP8-202ENST00000590542 NISCHQ9Y2I1 1504 aa17.45■□□□□ 0.38
NLRP8-202ENST00000590542 CCDC180Q9P1Z9 1646 aa15.03■□□□□ -0
NLRP8-202ENST00000590542 ZCCHC6Q5VYS8 1495 aaKnown RBP14.67□□□□□ -0.06
NLRP8-202ENST00000590542 DCAF8L2P0C7V8 631 aa14.61□□□□□ -0.07
NLRP8-202ENST00000590542 SHROOM4Q9ULL8 1493 aa14.57□□□□□ -0.08
NLRP8-202ENST00000590542 ABCC9O60706 1549 aa14.33□□□□□ -0.12
NLRP8-202ENST00000590542 DCAF1Q9Y4B6 1507 aa14.31□□□□□ -0.12
NLRP8-202ENST00000590542 SUPT5HO00267 1087 aaKnown RBP14.07□□□□□ -0.16
NLRP8-202ENST00000590542 MYO15BQ96JP2 1530 aa14.06□□□□□ -0.16
NLRP8-202ENST00000590542 SCRIBQ14160 1630 aa14.03□□□□□ -0.16
NLRP8-202ENST00000590542 NACADO15069 1562 aa14.01□□□□□ -0.17
NLRP8-202ENST00000590542 RB1CC1Q8TDY2 1594 aa13.88□□□□□ -0.19
NLRP8-202ENST00000590542 CECR2Q9BXF3 1484 aa13.65□□□□□ -0.22
NLRP8-202ENST00000590542 UNC13AQ9UPW8 1703 aa13.64□□□□□ -0.23
NLRP8-202ENST00000590542 RSF1Q96T23 1441 aaPredicted RBP13.64□□□□□ -0.23
NLRP8-202ENST00000590542 PABPN1Q86U42 306 aaKnown RBP eCLIP13.62□□□□□ -0.23
NLRP8-202ENST00000590542 MROH2BQ7Z745 1585 aa13.55□□□□□ -0.24
NLRP8-202ENST00000590542 BICRAQ9NZM4 1560 aa13.52□□□□□ -0.25
NLRP8-202ENST00000590542 CHIC1Q5VXU3 224 aa13.46□□□□□ -0.25
NLRP8-202ENST00000590542 WIZO95785 1651 aa13.45□□□□□ -0.26
NLRP8-202ENST00000590542 BAZ1AQ9NRL2 1556 aaPredicted RBP13.43□□□□□ -0.26
NLRP8-202ENST00000590542 SMARCA4P51532 1647 aa13.38□□□□□ -0.27
NLRP8-202ENST00000590542 TOP2AP11388 1531 aaKnown RBP13.23□□□□□ -0.29
NLRP8-202ENST00000590542 CCDC88BA6NC98 1476 aa13.17□□□□□ -0.3
NLRP8-202ENST00000590542 ATAD2BQ9ULI0 1458 aa13.15□□□□□ -0.3
NLRP8-202ENST00000590542 SMARCA2P51531 1590 aa13.14□□□□□ -0.31
NLRP8-202ENST00000590542 PEG3Q9GZU2 1588 aa13.13□□□□□ -0.31
NLRP8-202ENST00000590542 TRIM41Q8WV44 630 aa13.13□□□□□ -0.31
NLRP8-202ENST00000590542 EIF4G1Q04637 1599 aaKnown RBP13.1□□□□□ -0.31
NLRP8-202ENST00000590542 BAZ1BQ9UIG0 1483 aaKnown RBP13.09□□□□□ -0.31
NLRP8-202ENST00000590542 LOC105371045A0A1W2PR82 267 aa13.05□□□□□ -0.32
NLRP8-202ENST00000590542 FAM9AQ8IZU1 332 aaPredicted RBP13.02□□□□□ -0.32
NLRP8-202ENST00000590542 ABCC8Q09428 1581 aa12.99□□□□□ -0.33
NLRP8-202ENST00000590542 NCAPD3P42695 1498 aa12.97□□□□□ -0.33
NLRP8-202ENST00000590542 EHMT2Q96KQ7 1210 aa12.93□□□□□ -0.34
NLRP8-202ENST00000590542 HMGXB3Q12766 1538 aa12.92□□□□□ -0.34
NLRP8-202ENST00000590542 CC2D2AQ9P2K1 1620 aa12.89□□□□□ -0.35
NLRP8-202ENST00000590542 WRNQ14191 1432 aaPredicted RBP eCLIP12.83□□□□□ -0.36
NLRP8-202ENST00000590542 SOGA1O94964 1423 aa12.79□□□□□ -0.36
NLRP8-202ENST00000590542 SYNJ1O43426 1573 aa12.78□□□□□ -0.36
NLRP8-202ENST00000590542 RUSC2Q8N2Y8 1516 aa12.75□□□□□ -0.37
NLRP8-202ENST00000590542 CFTRP13569 1480 aa12.74□□□□□ -0.37
NLRP8-202ENST00000590542 DNAJC5BQ9UF47 199 aa12.73□□□□□ -0.37
NLRP8-202ENST00000590542 CADPSQ9ULU8 1353 aa12.7□□□□□ -0.38
NLRP8-202ENST00000590542 CSRNP3Q8WYN3 585 aa12.66□□□□□ -0.38
NLRP8-202ENST00000590542 TOP2BQ02880 1626 aa12.65□□□□□ -0.38
NLRP8-202ENST00000590542 CUX1P39880 1505 aa12.64□□□□□ -0.39
NLRP8-202ENST00000590542 NESP48681 1621 aa12.63□□□□□ -0.39
NLRP8-202ENST00000590542 EEA1Q15075 1411 aa12.61□□□□□ -0.39
NLRP8-202ENST00000590542 BIVM-ERCC5R4GMW8 1640 aa12.6□□□□□ -0.39
NLRP8-202ENST00000590542 PRDM2Q13029 1718 aa12.58□□□□□ -0.4
NLRP8-202ENST00000590542 PCGF6Q9BYE7 350 aa12.58□□□□□ -0.4
NLRP8-202ENST00000590542 UBTFP17480 764 aaKnown RBP12.58□□□□□ -0.4
NLRP8-202ENST00000590542 FANCD2Q9BXW9 1451 aa12.57□□□□□ -0.4
NLRP8-202ENST00000590542 GOLGA3Q08378 1498 aa12.52□□□□□ -0.41
NLRP8-202ENST00000590542 TNIKQ9UKE5 1360 aa12.51□□□□□ -0.41
NLRP8-202ENST00000590542 CEP162Q5TB80 1403 aa12.5□□□□□ -0.41
NLRP8-202ENST00000590542 PPARGC1BQ86YN6 1023 aaKnown RBP12.5□□□□□ -0.41
NLRP8-202ENST00000590542 CEP164Q9UPV0 1460 aa12.49□□□□□ -0.41
NLRP8-202ENST00000590542 RAPGEF2Q9Y4G8 1499 aa12.49□□□□□ -0.41
NLRP8-202ENST00000590542 FGD5Q6ZNL6 1462 aa12.49□□□□□ -0.41
NLRP8-202ENST00000590542 LAMC3Q9Y6N6 1575 aa12.48□□□□□ -0.41
NLRP8-202ENST00000590542 KIF21BO75037 1637 aa12.47□□□□□ -0.41
NLRP8-202ENST00000590542 KIF27Q86VH2 1401 aa12.47□□□□□ -0.41
NLRP8-202ENST00000590542 RANGAP1P46060 587 aaPredicted RBP12.46□□□□□ -0.41
NLRP8-202ENST00000590542 CUX2O14529 1486 aa12.45□□□□□ -0.42
NLRP8-202ENST00000590542 TOPBP1Q92547 1522 aa12.44□□□□□ -0.42
NLRP8-202ENST00000590542 TRIM26Q12899 539 aaPredicted RBP12.43□□□□□ -0.42
NLRP8-202ENST00000590542 RAD54L2Q9Y4B4 1467 aa12.43□□□□□ -0.42
NLRP8-202ENST00000590542 DNMBPQ6XZF7 1577 aa12.42□□□□□ -0.42
NLRP8-202ENST00000590542 PDS5BQ9NTI5 1447 aa12.42□□□□□ -0.42
NLRP8-202ENST00000590542 PRXQ9BXM0 1461 aa12.42□□□□□ -0.42
NLRP8-202ENST00000590542 HRCP23327 699 aa12.41□□□□□ -0.42
NLRP8-202ENST00000590542 URB2Q14146 1524 aaKnown RBP12.41□□□□□ -0.42
NLRP8-202ENST00000590542 POLA1P09884 1462 aaPredicted RBP12.4□□□□□ -0.42
NLRP8-202ENST00000590542 TTBK1Q5TCY1 1321 aaPredicted RBP12.39□□□□□ -0.43
NLRP8-202ENST00000590542 KIF21AQ7Z4S6 1674 aa12.39□□□□□ -0.43
NLRP8-202ENST00000590542 IGF1RP08069 1367 aa12.38□□□□□ -0.43
NLRP8-202ENST00000590542 CLIP1P30622 1438 aa12.37□□□□□ -0.43
NLRP8-202ENST00000590542 ERICH3Q5RHP9 1530 aa12.35□□□□□ -0.43
NLRP8-202ENST00000590542 ABCA10Q8WWZ4 1543 aa12.32□□□□□ -0.44
NLRP8-202ENST00000590542 CARMIL1Q5VZK9 1371 aa12.32□□□□□ -0.44
NLRP8-202ENST00000590542 TDRD9Q8NDG6 1382 aaKnown RBP12.31□□□□□ -0.44
NLRP8-202ENST00000590542 PELP1Q8IZL8 1130 aaKnown RBP12.29□□□□□ -0.44
NLRP8-202ENST00000590542 MRC2Q9UBG0 1479 aa12.26□□□□□ -0.45
NLRP8-202ENST00000590542 VPS8Q8N3P4 1428 aa12.25□□□□□ -0.45
NLRP8-202ENST00000590542 WDR97A6NE52 1622 aa12.24□□□□□ -0.45
NLRP8-202ENST00000590542 ARAP1Q96P48 1450 aa12.23□□□□□ -0.45
NLRP8-202ENST00000590542 ERCC6Q03468 1493 aa12.22□□□□□ -0.45
NLRP8-202ENST00000590542 GAPVD1Q14C86 1478 aa12.22□□□□□ -0.45
NLRP8-202ENST00000590542 TARBP1Q13395 1621 aaKnown RBP12.21□□□□□ -0.45
NLRP8-202ENST00000590542 ABCA5Q8WWZ7 1642 aa12.2□□□□□ -0.46
NLRP8-202ENST00000590542 ARHGAP35Q9NRY4 1499 aa12.2□□□□□ -0.46
NLRP8-202ENST00000590542 AQRO60306 1485 aaKnown RBP eCLIP12.19□□□□□ -0.46
NLRP8-202ENST00000590542 APLP2Q06481 763 aa12.17□□□□□ -0.46
NLRP8-202ENST00000590542 P3H3Q8IVL6 736 aa12.17□□□□□ -0.46
NLRP8-202ENST00000590542 WDR62O43379 1518 aa12.16□□□□□ -0.46
NLRP8-202ENST00000590542 CUL7Q14999 1698 aa12.16□□□□□ -0.46
NLRP8-202ENST00000590542 ZNF608Q9ULD9 1512 aaPredicted RBP12.16□□□□□ -0.46
NLRP8-202ENST00000590542 KANK4Q5T7N3 995 aaPredicted RBP12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms