RNA–Protein interactions for RNA: ENST00000589305.5

RDH13-213, Transcript of retinol dehydrogenase 13, humanhuman

TSL 5

Gene RDH13, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH13-213ENST00000589305 NISCHQ9Y2I1 1504 aa47.1■■■■■ 5.13
RDH13-213ENST00000589305 CCDC180Q9P1Z9 1646 aa41.82■■■■■ 4.29
RDH13-213ENST00000589305 ABCC9O60706 1549 aa40.88■■■■■ 4.14
RDH13-213ENST00000589305 DCAF8L2P0C7V8 631 aa39.4■■■■□ 3.9
RDH13-213ENST00000589305 RB1CC1Q8TDY2 1594 aa39.38■■■■□ 3.9
RDH13-213ENST00000589305 NACADO15069 1562 aa39.36■■■■□ 3.89
RDH13-213ENST00000589305 ZCCHC6Q5VYS8 1495 aaKnown RBP39.23■■■■□ 3.87
RDH13-213ENST00000589305 MYO15BQ96JP2 1530 aa39.16■■■■□ 3.86
RDH13-213ENST00000589305 DCAF1Q9Y4B6 1507 aa39■■■■□ 3.83
RDH13-213ENST00000589305 UNC13AQ9UPW8 1703 aa38.38■■■■□ 3.73
RDH13-213ENST00000589305 PABPN1Q86U42 306 aaKnown RBP eCLIP38.25■■■■□ 3.71
RDH13-213ENST00000589305 SCRIBQ14160 1630 aa38.14■■■■□ 3.7
RDH13-213ENST00000589305 BICRAQ9NZM4 1560 aa38.14■■■■□ 3.7
RDH13-213ENST00000589305 SHROOM4Q9ULL8 1493 aa37.82■■■■□ 3.64
RDH13-213ENST00000589305 DNAJC5BQ9UF47 199 aa37.5■■■■□ 3.59
RDH13-213ENST00000589305 EIF4G1Q04637 1599 aaKnown RBP37.14■■■■□ 3.54
RDH13-213ENST00000589305 CC2D2AQ9P2K1 1620 aa36.97■■■■□ 3.51
RDH13-213ENST00000589305 CECR2Q9BXF3 1484 aa36.75■■■■□ 3.47
RDH13-213ENST00000589305 BAZ1AQ9NRL2 1556 aaPredicted RBP36.51■■■■□ 3.44
RDH13-213ENST00000589305 SMARCA4P51532 1647 aa36.51■■■■□ 3.43
RDH13-213ENST00000589305 NCAPD3P42695 1498 aa36.34■■■■□ 3.41
RDH13-213ENST00000589305 ATAD2BQ9ULI0 1458 aa36.33■■■■□ 3.41
RDH13-213ENST00000589305 SMARCA2P51531 1590 aa36.3■■■■□ 3.4
RDH13-213ENST00000589305 MROH2BQ7Z745 1585 aa36.27■■■■□ 3.4
RDH13-213ENST00000589305 PEG3Q9GZU2 1588 aa36.17■■■■□ 3.38
RDH13-213ENST00000589305 HMGXB3Q12766 1538 aa36.12■■■■□ 3.37
RDH13-213ENST00000589305 BAZ1BQ9UIG0 1483 aaKnown RBP36.04■■■■□ 3.36
RDH13-213ENST00000589305 RSF1Q96T23 1441 aaPredicted RBP35.91■■■■□ 3.34
RDH13-213ENST00000589305 WIZO95785 1651 aa35.87■■■■□ 3.33
RDH13-213ENST00000589305 TOP2AP11388 1531 aaKnown RBP35.52■■■■□ 3.28
RDH13-213ENST00000589305 NESP48681 1621 aa35.38■■■■□ 3.25
RDH13-213ENST00000589305 LAMC3Q9Y6N6 1575 aa35.34■■■■□ 3.25
RDH13-213ENST00000589305 CADPSQ9ULU8 1353 aa35.29■■■■□ 3.24
RDH13-213ENST00000589305 ERCC6Q03468 1493 aa35.27■■■■□ 3.24
RDH13-213ENST00000589305 PDS5BQ9NTI5 1447 aa35.15■■■■□ 3.22
RDH13-213ENST00000589305 CCDC88BA6NC98 1476 aa35.13■■■■□ 3.21
RDH13-213ENST00000589305 SUPT5HO00267 1087 aaKnown RBP35.07■■■■□ 3.2
RDH13-213ENST00000589305 CFTRP13569 1480 aa35.07■■■■□ 3.2
RDH13-213ENST00000589305 KIF21AQ7Z4S6 1674 aa34.92■■■■□ 3.18
RDH13-213ENST00000589305 CUX2O14529 1486 aa34.89■■■■□ 3.18
RDH13-213ENST00000589305 FANCD2Q9BXW9 1451 aa34.84■■■■□ 3.17
RDH13-213ENST00000589305 THOC2Q8NI27 1593 aaKnown RBP34.81■■■■□ 3.16
RDH13-213ENST00000589305 CEP164Q9UPV0 1460 aa34.8■■■■□ 3.16
RDH13-213ENST00000589305 MRC2Q9UBG0 1479 aa34.74■■■■□ 3.15
RDH13-213ENST00000589305 PRDM2Q13029 1718 aa34.71■■■■□ 3.15
RDH13-213ENST00000589305 WDR62O43379 1518 aa34.6■■■■□ 3.13
RDH13-213ENST00000589305 URB2Q14146 1524 aaKnown RBP34.47■■■■□ 3.11
RDH13-213ENST00000589305 ABCC8Q09428 1581 aa34.36■■■■□ 3.09
RDH13-213ENST00000589305 TOPBP1Q92547 1522 aa34.29■■■■□ 3.08
RDH13-213ENST00000589305 DNMBPQ6XZF7 1577 aa34.24■■■■□ 3.07
RDH13-213ENST00000589305 IFT140Q96RY7 1462 aa34.09■■■■□ 3.05
RDH13-213ENST00000589305 CUX1P39880 1505 aa34.03■■■■□ 3.04
RDH13-213ENST00000589305 POLA1P09884 1462 aaPredicted RBP33.99■■■■□ 3.03
RDH13-213ENST00000589305 FGD5Q6ZNL6 1462 aa33.92■■■■□ 3.02
RDH13-213ENST00000589305 SOGA1O94964 1423 aa33.91■■■■□ 3.02
RDH13-213ENST00000589305 TARBP1Q13395 1621 aaKnown RBP33.88■■■■□ 3.01
RDH13-213ENST00000589305 ZNF608Q9ULD9 1512 aaPredicted RBP33.88■■■■□ 3.01
RDH13-213ENST00000589305 WRNQ14191 1432 aaPredicted RBP eCLIP33.87■■■■□ 3.01
RDH13-213ENST00000589305 RAD54L2Q9Y4B4 1467 aa33.84■■■■□ 3.01
RDH13-213ENST00000589305 DNAJC5Q9H3Z4 198 aa33.8■■■■□ 3
RDH13-213ENST00000589305 TOP2BQ02880 1626 aa33.75■■■□□ 2.99
RDH13-213ENST00000589305 BIVM-ERCC5R4GMW8 1640 aa33.74■■■□□ 2.99
RDH13-213ENST00000589305 AQRO60306 1485 aaKnown RBP eCLIP33.73■■■□□ 2.996e-7■■■■□ 22.2
RDH13-213ENST00000589305 EIF4G3O43432 1585 aaKnown RBP33.72■■■□□ 2.99
RDH13-213ENST00000589305 SYNJ1O43426 1573 aa33.72■■■□□ 2.99
RDH13-213ENST00000589305 TDRD9Q8NDG6 1382 aaKnown RBP33.69■■■□□ 2.98
RDH13-213ENST00000589305 WDR97A6NE52 1622 aa33.66■■■□□ 2.98
RDH13-213ENST00000589305 ABCA10Q8WWZ4 1543 aa33.61■■■□□ 2.97
RDH13-213ENST00000589305 OSCARQ8IYS5 282 aa33.52■■■□□ 2.96
RDH13-213ENST00000589305 GAPVD1Q14C86 1478 aa33.5■■■□□ 2.95
RDH13-213ENST00000589305 GRIN2BQ13224 1484 aa33.49■■■□□ 2.95
RDH13-213ENST00000589305 ABCA5Q8WWZ7 1642 aa33.42■■■□□ 2.94
RDH13-213ENST00000589305 SNAPC4Q5SXM2 1469 aa33.4■■■□□ 2.94
RDH13-213ENST00000589305 MAGI1Q96QZ7 1491 aaPredicted RBP33.39■■■□□ 2.94
RDH13-213ENST00000589305 FBLN2P98095 1184 aa33.36■■■□□ 2.93
RDH13-213ENST00000589305 PBRM1Q86U86 1689 aa33.34■■■□□ 2.93
RDH13-213ENST00000589305 CHMP7Q8WUX9 453 aaPredicted RBP33.3■■■□□ 2.92
RDH13-213ENST00000589305 CHD1O14646 1710 aa33.27■■■□□ 2.92
RDH13-213ENST00000589305 SYNJ2O15056 1496 aa33.25■■■□□ 2.91
RDH13-213ENST00000589305 ERICH3Q5RHP9 1530 aa33.22■■■□□ 2.91
RDH13-213ENST00000589305 KIF27Q86VH2 1401 aa33.19■■■□□ 2.9
RDH13-213ENST00000589305 TRIM41Q8WV44 630 aa33.16■■■□□ 2.9
RDH13-213ENST00000589305 FHAD1B1AJZ9 1412 aa33.12■■■□□ 2.89
RDH13-213ENST00000589305 ADAMTS12P58397 1594 aa33.1■■■□□ 2.89
RDH13-213ENST00000589305 IGF1RP08069 1367 aa33.05■■■□□ 2.88
RDH13-213ENST00000589305 GRIN2AQ12879 1464 aa33.04■■■□□ 2.88
RDH13-213ENST00000589305 CLASP1Q7Z460 1538 aa32.95■■■□□ 2.87
RDH13-213ENST00000589305 NUP160Q12769 1436 aa32.9■■■□□ 2.86
RDH13-213ENST00000589305 CUL7Q14999 1698 aa32.9■■■□□ 2.86
RDH13-213ENST00000589305 ARHGEF11O15085 1522 aa32.87■■■□□ 2.85
RDH13-213ENST00000589305 CARMIL1Q5VZK9 1371 aa32.85■■■□□ 2.85
RDH13-213ENST00000589305 RIMBP3CA6NJZ7 1639 aa32.85■■■□□ 2.85
RDH13-213ENST00000589305 RIMBP3BA6NNM3 1639 aa32.85■■■□□ 2.85
RDH13-213ENST00000589305 RIMBP3Q9UFD9 1639 aa32.85■■■□□ 2.85
RDH13-213ENST00000589305 RUSC2Q8N2Y8 1516 aa32.83■■■□□ 2.85
RDH13-213ENST00000589305 CEP170Q5SW79 1584 aa32.83■■■□□ 2.85
RDH13-213ENST00000589305 CHIC1Q5VXU3 224 aa32.77■■■□□ 2.84
RDH13-213ENST00000589305 RAPGEF2Q9Y4G8 1499 aa32.65■■■□□ 2.82
RDH13-213ENST00000589305 CYB5RLQ6IPT4 315 aa32.64■■■□□ 2.82
RDH13-213ENST00000589305 JPH4Q96JJ6 628 aa32.63■■■□□ 2.81
Retrieved 100 of 20,778 RNA–protein pairs in 167.3 ms