RNA–Protein interactions for RNA: ENST00000589321.5

CACTIN-207, Transcript of cactin, spliceosome C complex subunit, humanhuman

TSL 5

Gene CACTIN, Length 1,708 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACTIN-207ENST00000589321 NISCHQ9Y2I1 1504 aa49.33■■■■■ 5.49
CACTIN-207ENST00000589321 CCDC180Q9P1Z9 1646 aa43.67■■■■■ 4.58
CACTIN-207ENST00000589321 ABCC9O60706 1549 aa42.32■■■■■ 4.36
CACTIN-207ENST00000589321 ZCCHC6Q5VYS8 1495 aaKnown RBP41.19■■■■■ 4.18
CACTIN-207ENST00000589321 DCAF8L2P0C7V8 631 aa40.96■■■■■ 4.15
CACTIN-207ENST00000589321 NACADO15069 1562 aa40.96■■■■■ 4.15
CACTIN-207ENST00000589321 RB1CC1Q8TDY2 1594 aa40.88■■■■■ 4.14
CACTIN-207ENST00000589321 MYO15BQ96JP2 1530 aa40.88■■■■■ 4.13
CACTIN-207ENST00000589321 DCAF1Q9Y4B6 1507 aa40.85■■■■■ 4.13
CACTIN-207ENST00000589321 UNC13AQ9UPW8 1703 aa40■■■■□ 3.99
CACTIN-207ENST00000589321 SCRIBQ14160 1630 aa39.86■■■■□ 3.97
CACTIN-207ENST00000589321 BICRAQ9NZM4 1560 aa39.69■■■■□ 3.94
CACTIN-207ENST00000589321 PABPN1Q86U42 306 aaKnown RBP eCLIP39.61■■■■□ 3.93
CACTIN-207ENST00000589321 SHROOM4Q9ULL8 1493 aa39.28■■■■□ 3.88
CACTIN-207ENST00000589321 DNAJC5BQ9UF47 199 aa39.19■■■■□ 3.86
CACTIN-207ENST00000589321 EIF4G1Q04637 1599 aaKnown RBP38.58■■■■□ 3.77
CACTIN-207ENST00000589321 CECR2Q9BXF3 1484 aa38.39■■■■□ 3.74
CACTIN-207ENST00000589321 CC2D2AQ9P2K1 1620 aa38.32■■■■□ 3.72
CACTIN-207ENST00000589321 BAZ1AQ9NRL2 1556 aaPredicted RBP38.19■■■■□ 3.7
CACTIN-207ENST00000589321 SMARCA4P51532 1647 aa38.19■■■■□ 3.7
CACTIN-207ENST00000589321 MROH2BQ7Z745 1585 aa38.03■■■■□ 3.68
CACTIN-207ENST00000589321 ATAD2BQ9ULI0 1458 aa37.88■■■■□ 3.65
CACTIN-207ENST00000589321 SMARCA2P51531 1590 aa37.83■■■■□ 3.65
CACTIN-207ENST00000589321 PEG3Q9GZU2 1588 aa37.83■■■■□ 3.65
CACTIN-207ENST00000589321 NCAPD3P42695 1498 aa37.8■■■■□ 3.64
CACTIN-207ENST00000589321 RSF1Q96T23 1441 aaPredicted RBP37.74■■■■□ 3.63
CACTIN-207ENST00000589321 HMGXB3Q12766 1538 aa37.65■■■■□ 3.62
CACTIN-207ENST00000589321 WIZO95785 1651 aa37.63■■■■□ 3.62
CACTIN-207ENST00000589321 BAZ1BQ9UIG0 1483 aaKnown RBP37.57■■■■□ 3.6
CACTIN-207ENST00000589321 TOP2AP11388 1531 aaKnown RBP37.25■■■■□ 3.55
CACTIN-207ENST00000589321 SUPT5HO00267 1087 aaKnown RBP37.02■■■■□ 3.52
CACTIN-207ENST00000589321 CCDC88BA6NC98 1476 aa36.81■■■■□ 3.48
CACTIN-207ENST00000589321 NESP48681 1621 aa36.77■■■■□ 3.48
CACTIN-207ENST00000589321 LAMC3Q9Y6N6 1575 aa36.72■■■■□ 3.47
CACTIN-207ENST00000589321 CADPSQ9ULU8 1353 aa36.71■■■■□ 3.47
CACTIN-207ENST00000589321 CFTRP13569 1480 aa36.6■■■■□ 3.45
CACTIN-207ENST00000589321 ERCC6Q03468 1493 aa36.48■■■■□ 3.43
CACTIN-207ENST00000589321 PDS5BQ9NTI5 1447 aa36.44■■■■□ 3.42
CACTIN-207ENST00000589321 KIF21AQ7Z4S6 1674 aa36.33■■■■□ 3.41
CACTIN-207ENST00000589321 PRDM2Q13029 1718 aa36.33■■■■□ 3.41
CACTIN-207ENST00000589321 FANCD2Q9BXW9 1451 aa36.28■■■■□ 3.4
CACTIN-207ENST00000589321 CEP164Q9UPV0 1460 aa36.19■■■■□ 3.38
CACTIN-207ENST00000589321 CUX2O14529 1486 aa36.16■■■■□ 3.38
CACTIN-207ENST00000589321 THOC2Q8NI27 1593 aaKnown RBP36.13■■■■□ 3.37
CACTIN-207ENST00000589321 MRC2Q9UBG0 1479 aa36.06■■■■□ 3.36
CACTIN-207ENST00000589321 WDR62O43379 1518 aa35.95■■■■□ 3.35
CACTIN-207ENST00000589321 URB2Q14146 1524 aaKnown RBP35.92■■■■□ 3.34
CACTIN-207ENST00000589321 TOPBP1Q92547 1522 aa35.76■■■■□ 3.31
CACTIN-207ENST00000589321 ABCC8Q09428 1581 aa35.75■■■■□ 3.31
CACTIN-207ENST00000589321 DNMBPQ6XZF7 1577 aa35.74■■■■□ 3.31
CACTIN-207ENST00000589321 CUX1P39880 1505 aa35.65■■■■□ 3.3
CACTIN-207ENST00000589321 DNAJC5Q9H3Z4 198 aa35.57■■■■□ 3.29
CACTIN-207ENST00000589321 WRNQ14191 1432 aaPredicted RBP eCLIP35.55■■■■□ 3.285e-6■■■■■ 54.3
CACTIN-207ENST00000589321 POLA1P09884 1462 aaPredicted RBP35.49■■■■□ 3.27
CACTIN-207ENST00000589321 CHIC1Q5VXU3 224 aa35.47■■■■□ 3.27
CACTIN-207ENST00000589321 SYNJ1O43426 1573 aa35.46■■■■□ 3.27
CACTIN-207ENST00000589321 FGD5Q6ZNL6 1462 aa35.45■■■■□ 3.27
CACTIN-207ENST00000589321 TOP2BQ02880 1626 aa35.45■■■■□ 3.26
CACTIN-207ENST00000589321 BIVM-ERCC5R4GMW8 1640 aa35.44■■■■□ 3.26
CACTIN-207ENST00000589321 IFT140Q96RY7 1462 aa35.42■■■■□ 3.26
CACTIN-207ENST00000589321 TARBP1Q13395 1621 aaKnown RBP35.35■■■■□ 3.25
CACTIN-207ENST00000589321 SOGA1O94964 1423 aa35.32■■■■□ 3.24
CACTIN-207ENST00000589321 RAD54L2Q9Y4B4 1467 aa35.32■■■■□ 3.24
CACTIN-207ENST00000589321 ZNF608Q9ULD9 1512 aaPredicted RBP35.24■■■■□ 3.23
CACTIN-207ENST00000589321 WDR97A6NE52 1622 aa35.16■■■■□ 3.22
CACTIN-207ENST00000589321 ABCA10Q8WWZ4 1543 aa35.14■■■■□ 3.22
CACTIN-207ENST00000589321 EIF4G3O43432 1585 aaKnown RBP35.12■■■■□ 3.21
CACTIN-207ENST00000589321 AQRO60306 1485 aaKnown RBP eCLIP35.09■■■■□ 3.212e-6■■■■□ 24.9
CACTIN-207ENST00000589321 TDRD9Q8NDG6 1382 aaKnown RBP35.08■■■■□ 3.21
CACTIN-207ENST00000589321 ABCA5Q8WWZ7 1642 aa34.97■■■■□ 3.19
CACTIN-207ENST00000589321 TRIM41Q8WV44 630 aa34.95■■■■□ 3.18
CACTIN-207ENST00000589321 GAPVD1Q14C86 1478 aa34.93■■■■□ 3.18
CACTIN-207ENST00000589321 GRIN2BQ13224 1484 aa34.87■■■■□ 3.17
CACTIN-207ENST00000589321 PBRM1Q86U86 1689 aa34.83■■■■□ 3.17
CACTIN-207ENST00000589321 SNAPC4Q5SXM2 1469 aa34.77■■■■□ 3.16
CACTIN-207ENST00000589321 KIF27Q86VH2 1401 aa34.77■■■■□ 3.16
CACTIN-207ENST00000589321 MAGI1Q96QZ7 1491 aaPredicted RBP34.74■■■■□ 3.15
CACTIN-207ENST00000589321 ERICH3Q5RHP9 1530 aa34.72■■■■□ 3.15
CACTIN-207ENST00000589321 OSCARQ8IYS5 282 aa34.67■■■■□ 3.14
CACTIN-207ENST00000589321 RUSC2Q8N2Y8 1516 aa34.61■■■■□ 3.13
CACTIN-207ENST00000589321 IGF1RP08069 1367 aa34.6■■■■□ 3.13
CACTIN-207ENST00000589321 SYNJ2O15056 1496 aa34.6■■■■□ 3.13
CACTIN-207ENST00000589321 ADAMTS12P58397 1594 aa34.6■■■■□ 3.13
CACTIN-207ENST00000589321 CHD1O14646 1710 aa34.59■■■■□ 3.13
CACTIN-207ENST00000589321 FHAD1B1AJZ9 1412 aa34.54■■■■□ 3.12
CACTIN-207ENST00000589321 FBLN2P98095 1184 aa34.52■■■■□ 3.12
CACTIN-207ENST00000589321 CHMP7Q8WUX9 453 aaPredicted RBP34.52■■■■□ 3.12
CACTIN-207ENST00000589321 CUL7Q14999 1698 aa34.47■■■■□ 3.11
CACTIN-207ENST00000589321 GRIN2AQ12879 1464 aa34.43■■■■□ 3.1
CACTIN-207ENST00000589321 CARMIL1Q5VZK9 1371 aa34.39■■■■□ 3.1
CACTIN-207ENST00000589321 EEA1Q15075 1411 aa34.36■■■■□ 3.09
CACTIN-207ENST00000589321 NUP160Q12769 1436 aa34.28■■■■□ 3.08
CACTIN-207ENST00000589321 CSRNP3Q8WYN3 585 aa34.26■■■■□ 3.07
CACTIN-207ENST00000589321 CEP170Q5SW79 1584 aa34.26■■■■□ 3.07
CACTIN-207ENST00000589321 CLASP1Q7Z460 1538 aa34.25■■■■□ 3.07
CACTIN-207ENST00000589321 PRXQ9BXM0 1461 aa34.24■■■■□ 3.07
CACTIN-207ENST00000589321 RAPGEF2Q9Y4G8 1499 aa34.23■■■■□ 3.07
CACTIN-207ENST00000589321 FAM9AQ8IZU1 332 aaPredicted RBP34.2■■■■□ 3.07
CACTIN-207ENST00000589321 RIMBP3CA6NJZ7 1639 aa34.12■■■■□ 3.05
CACTIN-207ENST00000589321 RIMBP3BA6NNM3 1639 aa34.12■■■■□ 3.05
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms