RNA–Protein interactions for RNA: ENST00000589572.5

TNPO2-215, Transcript of transportin 2, humanhuman

TSL 3

Gene TNPO2, Length 586 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNPO2-215ENST00000589572 NISCHQ9Y2I1 1504 aa28.02■■■□□ 2.08
TNPO2-215ENST00000589572 CCDC180Q9P1Z9 1646 aa24.64■■□□□ 1.54
TNPO2-215ENST00000589572 ABCC9O60706 1549 aa23.81■■□□□ 1.4
TNPO2-215ENST00000589572 ZCCHC6Q5VYS8 1495 aaKnown RBP23.44■■□□□ 1.34
TNPO2-215ENST00000589572 DCAF8L2P0C7V8 631 aa23.26■■□□□ 1.31
TNPO2-215ENST00000589572 DCAF1Q9Y4B6 1507 aa23.13■■□□□ 1.29
TNPO2-215ENST00000589572 NACADO15069 1562 aa23.06■■□□□ 1.28
TNPO2-215ENST00000589572 MYO15BQ96JP2 1530 aa23.03■■□□□ 1.28
TNPO2-215ENST00000589572 RB1CC1Q8TDY2 1594 aa23■■□□□ 1.27
TNPO2-215ENST00000589572 SCRIBQ14160 1630 aa22.64■■□□□ 1.21
TNPO2-215ENST00000589572 UNC13AQ9UPW8 1703 aa22.54■■□□□ 1.2
TNPO2-215ENST00000589572 SHROOM4Q9ULL8 1493 aa22.52■■□□□ 1.2
TNPO2-215ENST00000589572 BICRAQ9NZM4 1560 aa22.37■■□□□ 1.17
TNPO2-215ENST00000589572 PABPN1Q86U42 306 aaKnown RBP eCLIP22.34■■□□□ 1.179e-7■□□□□ 8.3
TNPO2-215ENST00000589572 DNAJC5BQ9UF47 199 aa21.89■■□□□ 1.09
TNPO2-215ENST00000589572 CECR2Q9BXF3 1484 aa21.84■■□□□ 1.09
TNPO2-215ENST00000589572 EIF4G1Q04637 1599 aaKnown RBP21.71■■□□□ 1.07
TNPO2-215ENST00000589572 SMARCA4P51532 1647 aa21.65■■□□□ 1.06
TNPO2-215ENST00000589572 MROH2BQ7Z745 1585 aa21.65■■□□□ 1.06
TNPO2-215ENST00000589572 BAZ1AQ9NRL2 1556 aaPredicted RBP21.64■■□□□ 1.05
TNPO2-215ENST00000589572 RSF1Q96T23 1441 aaPredicted RBP21.54■■□□□ 1.04
TNPO2-215ENST00000589572 CC2D2AQ9P2K1 1620 aa21.52■■□□□ 1.04
TNPO2-215ENST00000589572 WIZO95785 1651 aa21.44■■□□□ 1.02
TNPO2-215ENST00000589572 ATAD2BQ9ULI0 1458 aa21.42■■□□□ 1.02
TNPO2-215ENST00000589572 PEG3Q9GZU2 1588 aa21.39■■□□□ 1.01
TNPO2-215ENST00000589572 SUPT5HO00267 1087 aaKnown RBP21.36■■□□□ 1.01
TNPO2-215ENST00000589572 SMARCA2P51531 1590 aa21.36■■□□□ 1.01
TNPO2-215ENST00000589572 NCAPD3P42695 1498 aa21.3■■□□□ 1
TNPO2-215ENST00000589572 BAZ1BQ9UIG0 1483 aaKnown RBP21.26■□□□□ 0.99
TNPO2-215ENST00000589572 HMGXB3Q12766 1538 aa21.24■□□□□ 0.99
TNPO2-215ENST00000589572 TOP2AP11388 1531 aaKnown RBP21.19■□□□□ 0.98
TNPO2-215ENST00000589572 CCDC88BA6NC98 1476 aa20.97■□□□□ 0.95
TNPO2-215ENST00000589572 NESP48681 1621 aa20.75■□□□□ 0.91
TNPO2-215ENST00000589572 CADPSQ9ULU8 1353 aa20.72■□□□□ 0.91
TNPO2-215ENST00000589572 CFTRP13569 1480 aa20.69■□□□□ 0.9
TNPO2-215ENST00000589572 LAMC3Q9Y6N6 1575 aa20.65■□□□□ 0.9
TNPO2-215ENST00000589572 ERCC6Q03468 1493 aa20.58■□□□□ 0.89
TNPO2-215ENST00000589572 PRDM2Q13029 1718 aa20.54■□□□□ 0.88
TNPO2-215ENST00000589572 FANCD2Q9BXW9 1451 aa20.5■□□□□ 0.87
TNPO2-215ENST00000589572 PDS5BQ9NTI5 1447 aa20.49■□□□□ 0.87
TNPO2-215ENST00000589572 KIF21AQ7Z4S6 1674 aa20.48■□□□□ 0.87
TNPO2-215ENST00000589572 CEP164Q9UPV0 1460 aa20.42■□□□□ 0.86
TNPO2-215ENST00000589572 ABCC8Q09428 1581 aa20.38■□□□□ 0.85
TNPO2-215ENST00000589572 URB2Q14146 1524 aaKnown RBP20.31■□□□□ 0.84
TNPO2-215ENST00000589572 MRC2Q9UBG0 1479 aa20.3■□□□□ 0.84
TNPO2-215ENST00000589572 THOC2Q8NI27 1593 aaKnown RBP20.29■□□□□ 0.84
TNPO2-215ENST00000589572 CUX1P39880 1505 aa20.28■□□□□ 0.84
TNPO2-215ENST00000589572 CUX2O14529 1486 aa20.28■□□□□ 0.84
TNPO2-215ENST00000589572 WRNQ14191 1432 aaPredicted RBP eCLIP20.27■□□□□ 0.83
TNPO2-215ENST00000589572 SYNJ1O43426 1573 aa20.25■□□□□ 0.83
TNPO2-215ENST00000589572 TOPBP1Q92547 1522 aa20.23■□□□□ 0.83
TNPO2-215ENST00000589572 DNMBPQ6XZF7 1577 aa20.23■□□□□ 0.83
TNPO2-215ENST00000589572 WDR62O43379 1518 aa20.22■□□□□ 0.83
TNPO2-215ENST00000589572 CHIC1Q5VXU3 224 aa20.2■□□□□ 0.82
TNPO2-215ENST00000589572 TOP2BQ02880 1626 aa20.17■□□□□ 0.82
TNPO2-215ENST00000589572 BIVM-ERCC5R4GMW8 1640 aa20.17■□□□□ 0.82
TNPO2-215ENST00000589572 FGD5Q6ZNL6 1462 aa20.12■□□□□ 0.81
TNPO2-215ENST00000589572 POLA1P09884 1462 aaPredicted RBP20.1■□□□□ 0.81
TNPO2-215ENST00000589572 TRIM41Q8WV44 630 aa20.09■□□□□ 0.81
TNPO2-215ENST00000589572 RAD54L2Q9Y4B4 1467 aa20.05■□□□□ 0.8
TNPO2-215ENST00000589572 SOGA1O94964 1423 aa20■□□□□ 0.79
TNPO2-215ENST00000589572 DNAJC5Q9H3Z4 198 aa19.99■□□□□ 0.79
TNPO2-215ENST00000589572 TARBP1Q13395 1621 aaKnown RBP19.98■□□□□ 0.79
TNPO2-215ENST00000589572 IFT140Q96RY7 1462 aa19.95■□□□□ 0.78
TNPO2-215ENST00000589572 WDR97A6NE52 1622 aa19.92■□□□□ 0.78
TNPO2-215ENST00000589572 ABCA10Q8WWZ4 1543 aa19.92■□□□□ 0.78
TNPO2-215ENST00000589572 ZNF608Q9ULD9 1512 aaPredicted RBP19.92■□□□□ 0.78
TNPO2-215ENST00000589572 TDRD9Q8NDG6 1382 aaKnown RBP19.87■□□□□ 0.77
TNPO2-215ENST00000589572 RUSC2Q8N2Y8 1516 aa19.86■□□□□ 0.77
TNPO2-215ENST00000589572 AQRO60306 1485 aaKnown RBP eCLIP19.85■□□□□ 0.775e-9■■■■□ 19.6
TNPO2-215ENST00000589572 EIF4G3O43432 1585 aaKnown RBP19.82■□□□□ 0.76
TNPO2-215ENST00000589572 ABCA5Q8WWZ7 1642 aa19.81■□□□□ 0.76
TNPO2-215ENST00000589572 KIF27Q86VH2 1401 aa19.77■□□□□ 0.76
TNPO2-215ENST00000589572 GAPVD1Q14C86 1478 aa19.77■□□□□ 0.76
TNPO2-215ENST00000589572 FAM9AQ8IZU1 332 aaPredicted RBP19.76■□□□□ 0.75
TNPO2-215ENST00000589572 PBRM1Q86U86 1689 aa19.71■□□□□ 0.75
TNPO2-215ENST00000589572 GRIN2BQ13224 1484 aa19.7■□□□□ 0.74
TNPO2-215ENST00000589572 IGF1RP08069 1367 aa19.69■□□□□ 0.74
TNPO2-215ENST00000589572 OSCARQ8IYS5 282 aa19.66■□□□□ 0.74
TNPO2-215ENST00000589572 EEA1Q15075 1411 aa19.66■□□□□ 0.74
TNPO2-215ENST00000589572 SNAPC4Q5SXM2 1469 aa19.66■□□□□ 0.74
TNPO2-215ENST00000589572 ERICH3Q5RHP9 1530 aa19.66■□□□□ 0.74
TNPO2-215ENST00000589572 CSRNP3Q8WYN3 585 aa19.62■□□□□ 0.73
TNPO2-215ENST00000589572 ADAMTS12P58397 1594 aa19.6■□□□□ 0.73
TNPO2-215ENST00000589572 MAGI1Q96QZ7 1491 aaPredicted RBP19.58■□□□□ 0.72
TNPO2-215ENST00000589572 CARMIL1Q5VZK9 1371 aa19.57■□□□□ 0.72
TNPO2-215ENST00000589572 CUL7Q14999 1698 aa19.56■□□□□ 0.72
TNPO2-215ENST00000589572 PRXQ9BXM0 1461 aa19.55■□□□□ 0.72
TNPO2-215ENST00000589572 FHAD1B1AJZ9 1412 aa19.55■□□□□ 0.72
TNPO2-215ENST00000589572 FBLN2P98095 1184 aa19.55■□□□□ 0.72
TNPO2-215ENST00000589572 EHMT2Q96KQ7 1210 aa19.52■□□□□ 0.72
TNPO2-215ENST00000589572 SYNJ2O15056 1496 aa19.52■□□□□ 0.72
TNPO2-215ENST00000589572 RAPGEF2Q9Y4G8 1499 aa19.49■□□□□ 0.71
TNPO2-215ENST00000589572 KIF21BO75037 1637 aa19.48■□□□□ 0.71
TNPO2-215ENST00000589572 CHD1O14646 1710 aa19.48■□□□□ 0.71
TNPO2-215ENST00000589572 CHMP7Q8WUX9 453 aaPredicted RBP19.46■□□□□ 0.71
TNPO2-215ENST00000589572 GRIN2AQ12879 1464 aa19.46■□□□□ 0.71
TNPO2-215ENST00000589572 LOC105371045A0A1W2PR82 267 aa19.41■□□□□ 0.7
TNPO2-215ENST00000589572 GOLGA3Q08378 1498 aa19.41■□□□□ 0.7
TNPO2-215ENST00000589572 CEP170Q5SW79 1584 aa19.39■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms