RNA–Protein interactions for RNA: ENST00000589712.1

RFX2-214, Transcript of regulatory factor X2, humanhuman

TSL 3

Gene RFX2, Length 659 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX2-214ENST00000589712 NISCHQ9Y2I1 1504 aa30.46■■■□□ 2.47
RFX2-214ENST00000589712 ABCC9O60706 1549 aa30.06■■■□□ 2.4
RFX2-214ENST00000589712 DNAJC5BQ9UF47 199 aa29.76■■■□□ 2.35
RFX2-214ENST00000589712 DNAJC5Q9H3Z4 198 aa28.68■■■□□ 2.18
RFX2-214ENST00000589712 CCDC180Q9P1Z9 1646 aa28.2■■■□□ 2.1
RFX2-214ENST00000589712 RB1CC1Q8TDY2 1594 aa27.75■■■□□ 2.03
RFX2-214ENST00000589712 PABPN1Q86U42 306 aaKnown RBP eCLIP27.66■■■□□ 2.02
RFX2-214ENST00000589712 CECR2Q9BXF3 1484 aa27.25■■□□□ 1.95
RFX2-214ENST00000589712 UNC13AQ9UPW8 1703 aa27.19■■□□□ 1.94
RFX2-214ENST00000589712 NACADO15069 1562 aa27.05■■□□□ 1.92
RFX2-214ENST00000589712 CC2D2AQ9P2K1 1620 aa27.05■■□□□ 1.92
RFX2-214ENST00000589712 BICRAQ9NZM4 1560 aa26.99■■□□□ 1.91
RFX2-214ENST00000589712 TRIM41Q8WV44 630 aa26.79■■□□□ 1.88
RFX2-214ENST00000589712 CUX2O14529 1486 aa26.62■■□□□ 1.85
RFX2-214ENST00000589712 DCAF8L2P0C7V8 631 aa26.6■■□□□ 1.85
RFX2-214ENST00000589712 EIF4G1Q04637 1599 aaKnown RBP26.51■■□□□ 1.83
RFX2-214ENST00000589712 SHROOM4Q9ULL8 1493 aa26.38■■□□□ 1.81
RFX2-214ENST00000589712 ERCC6Q03468 1493 aa26.12■■□□□ 1.77
RFX2-214ENST00000589712 MYO15BQ96JP2 1530 aa25.98■■□□□ 1.75
RFX2-214ENST00000589712 AEBP2Q6ZN18 517 aaPredicted RBP25.71■■□□□ 1.71
RFX2-214ENST00000589712 SCRIBQ14160 1630 aa25.66■■□□□ 1.7
RFX2-214ENST00000589712 THOC2Q8NI27 1593 aaKnown RBP25.41■■□□□ 1.66
RFX2-214ENST00000589712 NESP48681 1621 aa25.28■■□□□ 1.64
RFX2-214ENST00000589712 SMARCA2P51531 1590 aa25.15■■□□□ 1.62
RFX2-214ENST00000589712 BAZ1AQ9NRL2 1556 aaPredicted RBP25.15■■□□□ 1.62
RFX2-214ENST00000589712 OSCARQ8IYS5 282 aa25.05■■□□□ 1.6
RFX2-214ENST00000589712 RIMBP3CA6NJZ7 1639 aa25.04■■□□□ 1.6
RFX2-214ENST00000589712 RIMBP3BA6NNM3 1639 aa25.04■■□□□ 1.6
RFX2-214ENST00000589712 RIMBP3Q9UFD9 1639 aa25.04■■□□□ 1.6
RFX2-214ENST00000589712 TRHP20396 242 aaPredicted RBP25.04■■□□□ 1.6
RFX2-214ENST00000589712 DCAF1Q9Y4B6 1507 aa24.98■■□□□ 1.59
RFX2-214ENST00000589712 NCAPD3P42695 1498 aa24.96■■□□□ 1.59
RFX2-214ENST00000589712 ILDR1Q86SU0 546 aaPredicted RBP24.95■■□□□ 1.58
RFX2-214ENST00000589712 KIF21AQ7Z4S6 1674 aa24.94■■□□□ 1.58
RFX2-214ENST00000589712 ZCCHC6Q5VYS8 1495 aaKnown RBP24.86■■□□□ 1.57
RFX2-214ENST00000589712 LAMC3Q9Y6N6 1575 aa24.76■■□□□ 1.55
RFX2-214ENST00000589712 ARHGEF11O15085 1522 aa24.74■■□□□ 1.55
RFX2-214ENST00000589712 PDS5BQ9NTI5 1447 aa24.67■■□□□ 1.54
RFX2-214ENST00000589712 HMGXB3Q12766 1538 aa24.66■■□□□ 1.54
RFX2-214ENST00000589712 ATAD2BQ9ULI0 1458 aa24.66■■□□□ 1.54
RFX2-214ENST00000589712 CYB5RLQ6IPT4 315 aa24.65■■□□□ 1.54
RFX2-214ENST00000589712 MRC2Q9UBG0 1479 aa24.6■■□□□ 1.53
RFX2-214ENST00000589712 WDR62O43379 1518 aa24.6■■□□□ 1.53
RFX2-214ENST00000589712 BAZ1BQ9UIG0 1483 aaKnown RBP24.38■■□□□ 1.49
RFX2-214ENST00000589712 ARAP1Q96P48 1450 aa24.37■■□□□ 1.49
RFX2-214ENST00000589712 SMARCA4P51532 1647 aa24.22■■□□□ 1.47
RFX2-214ENST00000589712 CEP164Q9UPV0 1460 aa24.14■■□□□ 1.46
RFX2-214ENST00000589712 CADPSQ9ULU8 1353 aa24.13■■□□□ 1.45
RFX2-214ENST00000589712 RSF1Q96T23 1441 aaPredicted RBP23.95■■□□□ 1.42
RFX2-214ENST00000589712 FANCD2Q9BXW9 1451 aa23.93■■□□□ 1.42
RFX2-214ENST00000589712 PEG3Q9GZU2 1588 aa23.92■■□□□ 1.42
RFX2-214ENST00000589712 CHD1O14646 1710 aa23.91■■□□□ 1.42
RFX2-214ENST00000589712 ZNF608Q9ULD9 1512 aaPredicted RBP23.88■■□□□ 1.41
RFX2-214ENST00000589712 URB2Q14146 1524 aaKnown RBP23.85■■□□□ 1.41
RFX2-214ENST00000589712 KDM4FA0A1W2PPD8 638 aa23.71■■□□□ 1.39
RFX2-214ENST00000589712 EIF4G3O43432 1585 aaKnown RBP23.69■■□□□ 1.38
RFX2-214ENST00000589712 IFT140Q96RY7 1462 aa23.69■■□□□ 1.38
RFX2-214ENST00000589712 FBLN2P98095 1184 aa23.68■■□□□ 1.38
RFX2-214ENST00000589712 LMTK3Q96Q04 1460 aa23.64■■□□□ 1.38
RFX2-214ENST00000589712 ERCC6L2Q5T890 1561 aa23.61■■□□□ 1.37
RFX2-214ENST00000589712 FBXO41Q8TF61 875 aa23.58■■□□□ 1.37
RFX2-214ENST00000589712 CLASP1Q7Z460 1538 aa23.49■■□□□ 1.35
RFX2-214ENST00000589712 MROH2BQ7Z745 1585 aa23.48■■□□□ 1.35
RFX2-214ENST00000589712 HECW2Q9P2P5 1572 aa23.48■■□□□ 1.35
RFX2-214ENST00000589712 CFTRP13569 1480 aa23.46■■□□□ 1.35
RFX2-214ENST00000589712 SOCS7O14512 581 aa23.45■■□□□ 1.34
RFX2-214ENST00000589712 KIF13AQ9H1H9 1805 aa23.43■■□□□ 1.34
RFX2-214ENST00000589712 GAPVD1Q14C86 1478 aa23.42■■□□□ 1.34
RFX2-214ENST00000589712 AQRO60306 1485 aaKnown RBP eCLIP23.4■■□□□ 1.34
RFX2-214ENST00000589712 SYNJ1O43426 1573 aa23.35■■□□□ 1.33
RFX2-214ENST00000589712 ILDR2Q71H61 639 aa23.28■■□□□ 1.32
RFX2-214ENST00000589712 TOPBP1Q92547 1522 aa23.26■■□□□ 1.31
RFX2-214ENST00000589712 KDM6BO15054 1643 aa23.23■■□□□ 1.31
RFX2-214ENST00000589712 PRDM2Q13029 1718 aa23.21■■□□□ 1.31
RFX2-214ENST00000589712 TARBP1Q13395 1621 aaKnown RBP23.19■■□□□ 1.3
RFX2-214ENST00000589712 ADGRL1O94910 1474 aa23.17■■□□□ 1.3
RFX2-214ENST00000589712 WIZO95785 1651 aa23.16■■□□□ 1.3
RFX2-214ENST00000589712 SYNJ2O15056 1496 aa23.15■■□□□ 1.3
RFX2-214ENST00000589712 SNAPC4Q5SXM2 1469 aa23.15■■□□□ 1.3
RFX2-214ENST00000589712 CHMP7Q8WUX9 453 aaPredicted RBP23.13■■□□□ 1.29
RFX2-214ENST00000589712 DISP3Q9P2K9 1392 aa23.12■■□□□ 1.29
RFX2-214ENST00000589712 FAM69CQ0P6D2 419 aa23.04■■□□□ 1.28
RFX2-214ENST00000589712 ABCC8Q09428 1581 aa23.02■■□□□ 1.28
RFX2-214ENST00000589712 DNMBPQ6XZF7 1577 aa23.02■■□□□ 1.28
RFX2-214ENST00000589712 TDRD9Q8NDG6 1382 aaKnown RBP22.97■■□□□ 1.27
RFX2-214ENST00000589712 MAGI1Q96QZ7 1491 aaPredicted RBP22.96■■□□□ 1.27
RFX2-214ENST00000589712 ABCC10Q5T3U5 1492 aa22.95■■□□□ 1.26
RFX2-214ENST00000589712 TSPOAP1O95153 1857 aa22.94■■□□□ 1.26
RFX2-214ENST00000589712 DIP2BQ9P265 1576 aa22.9■■□□□ 1.26
RFX2-214ENST00000589712 POLA1P09884 1462 aaPredicted RBP22.9■■□□□ 1.26
RFX2-214ENST00000589712 RAD54L2Q9Y4B4 1467 aa22.87■■□□□ 1.25
RFX2-214ENST00000589712 WDR97A6NE52 1622 aa22.8■■□□□ 1.24
RFX2-214ENST00000589712 CEP170Q5SW79 1584 aa22.78■■□□□ 1.24
RFX2-214ENST00000589712 GRIN2BQ13224 1484 aa22.77■■□□□ 1.24
RFX2-214ENST00000589712 SPATA31D1Q6ZQQ2 1576 aa22.76■■□□□ 1.23
RFX2-214ENST00000589712 SOGA1O94964 1423 aa22.74■■□□□ 1.23
RFX2-214ENST00000589712 MAPKBP1O60336 1514 aa22.73■■□□□ 1.23
RFX2-214ENST00000589712 TOP2AP11388 1531 aaKnown RBP22.7■■□□□ 1.22
RFX2-214ENST00000589712 PBRM1Q86U86 1689 aa22.65■■□□□ 1.22
RFX2-214ENST00000589712 NPM1P06748 294 aaKnown RBP eCLIP22.65■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms