RNA–Protein interactions for RNA: ENST00000589246.1

SEPT9-224, Transcript of septin 9, humanhuman

TSL 2

Gene SEPT9, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEPT9-224ENST00000589246 NISCHQ9Y2I1 1504 aa34.29■■■■□ 3.08
SEPT9-224ENST00000589246 CCDC180Q9P1Z9 1646 aa30.11■■■□□ 2.41
SEPT9-224ENST00000589246 ZCCHC6Q5VYS8 1495 aaKnown RBP28.78■■■□□ 2.2
SEPT9-224ENST00000589246 DCAF1Q9Y4B6 1507 aa28.51■■■□□ 2.15
SEPT9-224ENST00000589246 ABCC9O60706 1549 aa28.38■■■□□ 2.13
SEPT9-224ENST00000589246 MYO15BQ96JP2 1530 aa28.28■■■□□ 2.12
SEPT9-224ENST00000589246 DCAF8L2P0C7V8 631 aa28.23■■■□□ 2.11
SEPT9-224ENST00000589246 NACADO15069 1562 aa28.08■■■□□ 2.09
SEPT9-224ENST00000589246 RB1CC1Q8TDY2 1594 aa27.86■■■□□ 2.05
SEPT9-224ENST00000589246 SHROOM4Q9ULL8 1493 aa27.61■■■□□ 2.01
SEPT9-224ENST00000589246 SCRIBQ14160 1630 aa27.45■■□□□ 1.98
SEPT9-224ENST00000589246 UNC13AQ9UPW8 1703 aa27.04■■□□□ 1.92
SEPT9-224ENST00000589246 BICRAQ9NZM4 1560 aa26.83■■□□□ 1.89
SEPT9-224ENST00000589246 PABPN1Q86U42 306 aaKnown RBP eCLIP26.66■■□□□ 1.86
SEPT9-224ENST00000589246 BAZ1AQ9NRL2 1556 aaPredicted RBP26.58■■□□□ 1.85
SEPT9-224ENST00000589246 SUPT5HO00267 1087 aaKnown RBP26.56■■□□□ 1.84
SEPT9-224ENST00000589246 CECR2Q9BXF3 1484 aa26.49■■□□□ 1.83
SEPT9-224ENST00000589246 RSF1Q96T23 1441 aaPredicted RBP26.48■■□□□ 1.83
SEPT9-224ENST00000589246 SMARCA4P51532 1647 aa26.38■■□□□ 1.81
SEPT9-224ENST00000589246 MROH2BQ7Z745 1585 aa26.37■■□□□ 1.81
SEPT9-224ENST00000589246 PEG3Q9GZU2 1588 aa26.15■■□□□ 1.78
SEPT9-224ENST00000589246 WIZO95785 1651 aa26.12■■□□□ 1.77
SEPT9-224ENST00000589246 EIF4G1Q04637 1599 aaKnown RBP26.12■■□□□ 1.77
SEPT9-224ENST00000589246 SMARCA2P51531 1590 aa26.09■■□□□ 1.77
SEPT9-224ENST00000589246 TOP2AP11388 1531 aaKnown RBP26.02■■□□□ 1.76
SEPT9-224ENST00000589246 ATAD2BQ9ULI0 1458 aa25.99■■□□□ 1.75
SEPT9-224ENST00000589246 BAZ1BQ9UIG0 1483 aaKnown RBP25.88■■□□□ 1.73
SEPT9-224ENST00000589246 NCAPD3P42695 1498 aa25.86■■□□□ 1.73
SEPT9-224ENST00000589246 HMGXB3Q12766 1538 aa25.85■■□□□ 1.73
SEPT9-224ENST00000589246 CC2D2AQ9P2K1 1620 aa25.73■■□□□ 1.71
SEPT9-224ENST00000589246 CCDC88BA6NC98 1476 aa25.65■■□□□ 1.7
SEPT9-224ENST00000589246 CHIC1Q5VXU3 224 aa25.38■■□□□ 1.65
SEPT9-224ENST00000589246 CFTRP13569 1480 aa25.21■■□□□ 1.63
SEPT9-224ENST00000589246 CADPSQ9ULU8 1353 aa25.17■■□□□ 1.62
SEPT9-224ENST00000589246 TRIM41Q8WV44 630 aa25.13■■□□□ 1.61
SEPT9-224ENST00000589246 PRDM2Q13029 1718 aa25.09■■□□□ 1.61
SEPT9-224ENST00000589246 LAMC3Q9Y6N6 1575 aa25.05■■□□□ 1.6
SEPT9-224ENST00000589246 DNAJC5BQ9UF47 199 aa25■■□□□ 1.59
SEPT9-224ENST00000589246 WRNQ14191 1432 aaPredicted RBP eCLIP25■■□□□ 1.59
SEPT9-224ENST00000589246 ABCC8Q09428 1581 aa24.96■■□□□ 1.59
SEPT9-224ENST00000589246 PDS5BQ9NTI5 1447 aa24.89■■□□□ 1.58
SEPT9-224ENST00000589246 FANCD2Q9BXW9 1451 aa24.86■■□□□ 1.57
SEPT9-224ENST00000589246 TOP2BQ02880 1626 aa24.82■■□□□ 1.56
SEPT9-224ENST00000589246 NESP48681 1621 aa24.79■■□□□ 1.56
SEPT9-224ENST00000589246 BIVM-ERCC5R4GMW8 1640 aa24.79■■□□□ 1.56
SEPT9-224ENST00000589246 SYNJ1O43426 1573 aa24.79■■□□□ 1.56
SEPT9-224ENST00000589246 CEP164Q9UPV0 1460 aa24.77■■□□□ 1.56
SEPT9-224ENST00000589246 EEA1Q15075 1411 aa24.73■■□□□ 1.55
SEPT9-224ENST00000589246 CUX1P39880 1505 aa24.71■■□□□ 1.55
SEPT9-224ENST00000589246 DNMBPQ6XZF7 1577 aa24.66■■□□□ 1.54
SEPT9-224ENST00000589246 KIF21AQ7Z4S6 1674 aa24.56■■□□□ 1.52
SEPT9-224ENST00000589246 TOPBP1Q92547 1522 aa24.56■■□□□ 1.52
SEPT9-224ENST00000589246 MRC2Q9UBG0 1479 aa24.51■■□□□ 1.51
SEPT9-224ENST00000589246 ERCC6Q03468 1493 aa24.5■■□□□ 1.51
SEPT9-224ENST00000589246 FGD5Q6ZNL6 1462 aa24.5■■□□□ 1.51
SEPT9-224ENST00000589246 URB2Q14146 1524 aaKnown RBP24.49■■□□□ 1.51
SEPT9-224ENST00000589246 SOGA1O94964 1423 aa24.48■■□□□ 1.51
SEPT9-224ENST00000589246 FAM9AQ8IZU1 332 aaPredicted RBP24.47■■□□□ 1.51
SEPT9-224ENST00000589246 KIF27Q86VH2 1401 aa24.44■■□□□ 1.5
SEPT9-224ENST00000589246 CSRNP3Q8WYN3 585 aa24.43■■□□□ 1.5
SEPT9-224ENST00000589246 POLA1P09884 1462 aaPredicted RBP24.41■■□□□ 1.5
SEPT9-224ENST00000589246 WDR62O43379 1518 aa24.37■■□□□ 1.49
SEPT9-224ENST00000589246 ABCA10Q8WWZ4 1543 aa24.35■■□□□ 1.49
SEPT9-224ENST00000589246 CUX2O14529 1486 aa24.33■■□□□ 1.49
SEPT9-224ENST00000589246 RUSC2Q8N2Y8 1516 aa24.32■■□□□ 1.48
SEPT9-224ENST00000589246 KIF21BO75037 1637 aa24.28■■□□□ 1.48
SEPT9-224ENST00000589246 THOC2Q8NI27 1593 aaKnown RBP24.27■■□□□ 1.48
SEPT9-224ENST00000589246 LOC105371045A0A1W2PR82 267 aa24.26■■□□□ 1.47
SEPT9-224ENST00000589246 GOLGA3Q08378 1498 aa24.26■■□□□ 1.47
SEPT9-224ENST00000589246 IFT140Q96RY7 1462 aa24.23■■□□□ 1.47
SEPT9-224ENST00000589246 RAD54L2Q9Y4B4 1467 aa24.23■■□□□ 1.47
SEPT9-224ENST00000589246 WDR97A6NE52 1622 aa24.21■■□□□ 1.47
SEPT9-224ENST00000589246 ERICH3Q5RHP9 1530 aa24.2■■□□□ 1.46
SEPT9-224ENST00000589246 TARBP1Q13395 1621 aaKnown RBP24.17■■□□□ 1.46
SEPT9-224ENST00000589246 PRXQ9BXM0 1461 aa24.16■■□□□ 1.46
SEPT9-224ENST00000589246 TNIKQ9UKE5 1360 aa24.14■■□□□ 1.45
SEPT9-224ENST00000589246 IGF1RP08069 1367 aa24.13■■□□□ 1.45
SEPT9-224ENST00000589246 ABCA5Q8WWZ7 1642 aa24.12■■□□□ 1.45
SEPT9-224ENST00000589246 GAPVD1Q14C86 1478 aa24.11■■□□□ 1.45
SEPT9-224ENST00000589246 CUL7Q14999 1698 aa24.1■■□□□ 1.45
SEPT9-224ENST00000589246 UBTFP17480 764 aaKnown RBP24.08■■□□□ 1.45
SEPT9-224ENST00000589246 CARMIL1Q5VZK9 1371 aa24.05■■□□□ 1.44
SEPT9-224ENST00000589246 RAPGEF2Q9Y4G8 1499 aa24.05■■□□□ 1.44
SEPT9-224ENST00000589246 TDRD9Q8NDG6 1382 aaKnown RBP24.04■■□□□ 1.44
SEPT9-224ENST00000589246 EHMT2Q96KQ7 1210 aa24■■□□□ 1.43
SEPT9-224ENST00000589246 GRIN2BQ13224 1484 aa24■■□□□ 1.43
SEPT9-224ENST00000589246 PBRM1Q86U86 1689 aa23.94■■□□□ 1.42
SEPT9-224ENST00000589246 CEP162Q5TB80 1403 aa23.92■■□□□ 1.42
SEPT9-224ENST00000589246 AQRO60306 1485 aaKnown RBP eCLIP23.91■■□□□ 1.421e-6■■■■■ 38.5
SEPT9-224ENST00000589246 FHAD1B1AJZ9 1412 aa23.9■■□□□ 1.42
SEPT9-224ENST00000589246 EIF4G3O43432 1585 aaKnown RBP23.9■■□□□ 1.42
SEPT9-224ENST00000589246 ZNF608Q9ULD9 1512 aaPredicted RBP23.89■■□□□ 1.41
SEPT9-224ENST00000589246 MAGI1Q96QZ7 1491 aaPredicted RBP23.84■■□□□ 1.41
SEPT9-224ENST00000589246 ADAMTS12P58397 1594 aa23.83■■□□□ 1.41
SEPT9-224ENST00000589246 CLIP1P30622 1438 aa23.81■■□□□ 1.4
SEPT9-224ENST00000589246 SNAPC4Q5SXM2 1469 aa23.76■■□□□ 1.39
SEPT9-224ENST00000589246 CTTNBP2Q8WZ74 1663 aa23.72■■□□□ 1.39
SEPT9-224ENST00000589246 SYNJ2O15056 1496 aa23.71■■□□□ 1.39
SEPT9-224ENST00000589246 GRIN2AQ12879 1464 aa23.65■■□□□ 1.38
SEPT9-224ENST00000589246 EFCAB5A4FU69 1503 aa23.64■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms