RNA–Protein interactions for RNA: ENST00000588954.5

ZNF440-206, Transcript of zinc finger protein 440, humanhuman

TSL 5

Gene ZNF440, Length 556 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF440-206ENST00000588954 NISCHQ9Y2I1 1504 aa21.94■■□□□ 1.1
ZNF440-206ENST00000588954 AEBP2Q6ZN18 517 aaPredicted RBP20.92■□□□□ 0.94
ZNF440-206ENST00000588954 CHIC1Q5VXU3 224 aa20.44■□□□□ 0.86
ZNF440-206ENST00000588954 CCDC180Q9P1Z9 1646 aa19.4■□□□□ 0.7
ZNF440-206ENST00000588954 ABCC9O60706 1549 aa18.86■□□□□ 0.61
ZNF440-206ENST00000588954 DCAF8L2P0C7V8 631 aa18.38■□□□□ 0.53
ZNF440-206ENST00000588954 ZCCHC6Q5VYS8 1495 aaKnown RBP18.29■□□□□ 0.52
ZNF440-206ENST00000588954 NACADO15069 1562 aa18.25■□□□□ 0.51
ZNF440-206ENST00000588954 RB1CC1Q8TDY2 1594 aa18.23■□□□□ 0.51
ZNF440-206ENST00000588954 MYO15BQ96JP2 1530 aa18.18■□□□□ 0.5
ZNF440-206ENST00000588954 DCAF1Q9Y4B6 1507 aa18.16■□□□□ 0.5
ZNF440-206ENST00000588954 PHF23Q9BUL5 403 aaPredicted RBP18.06■□□□□ 0.48
ZNF440-206ENST00000588954 SCRIBQ14160 1630 aa17.74■□□□□ 0.43
ZNF440-206ENST00000588954 UNC13AQ9UPW8 1703 aa17.72■□□□□ 0.43
ZNF440-206ENST00000588954 PABPN1Q86U42 306 aaKnown RBP eCLIP17.69■□□□□ 0.42
ZNF440-206ENST00000588954 SENP3Q9H4L4 574 aaPredicted RBP17.61■□□□□ 0.41
ZNF440-206ENST00000588954 BICRAQ9NZM4 1560 aa17.59■□□□□ 0.41
ZNF440-206ENST00000588954 SHROOM4Q9ULL8 1493 aa17.5■□□□□ 0.39
ZNF440-206ENST00000588954 EIF4G1Q04637 1599 aaKnown RBP17.16■□□□□ 0.34
ZNF440-206ENST00000588954 DNAJC5BQ9UF47 199 aa17.13■□□□□ 0.33
ZNF440-206ENST00000588954 CECR2Q9BXF3 1484 aa17.05■□□□□ 0.32
ZNF440-206ENST00000588954 CC2D2AQ9P2K1 1620 aa17.04■□□□□ 0.32
ZNF440-206ENST00000588954 BAZ1AQ9NRL2 1556 aaPredicted RBP17.02■□□□□ 0.31
ZNF440-206ENST00000588954 SMARCA4P51532 1647 aa16.96■□□□□ 0.31
ZNF440-206ENST00000588954 MROH2BQ7Z745 1585 aa16.89■□□□□ 0.3
ZNF440-206ENST00000588954 SMARCA2P51531 1590 aa16.86■□□□□ 0.29
ZNF440-206ENST00000588954 ATAD2BQ9ULI0 1458 aa16.86■□□□□ 0.29
ZNF440-206ENST00000588954 NCAPD3P42695 1498 aa16.83■□□□□ 0.28
ZNF440-206ENST00000588954 PEG3Q9GZU2 1588 aa16.79■□□□□ 0.28
ZNF440-206ENST00000588954 RSF1Q96T23 1441 aaPredicted RBP16.79■□□□□ 0.28
ZNF440-206ENST00000588954 BAZ1BQ9UIG0 1483 aaKnown RBP16.75■□□□□ 0.27
ZNF440-206ENST00000588954 HMGXB3Q12766 1538 aa16.75■□□□□ 0.27
ZNF440-206ENST00000588954 WIZO95785 1651 aa16.72■□□□□ 0.27
ZNF440-206ENST00000588954 TOP2AP11388 1531 aaKnown RBP16.57■□□□□ 0.24
ZNF440-206ENST00000588954 SUPT5HO00267 1087 aaKnown RBP16.57■□□□□ 0.24
ZNF440-206ENST00000588954 PLPPR3Q6T4P5 718 aa16.57■□□□□ 0.24
ZNF440-206ENST00000588954 FOXD1Q16676 465 aa16.41■□□□□ 0.22
ZNF440-206ENST00000588954 CCDC88BA6NC98 1476 aa16.39■□□□□ 0.21
ZNF440-206ENST00000588954 CADPSQ9ULU8 1353 aa16.38■□□□□ 0.21
ZNF440-206ENST00000588954 LAMC3Q9Y6N6 1575 aa16.35■□□□□ 0.21
ZNF440-206ENST00000588954 NESP48681 1621 aa16.34■□□□□ 0.21
ZNF440-206ENST00000588954 ERCC6Q03468 1493 aa16.29■□□□□ 0.2
ZNF440-206ENST00000588954 PDS5BQ9NTI5 1447 aa16.29■□□□□ 0.2
ZNF440-206ENST00000588954 CFTRP13569 1480 aa16.29■□□□□ 0.2
ZNF440-206ENST00000588954 FANCD2Q9BXW9 1451 aa16.17■□□□□ 0.18
ZNF440-206ENST00000588954 CEP164Q9UPV0 1460 aa16.14■□□□□ 0.17
ZNF440-206ENST00000588954 KIF21AQ7Z4S6 1674 aa16.13■□□□□ 0.17
ZNF440-206ENST00000588954 PRDM2Q13029 1718 aa16.12■□□□□ 0.17
ZNF440-206ENST00000588954 MRC2Q9UBG0 1479 aa16.08■□□□□ 0.16
ZNF440-206ENST00000588954 THOC2Q8NI27 1593 aaKnown RBP16.03■□□□□ 0.16
ZNF440-206ENST00000588954 CUX2O14529 1486 aa16.03■□□□□ 0.16
ZNF440-206ENST00000588954 ABCC8Q09428 1581 aa15.98■□□□□ 0.15
ZNF440-206ENST00000588954 WDR62O43379 1518 aa15.98■□□□□ 0.15
ZNF440-206ENST00000588954 URB2Q14146 1524 aaKnown RBP15.96■□□□□ 0.15
ZNF440-206ENST00000588954 TOPBP1Q92547 1522 aa15.92■□□□□ 0.14
ZNF440-206ENST00000588954 DNMBPQ6XZF7 1577 aa15.91■□□□□ 0.14
ZNF440-206ENST00000588954 PPP6R1Q9UPN7 881 aa15.9■□□□□ 0.14
ZNF440-206ENST00000588954 WRNQ14191 1432 aaPredicted RBP eCLIP15.85■□□□□ 0.13
ZNF440-206ENST00000588954 CUX1P39880 1505 aa15.84■□□□□ 0.13
ZNF440-206ENST00000588954 ADRA2BP18089 450 aa15.84■□□□□ 0.13
ZNF440-206ENST00000588954 IFT140Q96RY7 1462 aa15.8■□□□□ 0.12
ZNF440-206ENST00000588954 POLA1P09884 1462 aaPredicted RBP15.78■□□□□ 0.12
ZNF440-206ENST00000588954 FGD5Q6ZNL6 1462 aa15.78■□□□□ 0.12
ZNF440-206ENST00000588954 SOGA1O94964 1423 aa15.77■□□□□ 0.12
ZNF440-206ENST00000588954 TOP2BQ02880 1626 aa15.76■□□□□ 0.11
ZNF440-206ENST00000588954 BIVM-ERCC5R4GMW8 1640 aa15.74■□□□□ 0.11
ZNF440-206ENST00000588954 SYNJ1O43426 1573 aa15.74■□□□□ 0.11
ZNF440-206ENST00000588954 RAD54L2Q9Y4B4 1467 aa15.72■□□□□ 0.11
ZNF440-206ENST00000588954 TARBP1Q13395 1621 aaKnown RBP15.69■□□□□ 0.1
ZNF440-206ENST00000588954 ZNF608Q9ULD9 1512 aaPredicted RBP15.68■□□□□ 0.1
ZNF440-206ENST00000588954 TRIM41Q8WV44 630 aa15.67■□□□□ 0.1
ZNF440-206ENST00000588954 TDRD9Q8NDG6 1382 aaKnown RBP15.65■□□□□ 0.1
ZNF440-206ENST00000588954 ABCA10Q8WWZ4 1543 aa15.64■□□□□ 0.09
ZNF440-206ENST00000588954 AQRO60306 1485 aaKnown RBP eCLIP15.64■□□□□ 0.093e-6■■■□□ 19.2
ZNF440-206ENST00000588954 WDR97A6NE52 1622 aa15.62■□□□□ 0.09
ZNF440-206ENST00000588954 EIF4G3O43432 1585 aaKnown RBP15.61■□□□□ 0.09
ZNF440-206ENST00000588954 GAPVD1Q14C86 1478 aa15.58■□□□□ 0.08
ZNF440-206ENST00000588954 GRIN2BQ13224 1484 aa15.56■□□□□ 0.08
ZNF440-206ENST00000588954 KIF27Q86VH2 1401 aa15.53■□□□□ 0.08
ZNF440-206ENST00000588954 ABCA5Q8WWZ7 1642 aa15.52■□□□□ 0.08
ZNF440-206ENST00000588954 SNAPC4Q5SXM2 1469 aa15.49■□□□□ 0.07
ZNF440-206ENST00000588954 MAGI1Q96QZ7 1491 aaPredicted RBP15.49■□□□□ 0.07
ZNF440-206ENST00000588954 FBLN2P98095 1184 aa15.49■□□□□ 0.07
ZNF440-206ENST00000588954 PBRM1Q86U86 1689 aa15.48■□□□□ 0.07
ZNF440-206ENST00000588954 CHMP7Q8WUX9 453 aaPredicted RBP15.47■□□□□ 0.07
ZNF440-206ENST00000588954 OSCARQ8IYS5 282 aa15.46■□□□□ 0.07
ZNF440-206ENST00000588954 ERICH3Q5RHP9 1530 aa15.46■□□□□ 0.07
ZNF440-206ENST00000588954 PIAS4Q8N2W9 510 aaPredicted RBP15.44■□□□□ 0.06
ZNF440-206ENST00000588954 SYNJ2O15056 1496 aa15.43■□□□□ 0.06
ZNF440-206ENST00000588954 IGF1RP08069 1367 aa15.42■□□□□ 0.06
ZNF440-206ENST00000588954 FHAD1B1AJZ9 1412 aa15.42■□□□□ 0.06
ZNF440-206ENST00000588954 ADAMTS12P58397 1594 aa15.38■□□□□ 0.05
ZNF440-206ENST00000588954 RUSC2Q8N2Y8 1516 aa15.37■□□□□ 0.05
ZNF440-206ENST00000588954 CHD1O14646 1710 aa15.37■□□□□ 0.05
ZNF440-206ENST00000588954 EEA1Q15075 1411 aa15.36■□□□□ 0.05
ZNF440-206ENST00000588954 DNAJC5Q9H3Z4 198 aa15.36■□□□□ 0.05
ZNF440-206ENST00000588954 CARMIL1Q5VZK9 1371 aa15.36■□□□□ 0.05
ZNF440-206ENST00000588954 CUL7Q14999 1698 aa15.35■□□□□ 0.05
ZNF440-206ENST00000588954 GRIN2AQ12879 1464 aa15.33■□□□□ 0.05
ZNF440-206ENST00000588954 CSRNP3Q8WYN3 585 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms