RNA–Protein interactions for RNA: ENST00000589381.5

ERCC1-210, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 5

Gene ERCC1, Length 738 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-210ENST00000589381 NISCHQ9Y2I1 1504 aa44.29■■■■■ 4.68
ERCC1-210ENST00000589381 CCDC180Q9P1Z9 1646 aa39.38■■■■□ 3.89
ERCC1-210ENST00000589381 ABCC9O60706 1549 aa38.28■■■■□ 3.72
ERCC1-210ENST00000589381 DCAF8L2P0C7V8 631 aa36.98■■■■□ 3.51
ERCC1-210ENST00000589381 RB1CC1Q8TDY2 1594 aa36.95■■■■□ 3.51
ERCC1-210ENST00000589381 ZCCHC6Q5VYS8 1495 aaKnown RBP36.94■■■■□ 3.5
ERCC1-210ENST00000589381 NACADO15069 1562 aa36.93■■■■□ 3.5
ERCC1-210ENST00000589381 MYO15BQ96JP2 1530 aa36.74■■■■□ 3.47
ERCC1-210ENST00000589381 DCAF1Q9Y4B6 1507 aa36.66■■■■□ 3.46
ERCC1-210ENST00000589381 UNC13AQ9UPW8 1703 aa36.19■■■■□ 3.38
ERCC1-210ENST00000589381 SCRIBQ14160 1630 aa35.93■■■■□ 3.34
ERCC1-210ENST00000589381 PABPN1Q86U42 306 aaKnown RBP eCLIP35.77■■■■□ 3.32
ERCC1-210ENST00000589381 BICRAQ9NZM4 1560 aa35.76■■■■□ 3.32
ERCC1-210ENST00000589381 SHROOM4Q9ULL8 1493 aa35.42■■■■□ 3.26
ERCC1-210ENST00000589381 DNAJC5BQ9UF47 199 aa34.86■■■■□ 3.17
ERCC1-210ENST00000589381 EIF4G1Q04637 1599 aaKnown RBP34.83■■■■□ 3.17
ERCC1-210ENST00000589381 CC2D2AQ9P2K1 1620 aa34.66■■■■□ 3.14
ERCC1-210ENST00000589381 CECR2Q9BXF3 1484 aa34.46■■■■□ 3.11
ERCC1-210ENST00000589381 SMARCA4P51532 1647 aa34.37■■■■□ 3.09
ERCC1-210ENST00000589381 BAZ1AQ9NRL2 1556 aaPredicted RBP34.36■■■■□ 3.09
ERCC1-210ENST00000589381 MROH2BQ7Z745 1585 aa34.14■■■■□ 3.06
ERCC1-210ENST00000589381 SMARCA2P51531 1590 aa34.11■■■■□ 3.05
ERCC1-210ENST00000589381 ATAD2BQ9ULI0 1458 aa34.07■■■■□ 3.05
ERCC1-210ENST00000589381 NCAPD3P42695 1498 aa34.02■■■■□ 3.04
ERCC1-210ENST00000589381 PEG3Q9GZU2 1588 aa34■■■■□ 3.03
ERCC1-210ENST00000589381 HMGXB3Q12766 1538 aa33.92■■■■□ 3.02
ERCC1-210ENST00000589381 BAZ1BQ9UIG0 1483 aaKnown RBP33.86■■■■□ 3.01
ERCC1-210ENST00000589381 WIZO95785 1651 aa33.84■■■■□ 3.01
ERCC1-210ENST00000589381 RSF1Q96T23 1441 aaPredicted RBP33.8■■■■□ 3
ERCC1-210ENST00000589381 TOP2AP11388 1531 aaKnown RBP33.46■■■□□ 2.95
ERCC1-210ENST00000589381 NESP48681 1621 aa33.17■■■□□ 2.9
ERCC1-210ENST00000589381 LAMC3Q9Y6N6 1575 aa33.16■■■□□ 2.9
ERCC1-210ENST00000589381 SUPT5HO00267 1087 aaKnown RBP33.15■■■□□ 2.9
ERCC1-210ENST00000589381 CADPSQ9ULU8 1353 aa33.06■■■□□ 2.88
ERCC1-210ENST00000589381 CCDC88BA6NC98 1476 aa33.04■■■□□ 2.88
ERCC1-210ENST00000589381 ERCC6Q03468 1493 aa33.03■■■□□ 2.88
ERCC1-210ENST00000589381 PDS5BQ9NTI5 1447 aa32.91■■■□□ 2.86
ERCC1-210ENST00000589381 CFTRP13569 1480 aa32.9■■■□□ 2.86
ERCC1-210ENST00000589381 KIF21AQ7Z4S6 1674 aa32.88■■■□□ 2.85
ERCC1-210ENST00000589381 PRDM2Q13029 1718 aa32.84■■■□□ 2.85
ERCC1-210ENST00000589381 FANCD2Q9BXW9 1451 aa32.7■■■□□ 2.83
ERCC1-210ENST00000589381 CEP164Q9UPV0 1460 aa32.66■■■□□ 2.82
ERCC1-210ENST00000589381 THOC2Q8NI27 1593 aaKnown RBP32.65■■■□□ 2.82
ERCC1-210ENST00000589381 CUX2O14529 1486 aa32.56■■■□□ 2.8
ERCC1-210ENST00000589381 MRC2Q9UBG0 1479 aa32.55■■■□□ 2.8
ERCC1-210ENST00000589381 WDR62O43379 1518 aa32.44■■■□□ 2.78
ERCC1-210ENST00000589381 URB2Q14146 1524 aaKnown RBP32.34■■■□□ 2.77
ERCC1-210ENST00000589381 ABCC8Q09428 1581 aa32.24■■■□□ 2.75
ERCC1-210ENST00000589381 DNMBPQ6XZF7 1577 aa32.21■■■□□ 2.75
ERCC1-210ENST00000589381 TOPBP1Q92547 1522 aa32.2■■■□□ 2.74
ERCC1-210ENST00000589381 CUX1P39880 1505 aa32.02■■■□□ 2.72
ERCC1-210ENST00000589381 IFT140Q96RY7 1462 aa31.95■■■□□ 2.7
ERCC1-210ENST00000589381 POLA1P09884 1462 aaPredicted RBP31.93■■■□□ 2.7
ERCC1-210ENST00000589381 WRNQ14191 1432 aaPredicted RBP eCLIP31.9■■■□□ 2.7
ERCC1-210ENST00000589381 FGD5Q6ZNL6 1462 aa31.9■■■□□ 2.7
ERCC1-210ENST00000589381 BIVM-ERCC5R4GMW8 1640 aa31.85■■■□□ 2.69
ERCC1-210ENST00000589381 TARBP1Q13395 1621 aaKnown RBP31.84■■■□□ 2.69
ERCC1-210ENST00000589381 TOP2BQ02880 1626 aa31.83■■■□□ 2.69
ERCC1-210ENST00000589381 SYNJ1O43426 1573 aa31.82■■■□□ 2.68
ERCC1-210ENST00000589381 SOGA1O94964 1423 aa31.81■■■□□ 2.68
ERCC1-210ENST00000589381 RAD54L2Q9Y4B4 1467 aa31.78■■■□□ 2.68
ERCC1-210ENST00000589381 ZNF608Q9ULD9 1512 aaPredicted RBP31.76■■■□□ 2.68
ERCC1-210ENST00000589381 EIF4G3O43432 1585 aaKnown RBP31.71■■■□□ 2.67
ERCC1-210ENST00000589381 WDR97A6NE52 1622 aa31.67■■■□□ 2.66
ERCC1-210ENST00000589381 AQRO60306 1485 aaKnown RBP eCLIP31.61■■■□□ 2.652e-7■■■■■ 39
ERCC1-210ENST00000589381 TDRD9Q8NDG6 1382 aaKnown RBP31.59■■■□□ 2.65
ERCC1-210ENST00000589381 ABCA10Q8WWZ4 1543 aa31.59■■■□□ 2.65
ERCC1-210ENST00000589381 PBRM1Q86U86 1689 aa31.47■■■□□ 2.63
ERCC1-210ENST00000589381 ABCA5Q8WWZ7 1642 aa31.46■■■□□ 2.63
ERCC1-210ENST00000589381 GAPVD1Q14C86 1478 aa31.46■■■□□ 2.63
ERCC1-210ENST00000589381 GRIN2BQ13224 1484 aa31.42■■■□□ 2.62
ERCC1-210ENST00000589381 SNAPC4Q5SXM2 1469 aa31.34■■■□□ 2.61
ERCC1-210ENST00000589381 CHD1O14646 1710 aa31.33■■■□□ 2.61
ERCC1-210ENST00000589381 MAGI1Q96QZ7 1491 aaPredicted RBP31.33■■■□□ 2.61
ERCC1-210ENST00000589381 TRIM41Q8WV44 630 aa31.31■■■□□ 2.6
ERCC1-210ENST00000589381 DNAJC5Q9H3Z4 198 aa31.29■■■□□ 2.6
ERCC1-210ENST00000589381 FBLN2P98095 1184 aa31.25■■■□□ 2.59
ERCC1-210ENST00000589381 OSCARQ8IYS5 282 aa31.25■■■□□ 2.59
ERCC1-210ENST00000589381 ERICH3Q5RHP9 1530 aa31.24■■■□□ 2.59
ERCC1-210ENST00000589381 KIF27Q86VH2 1401 aa31.24■■■□□ 2.59
ERCC1-210ENST00000589381 SYNJ2O15056 1496 aa31.2■■■□□ 2.58
ERCC1-210ENST00000589381 CHMP7Q8WUX9 453 aaPredicted RBP31.18■■■□□ 2.58
ERCC1-210ENST00000589381 ADAMTS12P58397 1594 aa31.16■■■□□ 2.58
ERCC1-210ENST00000589381 FHAD1B1AJZ9 1412 aa31.09■■■□□ 2.57
ERCC1-210ENST00000589381 CUL7Q14999 1698 aa31.04■■■□□ 2.56
ERCC1-210ENST00000589381 IGF1RP08069 1367 aa31.03■■■□□ 2.56
ERCC1-210ENST00000589381 GRIN2AQ12879 1464 aa31.01■■■□□ 2.56
ERCC1-210ENST00000589381 CHIC1Q5VXU3 224 aa31■■■□□ 2.55
ERCC1-210ENST00000589381 RUSC2Q8N2Y8 1516 aa30.96■■■□□ 2.55
ERCC1-210ENST00000589381 CLASP1Q7Z460 1538 aa30.89■■■□□ 2.54
ERCC1-210ENST00000589381 CARMIL1Q5VZK9 1371 aa30.88■■■□□ 2.53
ERCC1-210ENST00000589381 CEP170Q5SW79 1584 aa30.85■■■□□ 2.53
ERCC1-210ENST00000589381 NUP160Q12769 1436 aa30.84■■■□□ 2.53
ERCC1-210ENST00000589381 EEA1Q15075 1411 aa30.76■■■□□ 2.51
ERCC1-210ENST00000589381 RIMBP3CA6NJZ7 1639 aa30.76■■■□□ 2.51
ERCC1-210ENST00000589381 RIMBP3BA6NNM3 1639 aa30.76■■■□□ 2.51
ERCC1-210ENST00000589381 RIMBP3Q9UFD9 1639 aa30.76■■■□□ 2.51
ERCC1-210ENST00000589381 ARHGEF11O15085 1522 aa30.75■■■□□ 2.51
ERCC1-210ENST00000589381 RAPGEF2Q9Y4G8 1499 aa30.74■■■□□ 2.51
ERCC1-210ENST00000589381 CSRNP3Q8WYN3 585 aa30.67■■■□□ 2.5
Retrieved 100 of 20,778 RNA–protein pairs in 207.4 ms