RNA–Protein interactions for RNA: ENST00000589229.5

CELF4-213, Transcript of CUGBP Elav-like family member 4, humanhuman

TSL 3

Gene CELF4, Length 592 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CELF4-213ENST00000589229 NISCHQ9Y2I1 1504 aa26.9■■□□□ 1.9
CELF4-213ENST00000589229 CCDC180Q9P1Z9 1646 aa23.72■■□□□ 1.39
CELF4-213ENST00000589229 ABCC9O60706 1549 aa22.78■■□□□ 1.24
CELF4-213ENST00000589229 ZCCHC6Q5VYS8 1495 aaKnown RBP22.51■■□□□ 1.19
CELF4-213ENST00000589229 DCAF8L2P0C7V8 631 aa22.33■■□□□ 1.17
CELF4-213ENST00000589229 DCAF1Q9Y4B6 1507 aa22.31■■□□□ 1.16
CELF4-213ENST00000589229 MYO15BQ96JP2 1530 aa22.26■■□□□ 1.15
CELF4-213ENST00000589229 NACADO15069 1562 aa22.23■■□□□ 1.15
CELF4-213ENST00000589229 RB1CC1Q8TDY2 1594 aa22.15■■□□□ 1.14
CELF4-213ENST00000589229 SCRIBQ14160 1630 aa21.66■■□□□ 1.06
CELF4-213ENST00000589229 SHROOM4Q9ULL8 1493 aa21.51■■□□□ 1.03
CELF4-213ENST00000589229 UNC13AQ9UPW8 1703 aa21.48■■□□□ 1.03
CELF4-213ENST00000589229 BICRAQ9NZM4 1560 aa21.38■■□□□ 1.01
CELF4-213ENST00000589229 PABPN1Q86U42 306 aaKnown RBP eCLIP21.37■■□□□ 1.01
CELF4-213ENST00000589229 CECR2Q9BXF3 1484 aa20.87■□□□□ 0.93
CELF4-213ENST00000589229 BAZ1AQ9NRL2 1556 aaPredicted RBP20.85■□□□□ 0.93
CELF4-213ENST00000589229 EIF4G1Q04637 1599 aaKnown RBP20.82■□□□□ 0.92
CELF4-213ENST00000589229 SMARCA4P51532 1647 aa20.76■□□□□ 0.91
CELF4-213ENST00000589229 MROH2BQ7Z745 1585 aa20.71■□□□□ 0.91
CELF4-213ENST00000589229 RSF1Q96T23 1441 aaPredicted RBP20.67■□□□□ 0.9
CELF4-213ENST00000589229 CC2D2AQ9P2K1 1620 aa20.6■□□□□ 0.89
CELF4-213ENST00000589229 SMARCA2P51531 1590 aa20.6■□□□□ 0.89
CELF4-213ENST00000589229 PEG3Q9GZU2 1588 aa20.57■□□□□ 0.88
CELF4-213ENST00000589229 ATAD2BQ9ULI0 1458 aa20.56■□□□□ 0.88
CELF4-213ENST00000589229 NCAPD3P42695 1498 aa20.5■□□□□ 0.87
CELF4-213ENST00000589229 SUPT5HO00267 1087 aaKnown RBP20.49■□□□□ 0.87
CELF4-213ENST00000589229 WIZO95785 1651 aa20.48■□□□□ 0.87
CELF4-213ENST00000589229 DNAJC5BQ9UF47 199 aa20.46■□□□□ 0.87
CELF4-213ENST00000589229 BAZ1BQ9UIG0 1483 aaKnown RBP20.45■□□□□ 0.86
CELF4-213ENST00000589229 HMGXB3Q12766 1538 aa20.45■□□□□ 0.86
CELF4-213ENST00000589229 TOP2AP11388 1531 aaKnown RBP20.36■□□□□ 0.85
CELF4-213ENST00000589229 CCDC88BA6NC98 1476 aa20.11■□□□□ 0.81
CELF4-213ENST00000589229 CADPSQ9ULU8 1353 aa19.95■□□□□ 0.78
CELF4-213ENST00000589229 CFTRP13569 1480 aa19.9■□□□□ 0.78
CELF4-213ENST00000589229 LAMC3Q9Y6N6 1575 aa19.89■□□□□ 0.77
CELF4-213ENST00000589229 NESP48681 1621 aa19.81■□□□□ 0.76
CELF4-213ENST00000589229 PDS5BQ9NTI5 1447 aa19.79■□□□□ 0.76
CELF4-213ENST00000589229 FANCD2Q9BXW9 1451 aa19.7■□□□□ 0.74
CELF4-213ENST00000589229 PRDM2Q13029 1718 aa19.7■□□□□ 0.74
CELF4-213ENST00000589229 ERCC6Q03468 1493 aa19.67■□□□□ 0.74
CELF4-213ENST00000589229 CEP164Q9UPV0 1460 aa19.66■□□□□ 0.74
CELF4-213ENST00000589229 KIF21AQ7Z4S6 1674 aa19.56■□□□□ 0.72
CELF4-213ENST00000589229 MRC2Q9UBG0 1479 aa19.53■□□□□ 0.72
CELF4-213ENST00000589229 ABCC8Q09428 1581 aa19.51■□□□□ 0.71
CELF4-213ENST00000589229 WRNQ14191 1432 aaPredicted RBP eCLIP19.51■□□□□ 0.71
CELF4-213ENST00000589229 DNMBPQ6XZF7 1577 aa19.44■□□□□ 0.7
CELF4-213ENST00000589229 URB2Q14146 1524 aaKnown RBP19.44■□□□□ 0.7
CELF4-213ENST00000589229 WDR62O43379 1518 aa19.42■□□□□ 0.7
CELF4-213ENST00000589229 TOPBP1Q92547 1522 aa19.42■□□□□ 0.7
CELF4-213ENST00000589229 THOC2Q8NI27 1593 aaKnown RBP19.42■□□□□ 0.7
CELF4-213ENST00000589229 CUX1P39880 1505 aa19.41■□□□□ 0.7
CELF4-213ENST00000589229 TOP2BQ02880 1626 aa19.38■□□□□ 0.69
CELF4-213ENST00000589229 TRIM41Q8WV44 630 aa19.38■□□□□ 0.69
CELF4-213ENST00000589229 CHIC1Q5VXU3 224 aa19.37■□□□□ 0.69
CELF4-213ENST00000589229 SYNJ1O43426 1573 aa19.36■□□□□ 0.69
CELF4-213ENST00000589229 BIVM-ERCC5R4GMW8 1640 aa19.35■□□□□ 0.69
CELF4-213ENST00000589229 FGD5Q6ZNL6 1462 aa19.3■□□□□ 0.68
CELF4-213ENST00000589229 CUX2O14529 1486 aa19.29■□□□□ 0.68
CELF4-213ENST00000589229 POLA1P09884 1462 aaPredicted RBP19.28■□□□□ 0.68
CELF4-213ENST00000589229 SOGA1O94964 1423 aa19.25■□□□□ 0.67
CELF4-213ENST00000589229 IFT140Q96RY7 1462 aa19.23■□□□□ 0.67
CELF4-213ENST00000589229 RAD54L2Q9Y4B4 1467 aa19.17■□□□□ 0.66
CELF4-213ENST00000589229 ABCA10Q8WWZ4 1543 aa19.15■□□□□ 0.66
CELF4-213ENST00000589229 TARBP1Q13395 1621 aaKnown RBP19.13■□□□□ 0.65
CELF4-213ENST00000589229 KIF27Q86VH2 1401 aa19.09■□□□□ 0.65
CELF4-213ENST00000589229 WDR97A6NE52 1622 aa19.09■□□□□ 0.65
CELF4-213ENST00000589229 TDRD9Q8NDG6 1382 aaKnown RBP19.06■□□□□ 0.64
CELF4-213ENST00000589229 DNAJC5Q9H3Z4 198 aa19.06■□□□□ 0.64
CELF4-213ENST00000589229 EEA1Q15075 1411 aa19.06■□□□□ 0.64
CELF4-213ENST00000589229 ZNF608Q9ULD9 1512 aaPredicted RBP19.04■□□□□ 0.64
CELF4-213ENST00000589229 GAPVD1Q14C86 1478 aa19.03■□□□□ 0.64
CELF4-213ENST00000589229 AQRO60306 1485 aaKnown RBP eCLIP19.01■□□□□ 0.63
CELF4-213ENST00000589229 ABCA5Q8WWZ7 1642 aa19■□□□□ 0.63
CELF4-213ENST00000589229 EIF4G3O43432 1585 aaKnown RBP18.99■□□□□ 0.63
CELF4-213ENST00000589229 GRIN2BQ13224 1484 aa18.97■□□□□ 0.63
CELF4-213ENST00000589229 ERICH3Q5RHP9 1530 aa18.95■□□□□ 0.62
CELF4-213ENST00000589229 RUSC2Q8N2Y8 1516 aa18.93■□□□□ 0.62
CELF4-213ENST00000589229 IGF1RP08069 1367 aa18.92■□□□□ 0.62
CELF4-213ENST00000589229 FAM9AQ8IZU1 332 aaPredicted RBP18.91■□□□□ 0.62
CELF4-213ENST00000589229 CSRNP3Q8WYN3 585 aa18.91■□□□□ 0.62
CELF4-213ENST00000589229 MAGI1Q96QZ7 1491 aaPredicted RBP18.89■□□□□ 0.61
CELF4-213ENST00000589229 PBRM1Q86U86 1689 aa18.87■□□□□ 0.61
CELF4-213ENST00000589229 SNAPC4Q5SXM2 1469 aa18.86■□□□□ 0.61
CELF4-213ENST00000589229 CUL7Q14999 1698 aa18.85■□□□□ 0.61
CELF4-213ENST00000589229 FHAD1B1AJZ9 1412 aa18.84■□□□□ 0.61
CELF4-213ENST00000589229 CARMIL1Q5VZK9 1371 aa18.83■□□□□ 0.61
CELF4-213ENST00000589229 ADAMTS12P58397 1594 aa18.81■□□□□ 0.6
CELF4-213ENST00000589229 SYNJ2O15056 1496 aa18.8■□□□□ 0.6
CELF4-213ENST00000589229 PRXQ9BXM0 1461 aa18.79■□□□□ 0.6
CELF4-213ENST00000589229 CHMP7Q8WUX9 453 aaPredicted RBP18.78■□□□□ 0.6
CELF4-213ENST00000589229 RAPGEF2Q9Y4G8 1499 aa18.77■□□□□ 0.6
CELF4-213ENST00000589229 FBLN2P98095 1184 aa18.75■□□□□ 0.59
CELF4-213ENST00000589229 KIF21BO75037 1637 aa18.74■□□□□ 0.59
CELF4-213ENST00000589229 GRIN2AQ12879 1464 aa18.71■□□□□ 0.59
CELF4-213ENST00000589229 GOLGA3Q08378 1498 aa18.71■□□□□ 0.59
CELF4-213ENST00000589229 UBTFP17480 764 aaKnown RBP18.63■□□□□ 0.57
CELF4-213ENST00000589229 CHD1O14646 1710 aa18.61■□□□□ 0.57
CELF4-213ENST00000589229 NUP160Q12769 1436 aa18.61■□□□□ 0.57
CELF4-213ENST00000589229 EHMT2Q96KQ7 1210 aa18.61■□□□□ 0.57
CELF4-213ENST00000589229 OSCARQ8IYS5 282 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms