RNA–Protein interactions for RNA: ENST00000589742.5

RFX2-215, Transcript of regulatory factor X2, humanhuman

TSL 4

Gene RFX2, Length 565 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX2-215ENST00000589742 NISCHQ9Y2I1 1504 aa28.62■■■□□ 2.17
RFX2-215ENST00000589742 CCDC180Q9P1Z9 1646 aa25.28■■□□□ 1.64
RFX2-215ENST00000589742 ABCC9O60706 1549 aa24.8■■□□□ 1.56
RFX2-215ENST00000589742 DCAF8L2P0C7V8 631 aa24.05■■□□□ 1.44
RFX2-215ENST00000589742 ZCCHC6Q5VYS8 1495 aaKnown RBP23.84■■□□□ 1.41
RFX2-215ENST00000589742 NACADO15069 1562 aa23.79■■□□□ 1.4
RFX2-215ENST00000589742 RB1CC1Q8TDY2 1594 aa23.79■■□□□ 1.4
RFX2-215ENST00000589742 MYO15BQ96JP2 1530 aa23.64■■□□□ 1.38
RFX2-215ENST00000589742 DCAF1Q9Y4B6 1507 aa23.61■■□□□ 1.37
RFX2-215ENST00000589742 PABPN1Q86U42 306 aaKnown RBP eCLIP23.28■■□□□ 1.32
RFX2-215ENST00000589742 UNC13AQ9UPW8 1703 aa23.25■■□□□ 1.31
RFX2-215ENST00000589742 SCRIBQ14160 1630 aa23.2■■□□□ 1.3
RFX2-215ENST00000589742 BICRAQ9NZM4 1560 aa23.1■■□□□ 1.29
RFX2-215ENST00000589742 SHROOM4Q9ULL8 1493 aa22.84■■□□□ 1.25
RFX2-215ENST00000589742 DNAJC5BQ9UF47 199 aa22.73■■□□□ 1.23
RFX2-215ENST00000589742 EIF4G1Q04637 1599 aaKnown RBP22.47■■□□□ 1.19
RFX2-215ENST00000589742 CC2D2AQ9P2K1 1620 aa22.37■■□□□ 1.17
RFX2-215ENST00000589742 CECR2Q9BXF3 1484 aa22.35■■□□□ 1.17
RFX2-215ENST00000589742 SMARCA4P51532 1647 aa22.16■■□□□ 1.14
RFX2-215ENST00000589742 BAZ1AQ9NRL2 1556 aaPredicted RBP22.13■■□□□ 1.13
RFX2-215ENST00000589742 MROH2BQ7Z745 1585 aa22.1■■□□□ 1.13
RFX2-215ENST00000589742 ATAD2BQ9ULI0 1458 aa22.05■■□□□ 1.12
RFX2-215ENST00000589742 NCAPD3P42695 1498 aa21.99■■□□□ 1.11
RFX2-215ENST00000589742 SMARCA2P51531 1590 aa21.97■■□□□ 1.11
RFX2-215ENST00000589742 RSF1Q96T23 1441 aaPredicted RBP21.89■■□□□ 1.1
RFX2-215ENST00000589742 PEG3Q9GZU2 1588 aa21.89■■□□□ 1.09
RFX2-215ENST00000589742 WIZO95785 1651 aa21.86■■□□□ 1.09
RFX2-215ENST00000589742 BAZ1BQ9UIG0 1483 aaKnown RBP21.85■■□□□ 1.09
RFX2-215ENST00000589742 HMGXB3Q12766 1538 aa21.84■■□□□ 1.09
RFX2-215ENST00000589742 TOP2AP11388 1531 aaKnown RBP21.59■■□□□ 1.05
RFX2-215ENST00000589742 SUPT5HO00267 1087 aaKnown RBP21.57■■□□□ 1.04
RFX2-215ENST00000589742 NESP48681 1621 aa21.5■■□□□ 1.03
RFX2-215ENST00000589742 CCDC88BA6NC98 1476 aa21.4■■□□□ 1.02
RFX2-215ENST00000589742 CADPSQ9ULU8 1353 aa21.39■■□□□ 1.02
RFX2-215ENST00000589742 LAMC3Q9Y6N6 1575 aa21.35■■□□□ 1.01
RFX2-215ENST00000589742 ERCC6Q03468 1493 aa21.33■■□□□ 1.01
RFX2-215ENST00000589742 CFTRP13569 1480 aa21.26■□□□□ 0.99
RFX2-215ENST00000589742 PDS5BQ9NTI5 1447 aa21.25■□□□□ 0.99
RFX2-215ENST00000589742 KIF21AQ7Z4S6 1674 aa21.16■□□□□ 0.98
RFX2-215ENST00000589742 FANCD2Q9BXW9 1451 aa21.13■□□□□ 0.97
RFX2-215ENST00000589742 CEP164Q9UPV0 1460 aa21.07■□□□□ 0.96
RFX2-215ENST00000589742 THOC2Q8NI27 1593 aaKnown RBP21.04■□□□□ 0.96
RFX2-215ENST00000589742 MRC2Q9UBG0 1479 aa21.01■□□□□ 0.95
RFX2-215ENST00000589742 PRDM2Q13029 1718 aa21.01■□□□□ 0.95
RFX2-215ENST00000589742 CUX2O14529 1486 aa21■□□□□ 0.95
RFX2-215ENST00000589742 URB2Q14146 1524 aaKnown RBP20.93■□□□□ 0.94
RFX2-215ENST00000589742 WDR62O43379 1518 aa20.92■□□□□ 0.94
RFX2-215ENST00000589742 TOPBP1Q92547 1522 aa20.81■□□□□ 0.92
RFX2-215ENST00000589742 ABCC8Q09428 1581 aa20.76■□□□□ 0.91
RFX2-215ENST00000589742 DNMBPQ6XZF7 1577 aa20.76■□□□□ 0.91
RFX2-215ENST00000589742 CUX1P39880 1505 aa20.71■□□□□ 0.91
RFX2-215ENST00000589742 POLA1P09884 1462 aaPredicted RBP20.64■□□□□ 0.89
RFX2-215ENST00000589742 IFT140Q96RY7 1462 aa20.63■□□□□ 0.89
RFX2-215ENST00000589742 WRNQ14191 1432 aaPredicted RBP eCLIP20.63■□□□□ 0.89
RFX2-215ENST00000589742 FGD5Q6ZNL6 1462 aa20.62■□□□□ 0.89
RFX2-215ENST00000589742 RAD54L2Q9Y4B4 1467 aa20.62■□□□□ 0.89
RFX2-215ENST00000589742 SOGA1O94964 1423 aa20.61■□□□□ 0.89
RFX2-215ENST00000589742 ZNF608Q9ULD9 1512 aaPredicted RBP20.58■□□□□ 0.89
RFX2-215ENST00000589742 SYNJ1O43426 1573 aa20.55■□□□□ 0.88
RFX2-215ENST00000589742 TARBP1Q13395 1621 aaKnown RBP20.53■□□□□ 0.88
RFX2-215ENST00000589742 TOP2BQ02880 1626 aa20.52■□□□□ 0.88
RFX2-215ENST00000589742 AQRO60306 1485 aaKnown RBP eCLIP20.5■□□□□ 0.87
RFX2-215ENST00000589742 TDRD9Q8NDG6 1382 aaKnown RBP20.5■□□□□ 0.87
RFX2-215ENST00000589742 BIVM-ERCC5R4GMW8 1640 aa20.49■□□□□ 0.87
RFX2-215ENST00000589742 EIF4G3O43432 1585 aaKnown RBP20.42■□□□□ 0.86
RFX2-215ENST00000589742 ABCA10Q8WWZ4 1543 aa20.4■□□□□ 0.86
RFX2-215ENST00000589742 WDR97A6NE52 1622 aa20.36■□□□□ 0.85
RFX2-215ENST00000589742 GAPVD1Q14C86 1478 aa20.33■□□□□ 0.85
RFX2-215ENST00000589742 TRIM41Q8WV44 630 aa20.31■□□□□ 0.84
RFX2-215ENST00000589742 DNAJC5Q9H3Z4 198 aa20.31■□□□□ 0.84
RFX2-215ENST00000589742 GRIN2BQ13224 1484 aa20.3■□□□□ 0.84
RFX2-215ENST00000589742 FBLN2P98095 1184 aa20.29■□□□□ 0.84
RFX2-215ENST00000589742 ABCA5Q8WWZ7 1642 aa20.27■□□□□ 0.84
RFX2-215ENST00000589742 SNAPC4Q5SXM2 1469 aa20.27■□□□□ 0.84
RFX2-215ENST00000589742 OSCARQ8IYS5 282 aa20.25■□□□□ 0.83
RFX2-215ENST00000589742 PBRM1Q86U86 1689 aa20.22■□□□□ 0.83
RFX2-215ENST00000589742 CHMP7Q8WUX9 453 aaPredicted RBP20.21■□□□□ 0.83
RFX2-215ENST00000589742 MAGI1Q96QZ7 1491 aaPredicted RBP20.2■□□□□ 0.82
RFX2-215ENST00000589742 KIF27Q86VH2 1401 aa20.18■□□□□ 0.82
RFX2-215ENST00000589742 CHIC1Q5VXU3 224 aa20.17■□□□□ 0.82
RFX2-215ENST00000589742 CHD1O14646 1710 aa20.15■□□□□ 0.82
RFX2-215ENST00000589742 SYNJ2O15056 1496 aa20.14■□□□□ 0.81
RFX2-215ENST00000589742 IGF1RP08069 1367 aa20.13■□□□□ 0.81
RFX2-215ENST00000589742 ERICH3Q5RHP9 1530 aa20.12■□□□□ 0.81
RFX2-215ENST00000589742 RUSC2Q8N2Y8 1516 aa20.12■□□□□ 0.81
RFX2-215ENST00000589742 FHAD1B1AJZ9 1412 aa20.1■□□□□ 0.81
RFX2-215ENST00000589742 ADAMTS12P58397 1594 aa20.08■□□□□ 0.8
RFX2-215ENST00000589742 GRIN2AQ12879 1464 aa20.03■□□□□ 0.8
RFX2-215ENST00000589742 CARMIL1Q5VZK9 1371 aa20.01■□□□□ 0.79
RFX2-215ENST00000589742 FAM9AQ8IZU1 332 aaPredicted RBP19.96■□□□□ 0.79
RFX2-215ENST00000589742 CUL7Q14999 1698 aa19.94■□□□□ 0.78
RFX2-215ENST00000589742 NUP160Q12769 1436 aa19.93■□□□□ 0.78
RFX2-215ENST00000589742 CLASP1Q7Z460 1538 aa19.93■□□□□ 0.78
RFX2-215ENST00000589742 CEP170Q5SW79 1584 aa19.93■□□□□ 0.78
RFX2-215ENST00000589742 CSRNP3Q8WYN3 585 aa19.91■□□□□ 0.78
RFX2-215ENST00000589742 RAPGEF2Q9Y4G8 1499 aa19.86■□□□□ 0.77
RFX2-215ENST00000589742 ARHGEF11O15085 1522 aa19.86■□□□□ 0.77
RFX2-215ENST00000589742 RIMBP3CA6NJZ7 1639 aa19.84■□□□□ 0.77
RFX2-215ENST00000589742 RIMBP3BA6NNM3 1639 aa19.84■□□□□ 0.77
RFX2-215ENST00000589742 RIMBP3Q9UFD9 1639 aa19.84■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms