RNA–Protein interactions for RNA: ENST00000590459.1

VASP-209, Transcript of vasodilator stimulated phosphoprotein, humanhuman

TSL 2

Gene VASP, Length 405 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VASP-209ENST00000590459 NISCHQ9Y2I1 1504 aa23.31■■□□□ 1.32
VASP-209ENST00000590459 AEBP2Q6ZN18 517 aaPredicted RBP22.19■■□□□ 1.14
VASP-209ENST00000590459 ABCC9O60706 1549 aa21.65■■□□□ 1.06
VASP-209ENST00000590459 CHIC1Q5VXU3 224 aa21.51■■□□□ 1.03
VASP-209ENST00000590459 DNAJC5BQ9UF47 199 aa20.99■□□□□ 0.95
VASP-209ENST00000590459 CCDC180Q9P1Z9 1646 aa20.78■□□□□ 0.92
VASP-209ENST00000590459 RB1CC1Q8TDY2 1594 aa20.25■□□□□ 0.83
VASP-209ENST00000590459 PABPN1Q86U42 306 aaKnown RBP eCLIP20.08■□□□□ 0.81
VASP-209ENST00000590459 DNAJC5Q9H3Z4 198 aa19.93■□□□□ 0.78
VASP-209ENST00000590459 NACADO15069 1562 aa19.91■□□□□ 0.78
VASP-209ENST00000590459 DCAF8L2P0C7V8 631 aa19.8■□□□□ 0.76
VASP-209ENST00000590459 CECR2Q9BXF3 1484 aa19.6■□□□□ 0.73
VASP-209ENST00000590459 BICRAQ9NZM4 1560 aa19.59■□□□□ 0.73
VASP-209ENST00000590459 UNC13AQ9UPW8 1703 aa19.59■□□□□ 0.73
VASP-209ENST00000590459 ZCCHC6Q5VYS8 1495 aaKnown RBP19.57■□□□□ 0.72
VASP-209ENST00000590459 CC2D2AQ9P2K1 1620 aa19.46■□□□□ 0.71
VASP-209ENST00000590459 DCAF1Q9Y4B6 1507 aa19.37■□□□□ 0.69
VASP-209ENST00000590459 MYO15BQ96JP2 1530 aa19.35■□□□□ 0.69
VASP-209ENST00000590459 SHROOM4Q9ULL8 1493 aa19.35■□□□□ 0.69
VASP-209ENST00000590459 EIF4G1Q04637 1599 aaKnown RBP19.23■□□□□ 0.67
VASP-209ENST00000590459 CUX2O14529 1486 aa19■□□□□ 0.63
VASP-209ENST00000590459 SCRIBQ14160 1630 aa18.93■□□□□ 0.62
VASP-209ENST00000590459 PHF23Q9BUL5 403 aaPredicted RBP18.92■□□□□ 0.62
VASP-209ENST00000590459 ERCC6Q03468 1493 aa18.83■□□□□ 0.6
VASP-209ENST00000590459 SENP3Q9H4L4 574 aaPredicted RBP18.81■□□□□ 0.6
VASP-209ENST00000590459 TRIM41Q8WV44 630 aa18.79■□□□□ 0.6
VASP-209ENST00000590459 NCAPD3P42695 1498 aa18.4■□□□□ 0.54
VASP-209ENST00000590459 NESP48681 1621 aa18.33■□□□□ 0.52
VASP-209ENST00000590459 THOC2Q8NI27 1593 aaKnown RBP18.25■□□□□ 0.51
VASP-209ENST00000590459 ATAD2BQ9ULI0 1458 aa18.22■□□□□ 0.51
VASP-209ENST00000590459 SMARCA2P51531 1590 aa18.17■□□□□ 0.5
VASP-209ENST00000590459 SUPT5HO00267 1087 aaKnown RBP18.17■□□□□ 0.5
VASP-209ENST00000590459 HMGXB3Q12766 1538 aa18.16■□□□□ 0.5
VASP-209ENST00000590459 PDS5BQ9NTI5 1447 aa18.1■□□□□ 0.49
VASP-209ENST00000590459 LAMC3Q9Y6N6 1575 aa18.09■□□□□ 0.49
VASP-209ENST00000590459 OSCARQ8IYS5 282 aa18.08■□□□□ 0.48
VASP-209ENST00000590459 RSF1Q96T23 1441 aaPredicted RBP18.06■□□□□ 0.48
VASP-209ENST00000590459 BAZ1BQ9UIG0 1483 aaKnown RBP18.04■□□□□ 0.48
VASP-209ENST00000590459 BAZ1AQ9NRL2 1556 aaPredicted RBP18.02■□□□□ 0.48
VASP-209ENST00000590459 KIF21AQ7Z4S6 1674 aa17.99■□□□□ 0.47
VASP-209ENST00000590459 MROH2BQ7Z745 1585 aa17.96■□□□□ 0.46
VASP-209ENST00000590459 SMARCA4P51532 1647 aa17.95■□□□□ 0.46
VASP-209ENST00000590459 MRC2Q9UBG0 1479 aa17.95■□□□□ 0.46
VASP-209ENST00000590459 WDR62O43379 1518 aa17.88■□□□□ 0.45
VASP-209ENST00000590459 CADPSQ9ULU8 1353 aa17.84■□□□□ 0.45
VASP-209ENST00000590459 TRHP20396 242 aaPredicted RBP17.82■□□□□ 0.44
VASP-209ENST00000590459 WIZO95785 1651 aa17.79■□□□□ 0.44
VASP-209ENST00000590459 RIMBP3CA6NJZ7 1639 aa17.79■□□□□ 0.44
VASP-209ENST00000590459 RIMBP3BA6NNM3 1639 aa17.79■□□□□ 0.44
VASP-209ENST00000590459 RIMBP3Q9UFD9 1639 aa17.79■□□□□ 0.44
VASP-209ENST00000590459 PEG3Q9GZU2 1588 aa17.77■□□□□ 0.44
VASP-209ENST00000590459 CEP164Q9UPV0 1460 aa17.72■□□□□ 0.43
VASP-209ENST00000590459 CYB5RLQ6IPT4 315 aa17.71■□□□□ 0.43
VASP-209ENST00000590459 ARHGEF11O15085 1522 aa17.69■□□□□ 0.42
VASP-209ENST00000590459 TOP2AP11388 1531 aaKnown RBP17.67■□□□□ 0.42
VASP-209ENST00000590459 FANCD2Q9BXW9 1451 aa17.63■□□□□ 0.41
VASP-209ENST00000590459 FOXD1Q16676 465 aa17.49■□□□□ 0.39
VASP-209ENST00000590459 URB2Q14146 1524 aaKnown RBP17.47■□□□□ 0.39
VASP-209ENST00000590459 CCDC88BA6NC98 1476 aa17.47■□□□□ 0.39
VASP-209ENST00000590459 ARAP1Q96P48 1450 aa17.45■□□□□ 0.38
VASP-209ENST00000590459 CFTRP13569 1480 aa17.43■□□□□ 0.38
VASP-209ENST00000590459 IFT140Q96RY7 1462 aa17.4■□□□□ 0.38
VASP-209ENST00000590459 ZNF608Q9ULD9 1512 aaPredicted RBP17.4■□□□□ 0.38
VASP-209ENST00000590459 PLPPR3Q6T4P5 718 aa17.38■□□□□ 0.37
VASP-209ENST00000590459 FBLN2P98095 1184 aa17.35■□□□□ 0.37
VASP-209ENST00000590459 EIF4G3O43432 1585 aaKnown RBP17.23■□□□□ 0.35
VASP-209ENST00000590459 CHD1O14646 1710 aa17.21■□□□□ 0.35
VASP-209ENST00000590459 AQRO60306 1485 aaKnown RBP eCLIP17.18■□□□□ 0.342e-11■■■■■ 55.9
VASP-209ENST00000590459 ILDR1Q86SU0 546 aaPredicted RBP17.18■□□□□ 0.34
VASP-209ENST00000590459 TOPBP1Q92547 1522 aa17.16■□□□□ 0.34
VASP-209ENST00000590459 ABCC8Q09428 1581 aa17.14■□□□□ 0.33
VASP-209ENST00000590459 CHMP7Q8WUX9 453 aaPredicted RBP17.07■□□□□ 0.32
VASP-209ENST00000590459 CLASP1Q7Z460 1538 aa17.04■□□□□ 0.32
VASP-209ENST00000590459 PRDM2Q13029 1718 aa17.04■□□□□ 0.32
VASP-209ENST00000590459 SYNJ1O43426 1573 aa17.02■□□□□ 0.32
VASP-209ENST00000590459 DNMBPQ6XZF7 1577 aa17.02■□□□□ 0.32
VASP-209ENST00000590459 TARBP1Q13395 1621 aaKnown RBP17.02■□□□□ 0.31
VASP-209ENST00000590459 GAPVD1Q14C86 1478 aa17■□□□□ 0.31
VASP-209ENST00000590459 WRNQ14191 1432 aaPredicted RBP eCLIP17■□□□□ 0.31
VASP-209ENST00000590459 TDRD9Q8NDG6 1382 aaKnown RBP16.98■□□□□ 0.31
VASP-209ENST00000590459 SNAPC4Q5SXM2 1469 aa16.98■□□□□ 0.31
VASP-209ENST00000590459 POLA1P09884 1462 aaPredicted RBP16.94■□□□□ 0.3
VASP-209ENST00000590459 SOGA1O94964 1423 aa16.91■□□□□ 0.3
VASP-209ENST00000590459 MAGI1Q96QZ7 1491 aaPredicted RBP16.91■□□□□ 0.3
VASP-209ENST00000590459 RAD54L2Q9Y4B4 1467 aa16.9■□□□□ 0.3
VASP-209ENST00000590459 TOP2BQ02880 1626 aa16.88■□□□□ 0.29
VASP-209ENST00000590459 BIVM-ERCC5R4GMW8 1640 aa16.87■□□□□ 0.29
VASP-209ENST00000590459 SYNJ2O15056 1496 aa16.86■□□□□ 0.29
VASP-209ENST00000590459 GRIN2BQ13224 1484 aa16.85■□□□□ 0.29
VASP-209ENST00000590459 KDM4FA0A1W2PPD8 638 aa16.84■□□□□ 0.29
VASP-209ENST00000590459 EEA1Q15075 1411 aa16.84■□□□□ 0.29
VASP-209ENST00000590459 WDR97A6NE52 1622 aa16.84■□□□□ 0.29
VASP-209ENST00000590459 CUX1P39880 1505 aa16.79■□□□□ 0.28
VASP-209ENST00000590459 FAM9AQ8IZU1 332 aaPredicted RBP16.74■□□□□ 0.27
VASP-209ENST00000590459 PPP6R1Q9UPN7 881 aa16.74■□□□□ 0.27
VASP-209ENST00000590459 FGD5Q6ZNL6 1462 aa16.73■□□□□ 0.27
VASP-209ENST00000590459 LOC105371045A0A1W2PR82 267 aa16.73■□□□□ 0.27
VASP-209ENST00000590459 FAM69CQ0P6D2 419 aa16.73■□□□□ 0.27
VASP-209ENST00000590459 ADRA2BP18089 450 aa16.71■□□□□ 0.27
VASP-209ENST00000590459 ERCC6L2Q5T890 1561 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms