RNA–Protein interactions for RNA: ENST00000589086.1

PTPN2-207, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

TSL 4

Gene PTPN2, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-207ENST00000589086 NISCHQ9Y2I1 1504 aa31.85■■■□□ 2.69
PTPN2-207ENST00000589086 CCDC180Q9P1Z9 1646 aa27.89■■■□□ 2.05
PTPN2-207ENST00000589086 ZCCHC6Q5VYS8 1495 aaKnown RBP26.72■■□□□ 1.87
PTPN2-207ENST00000589086 DCAF8L2P0C7V8 631 aa26.42■■□□□ 1.82
PTPN2-207ENST00000589086 DCAF1Q9Y4B6 1507 aa26.38■■□□□ 1.81
PTPN2-207ENST00000589086 ABCC9O60706 1549 aa26.35■■□□□ 1.81
PTPN2-207ENST00000589086 MYO15BQ96JP2 1530 aa26.1■■□□□ 1.77
PTPN2-207ENST00000589086 NACADO15069 1562 aa25.99■■□□□ 1.75
PTPN2-207ENST00000589086 SHROOM4Q9ULL8 1493 aa25.91■■□□□ 1.74
PTPN2-207ENST00000589086 RB1CC1Q8TDY2 1594 aa25.8■■□□□ 1.72
PTPN2-207ENST00000589086 SCRIBQ14160 1630 aa25.56■■□□□ 1.68
PTPN2-207ENST00000589086 UNC13AQ9UPW8 1703 aa25.19■■□□□ 1.62
PTPN2-207ENST00000589086 SUPT5HO00267 1087 aaKnown RBP24.96■■□□□ 1.59
PTPN2-207ENST00000589086 BICRAQ9NZM4 1560 aa24.88■■□□□ 1.57
PTPN2-207ENST00000589086 PABPN1Q86U42 306 aaKnown RBP eCLIP24.82■■□□□ 1.56
PTPN2-207ENST00000589086 CECR2Q9BXF3 1484 aa24.69■■□□□ 1.54
PTPN2-207ENST00000589086 BAZ1AQ9NRL2 1556 aaPredicted RBP24.66■■□□□ 1.54
PTPN2-207ENST00000589086 RSF1Q96T23 1441 aaPredicted RBP24.65■■□□□ 1.54
PTPN2-207ENST00000589086 MROH2BQ7Z745 1585 aa24.56■■□□□ 1.52
PTPN2-207ENST00000589086 SMARCA4P51532 1647 aa24.51■■□□□ 1.51
PTPN2-207ENST00000589086 WIZO95785 1651 aa24.39■■□□□ 1.49
PTPN2-207ENST00000589086 PEG3Q9GZU2 1588 aa24.2■■□□□ 1.47
PTPN2-207ENST00000589086 EIF4G1Q04637 1599 aaKnown RBP24.19■■□□□ 1.46
PTPN2-207ENST00000589086 SMARCA2P51531 1590 aa24.18■■□□□ 1.46
PTPN2-207ENST00000589086 TOP2AP11388 1531 aaKnown RBP24.17■■□□□ 1.46
PTPN2-207ENST00000589086 ATAD2BQ9ULI0 1458 aa24.11■■□□□ 1.45
PTPN2-207ENST00000589086 BAZ1BQ9UIG0 1483 aaKnown RBP24.02■■□□□ 1.44
PTPN2-207ENST00000589086 NCAPD3P42695 1498 aa23.94■■□□□ 1.42
PTPN2-207ENST00000589086 HMGXB3Q12766 1538 aa23.91■■□□□ 1.42
PTPN2-207ENST00000589086 CCDC88BA6NC98 1476 aa23.89■■□□□ 1.42
PTPN2-207ENST00000589086 CC2D2AQ9P2K1 1620 aa23.86■■□□□ 1.41
PTPN2-207ENST00000589086 CHIC1Q5VXU3 224 aa23.82■■□□□ 1.4
PTPN2-207ENST00000589086 TRIM41Q8WV44 630 aa23.53■■□□□ 1.36
PTPN2-207ENST00000589086 CFTRP13569 1480 aa23.37■■□□□ 1.33
PTPN2-207ENST00000589086 PRDM2Q13029 1718 aa23.34■■□□□ 1.33
PTPN2-207ENST00000589086 CADPSQ9ULU8 1353 aa23.34■■□□□ 1.33
PTPN2-207ENST00000589086 ABCC8Q09428 1581 aa23.34■■□□□ 1.33
PTPN2-207ENST00000589086 WRNQ14191 1432 aaPredicted RBP eCLIP23.27■■□□□ 1.32
PTPN2-207ENST00000589086 DNAJC5BQ9UF47 199 aa23.19■■□□□ 1.3
PTPN2-207ENST00000589086 LAMC3Q9Y6N6 1575 aa23.18■■□□□ 1.3
PTPN2-207ENST00000589086 SYNJ1O43426 1573 aa23.11■■□□□ 1.29
PTPN2-207ENST00000589086 TOP2BQ02880 1626 aa23.08■■□□□ 1.29
PTPN2-207ENST00000589086 FANCD2Q9BXW9 1451 aa23.07■■□□□ 1.28
PTPN2-207ENST00000589086 NESP48681 1621 aa23.07■■□□□ 1.28
PTPN2-207ENST00000589086 BIVM-ERCC5R4GMW8 1640 aa23.06■■□□□ 1.28
PTPN2-207ENST00000589086 PDS5BQ9NTI5 1447 aa23.03■■□□□ 1.28
PTPN2-207ENST00000589086 FAM9AQ8IZU1 332 aaPredicted RBP23.03■■□□□ 1.28
PTPN2-207ENST00000589086 EEA1Q15075 1411 aa22.99■■□□□ 1.27
PTPN2-207ENST00000589086 CUX1P39880 1505 aa22.98■■□□□ 1.27
PTPN2-207ENST00000589086 CEP164Q9UPV0 1460 aa22.97■■□□□ 1.27
PTPN2-207ENST00000589086 SOGA1O94964 1423 aa22.88■■□□□ 1.25
PTPN2-207ENST00000589086 LOC105371045A0A1W2PR82 267 aa22.87■■□□□ 1.25
PTPN2-207ENST00000589086 DNMBPQ6XZF7 1577 aa22.87■■□□□ 1.25
PTPN2-207ENST00000589086 KIF21AQ7Z4S6 1674 aa22.85■■□□□ 1.25
PTPN2-207ENST00000589086 CSRNP3Q8WYN3 585 aa22.82■■□□□ 1.24
PTPN2-207ENST00000589086 TOPBP1Q92547 1522 aa22.8■■□□□ 1.24
PTPN2-207ENST00000589086 FGD5Q6ZNL6 1462 aa22.78■■□□□ 1.24
PTPN2-207ENST00000589086 RUSC2Q8N2Y8 1516 aa22.77■■□□□ 1.24
PTPN2-207ENST00000589086 URB2Q14146 1524 aaKnown RBP22.73■■□□□ 1.23
PTPN2-207ENST00000589086 KIF27Q86VH2 1401 aa22.73■■□□□ 1.23
PTPN2-207ENST00000589086 MRC2Q9UBG0 1479 aa22.7■■□□□ 1.22
PTPN2-207ENST00000589086 ERCC6Q03468 1493 aa22.69■■□□□ 1.22
PTPN2-207ENST00000589086 EHMT2Q96KQ7 1210 aa22.68■■□□□ 1.22
PTPN2-207ENST00000589086 POLA1P09884 1462 aaPredicted RBP22.66■■□□□ 1.22
PTPN2-207ENST00000589086 CUX2O14529 1486 aa22.65■■□□□ 1.22
PTPN2-207ENST00000589086 KIF21BO75037 1637 aa22.62■■□□□ 1.21
PTPN2-207ENST00000589086 GOLGA3Q08378 1498 aa22.61■■□□□ 1.21
PTPN2-207ENST00000589086 ABCA10Q8WWZ4 1543 aa22.59■■□□□ 1.21
PTPN2-207ENST00000589086 UBTFP17480 764 aaKnown RBP22.57■■□□□ 1.2
PTPN2-207ENST00000589086 RAD54L2Q9Y4B4 1467 aa22.57■■□□□ 1.2
PTPN2-207ENST00000589086 WDR62O43379 1518 aa22.54■■□□□ 1.2
PTPN2-207ENST00000589086 TNIKQ9UKE5 1360 aa22.52■■□□□ 1.2
PTPN2-207ENST00000589086 WDR97A6NE52 1622 aa22.49■■□□□ 1.19
PTPN2-207ENST00000589086 ERICH3Q5RHP9 1530 aa22.49■■□□□ 1.19
PTPN2-207ENST00000589086 PRXQ9BXM0 1461 aa22.47■■□□□ 1.19
PTPN2-207ENST00000589086 THOC2Q8NI27 1593 aaKnown RBP22.46■■□□□ 1.19
PTPN2-207ENST00000589086 IGF1RP08069 1367 aa22.46■■□□□ 1.19
PTPN2-207ENST00000589086 TARBP1Q13395 1621 aaKnown RBP22.44■■□□□ 1.18
PTPN2-207ENST00000589086 IFT140Q96RY7 1462 aa22.43■■□□□ 1.18
PTPN2-207ENST00000589086 RAPGEF2Q9Y4G8 1499 aa22.43■■□□□ 1.18
PTPN2-207ENST00000589086 CARMIL1Q5VZK9 1371 aa22.4■■□□□ 1.18
PTPN2-207ENST00000589086 ABCA5Q8WWZ7 1642 aa22.39■■□□□ 1.18
PTPN2-207ENST00000589086 GAPVD1Q14C86 1478 aa22.39■■□□□ 1.17
PTPN2-207ENST00000589086 TDRD9Q8NDG6 1382 aaKnown RBP22.38■■□□□ 1.17
PTPN2-207ENST00000589086 CUL7Q14999 1698 aa22.38■■□□□ 1.17
PTPN2-207ENST00000589086 CEP162Q5TB80 1403 aa22.36■■□□□ 1.17
PTPN2-207ENST00000589086 PBRM1Q86U86 1689 aa22.28■■□□□ 1.16
PTPN2-207ENST00000589086 AQRO60306 1485 aaKnown RBP eCLIP22.24■■□□□ 1.15
PTPN2-207ENST00000589086 GRIN2BQ13224 1484 aa22.24■■□□□ 1.15
PTPN2-207ENST00000589086 CLIP1P30622 1438 aa22.23■■□□□ 1.15
PTPN2-207ENST00000589086 ZNF608Q9ULD9 1512 aaPredicted RBP22.2■■□□□ 1.14
PTPN2-207ENST00000589086 EIF4G3O43432 1585 aaKnown RBP22.17■■□□□ 1.14
PTPN2-207ENST00000589086 FHAD1B1AJZ9 1412 aa22.16■■□□□ 1.14
PTPN2-207ENST00000589086 RANGAP1P46060 587 aaPredicted RBP22.15■■□□□ 1.14
PTPN2-207ENST00000589086 ADAMTS12P58397 1594 aa22.12■■□□□ 1.13
PTPN2-207ENST00000589086 CTTNBP2Q8WZ74 1663 aa22.11■■□□□ 1.13
PTPN2-207ENST00000589086 MAGI1Q96QZ7 1491 aaPredicted RBP22.07■■□□□ 1.12
PTPN2-207ENST00000589086 SNAPC4Q5SXM2 1469 aa22.06■■□□□ 1.12
PTPN2-207ENST00000589086 VPS8Q8N3P4 1428 aa22.02■■□□□ 1.12
PTPN2-207ENST00000589086 APLP2Q06481 763 aa21.98■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms