RNA–Protein interactions for RNA: ENST00000589343.1

PPP6R1-205, Transcript of protein phosphatase 6 regulatory subunit 1, humanhuman

TSL 2

Gene PPP6R1, Length 904 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP6R1-205ENST00000589343 NISCHQ9Y2I1 1504 aa31.42■■■□□ 2.62
PPP6R1-205ENST00000589343 CCDC180Q9P1Z9 1646 aa27.68■■■□□ 2.02
PPP6R1-205ENST00000589343 ABCC9O60706 1549 aa26.65■■□□□ 1.86
PPP6R1-205ENST00000589343 ZCCHC6Q5VYS8 1495 aaKnown RBP26.25■■□□□ 1.79
PPP6R1-205ENST00000589343 DCAF8L2P0C7V8 631 aa26.13■■□□□ 1.77
PPP6R1-205ENST00000589343 DCAF1Q9Y4B6 1507 aa26.05■■□□□ 1.76
PPP6R1-205ENST00000589343 MYO15BQ96JP2 1530 aa26■■□□□ 1.75
PPP6R1-205ENST00000589343 NACADO15069 1562 aa25.98■■□□□ 1.75
PPP6R1-205ENST00000589343 RB1CC1Q8TDY2 1594 aa25.87■■□□□ 1.73
PPP6R1-205ENST00000589343 SCRIBQ14160 1630 aa25.26■■□□□ 1.63
PPP6R1-205ENST00000589343 UNC13AQ9UPW8 1703 aa25.16■■□□□ 1.62
PPP6R1-205ENST00000589343 SHROOM4Q9ULL8 1493 aa25.08■■□□□ 1.6
PPP6R1-205ENST00000589343 PABPN1Q86U42 306 aaKnown RBP eCLIP25.02■■□□□ 1.6
PPP6R1-205ENST00000589343 BICRAQ9NZM4 1560 aa25.01■■□□□ 1.59
PPP6R1-205ENST00000589343 CECR2Q9BXF3 1484 aa24.38■■□□□ 1.49
PPP6R1-205ENST00000589343 EIF4G1Q04637 1599 aaKnown RBP24.33■■□□□ 1.49
PPP6R1-205ENST00000589343 BAZ1AQ9NRL2 1556 aaPredicted RBP24.33■■□□□ 1.48
PPP6R1-205ENST00000589343 SMARCA4P51532 1647 aa24.24■■□□□ 1.47
PPP6R1-205ENST00000589343 MROH2BQ7Z745 1585 aa24.18■■□□□ 1.46
PPP6R1-205ENST00000589343 RSF1Q96T23 1441 aaPredicted RBP24.12■■□□□ 1.45
PPP6R1-205ENST00000589343 CC2D2AQ9P2K1 1620 aa24.11■■□□□ 1.45
PPP6R1-205ENST00000589343 SMARCA2P51531 1590 aa24.04■■□□□ 1.44
PPP6R1-205ENST00000589343 DNAJC5BQ9UF47 199 aa24.04■■□□□ 1.44
PPP6R1-205ENST00000589343 ATAD2BQ9ULI0 1458 aa24.04■■□□□ 1.44
PPP6R1-205ENST00000589343 PEG3Q9GZU2 1588 aa24.02■■□□□ 1.44
PPP6R1-205ENST00000589343 NCAPD3P42695 1498 aa23.99■■□□□ 1.43
PPP6R1-205ENST00000589343 WIZO95785 1651 aa23.92■■□□□ 1.42
PPP6R1-205ENST00000589343 SUPT5HO00267 1087 aaKnown RBP23.9■■□□□ 1.42
PPP6R1-205ENST00000589343 BAZ1BQ9UIG0 1483 aaKnown RBP23.87■■□□□ 1.41
PPP6R1-205ENST00000589343 HMGXB3Q12766 1538 aa23.86■■□□□ 1.41
PPP6R1-205ENST00000589343 TOP2AP11388 1531 aaKnown RBP23.74■■□□□ 1.39
PPP6R1-205ENST00000589343 CCDC88BA6NC98 1476 aa23.48■■□□□ 1.35
PPP6R1-205ENST00000589343 CADPSQ9ULU8 1353 aa23.33■■□□□ 1.33
PPP6R1-205ENST00000589343 CFTRP13569 1480 aa23.25■■□□□ 1.31
PPP6R1-205ENST00000589343 LAMC3Q9Y6N6 1575 aa23.23■■□□□ 1.31
PPP6R1-205ENST00000589343 NESP48681 1621 aa23.17■■□□□ 1.3
PPP6R1-205ENST00000589343 PDS5BQ9NTI5 1447 aa23.13■■□□□ 1.29
PPP6R1-205ENST00000589343 PRDM2Q13029 1718 aa23.02■■□□□ 1.28
PPP6R1-205ENST00000589343 FANCD2Q9BXW9 1451 aa23.01■■□□□ 1.27
PPP6R1-205ENST00000589343 ERCC6Q03468 1493 aa22.98■■□□□ 1.27
PPP6R1-205ENST00000589343 CEP164Q9UPV0 1460 aa22.94■■□□□ 1.26
PPP6R1-205ENST00000589343 KIF21AQ7Z4S6 1674 aa22.87■■□□□ 1.25
PPP6R1-205ENST00000589343 MRC2Q9UBG0 1479 aa22.81■■□□□ 1.24
PPP6R1-205ENST00000589343 ABCC8Q09428 1581 aa22.79■■□□□ 1.24
PPP6R1-205ENST00000589343 WRNQ14191 1432 aaPredicted RBP eCLIP22.74■■□□□ 1.23
PPP6R1-205ENST00000589343 URB2Q14146 1524 aaKnown RBP22.71■■□□□ 1.23
PPP6R1-205ENST00000589343 THOC2Q8NI27 1593 aaKnown RBP22.7■■□□□ 1.22
PPP6R1-205ENST00000589343 DNMBPQ6XZF7 1577 aa22.69■■□□□ 1.22
PPP6R1-205ENST00000589343 WDR62O43379 1518 aa22.69■■□□□ 1.22
PPP6R1-205ENST00000589343 TOPBP1Q92547 1522 aa22.68■■□□□ 1.22
PPP6R1-205ENST00000589343 CUX1P39880 1505 aa22.67■■□□□ 1.22
PPP6R1-205ENST00000589343 TOP2BQ02880 1626 aa22.6■■□□□ 1.21
PPP6R1-205ENST00000589343 CHIC1Q5VXU3 224 aa22.6■■□□□ 1.21
PPP6R1-205ENST00000589343 TRIM41Q8WV44 630 aa22.6■■□□□ 1.21
PPP6R1-205ENST00000589343 SYNJ1O43426 1573 aa22.58■■□□□ 1.2
PPP6R1-205ENST00000589343 BIVM-ERCC5R4GMW8 1640 aa22.57■■□□□ 1.2
PPP6R1-205ENST00000589343 CUX2O14529 1486 aa22.57■■□□□ 1.2
PPP6R1-205ENST00000589343 FGD5Q6ZNL6 1462 aa22.53■■□□□ 1.2
PPP6R1-205ENST00000589343 POLA1P09884 1462 aaPredicted RBP22.52■■□□□ 1.2
PPP6R1-205ENST00000589343 SOGA1O94964 1423 aa22.48■■□□□ 1.19
PPP6R1-205ENST00000589343 IFT140Q96RY7 1462 aa22.47■■□□□ 1.19
PPP6R1-205ENST00000589343 RAD54L2Q9Y4B4 1467 aa22.41■■□□□ 1.18
PPP6R1-205ENST00000589343 ABCA10Q8WWZ4 1543 aa22.36■■□□□ 1.17
PPP6R1-205ENST00000589343 TARBP1Q13395 1621 aaKnown RBP22.36■■□□□ 1.17
PPP6R1-205ENST00000589343 WDR97A6NE52 1622 aa22.28■■□□□ 1.16
PPP6R1-205ENST00000589343 TDRD9Q8NDG6 1382 aaKnown RBP22.27■■□□□ 1.16
PPP6R1-205ENST00000589343 KIF27Q86VH2 1401 aa22.27■■□□□ 1.16
PPP6R1-205ENST00000589343 ZNF608Q9ULD9 1512 aaPredicted RBP22.25■■□□□ 1.15
PPP6R1-205ENST00000589343 AQRO60306 1485 aaKnown RBP eCLIP22.22■■□□□ 1.15
PPP6R1-205ENST00000589343 GAPVD1Q14C86 1478 aa22.22■■□□□ 1.15
PPP6R1-205ENST00000589343 EEA1Q15075 1411 aa22.19■■□□□ 1.14
PPP6R1-205ENST00000589343 ABCA5Q8WWZ7 1642 aa22.17■■□□□ 1.14
PPP6R1-205ENST00000589343 EIF4G3O43432 1585 aaKnown RBP22.16■■□□□ 1.14
PPP6R1-205ENST00000589343 GRIN2BQ13224 1484 aa22.15■■□□□ 1.14
PPP6R1-205ENST00000589343 IGF1RP08069 1367 aa22.12■■□□□ 1.13
PPP6R1-205ENST00000589343 ERICH3Q5RHP9 1530 aa22.11■■□□□ 1.13
PPP6R1-205ENST00000589343 RUSC2Q8N2Y8 1516 aa22.11■■□□□ 1.13
PPP6R1-205ENST00000589343 CSRNP3Q8WYN3 585 aa22.09■■□□□ 1.13
PPP6R1-205ENST00000589343 FAM9AQ8IZU1 332 aaPredicted RBP22.05■■□□□ 1.12
PPP6R1-205ENST00000589343 MAGI1Q96QZ7 1491 aaPredicted RBP22.04■■□□□ 1.12
PPP6R1-205ENST00000589343 PBRM1Q86U86 1689 aa22.04■■□□□ 1.12
PPP6R1-205ENST00000589343 SNAPC4Q5SXM2 1469 aa22.02■■□□□ 1.12
PPP6R1-205ENST00000589343 CARMIL1Q5VZK9 1371 aa22■■□□□ 1.11
PPP6R1-205ENST00000589343 FHAD1B1AJZ9 1412 aa22■■□□□ 1.11
PPP6R1-205ENST00000589343 CUL7Q14999 1698 aa21.96■■□□□ 1.11
PPP6R1-205ENST00000589343 CHMP7Q8WUX9 453 aaPredicted RBP21.96■■□□□ 1.11
PPP6R1-205ENST00000589343 SYNJ2O15056 1496 aa21.94■■□□□ 1.1
PPP6R1-205ENST00000589343 ADAMTS12P58397 1594 aa21.93■■□□□ 1.1
PPP6R1-205ENST00000589343 PRXQ9BXM0 1461 aa21.92■■□□□ 1.1
PPP6R1-205ENST00000589343 FBLN2P98095 1184 aa21.92■■□□□ 1.1
PPP6R1-205ENST00000589343 RAPGEF2Q9Y4G8 1499 aa21.9■■□□□ 1.1
PPP6R1-205ENST00000589343 GRIN2AQ12879 1464 aa21.84■■□□□ 1.09
PPP6R1-205ENST00000589343 KIF21BO75037 1637 aa21.82■■□□□ 1.08
PPP6R1-205ENST00000589343 OSCARQ8IYS5 282 aa21.79■■□□□ 1.08
PPP6R1-205ENST00000589343 GOLGA3Q08378 1498 aa21.77■■□□□ 1.08
PPP6R1-205ENST00000589343 CHD1O14646 1710 aa21.77■■□□□ 1.08
PPP6R1-205ENST00000589343 NUP160Q12769 1436 aa21.74■■□□□ 1.07
PPP6R1-205ENST00000589343 UBTFP17480 764 aaKnown RBP21.73■■□□□ 1.07
PPP6R1-205ENST00000589343 EHMT2Q96KQ7 1210 aa21.68■■□□□ 1.06
PPP6R1-205ENST00000589343 KIAA0586Q9BVV6 1533 aa21.68■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms