RNA–Protein interactions for RNA: ENST00000588746.5

TRMT1-212, Transcript of tRNA methyltransferase 1, humanhuman

TSL 4

Gene TRMT1, Length 562 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRMT1-212ENST00000588746 NISCHQ9Y2I1 1504 aa35.93■■■■□ 3.34
TRMT1-212ENST00000588746 CCDC180Q9P1Z9 1646 aa31.62■■■□□ 2.65
TRMT1-212ENST00000588746 ABCC9O60706 1549 aa30.66■■■□□ 2.5
TRMT1-212ENST00000588746 ZCCHC6Q5VYS8 1495 aaKnown RBP30.02■■■□□ 2.4
TRMT1-212ENST00000588746 DCAF8L2P0C7V8 631 aa29.91■■■□□ 2.38
TRMT1-212ENST00000588746 DCAF1Q9Y4B6 1507 aa29.71■■■□□ 2.35
TRMT1-212ENST00000588746 NACADO15069 1562 aa29.69■■■□□ 2.34
TRMT1-212ENST00000588746 MYO15BQ96JP2 1530 aa29.66■■■□□ 2.34
TRMT1-212ENST00000588746 RB1CC1Q8TDY2 1594 aa29.59■■■□□ 2.33
TRMT1-212ENST00000588746 SCRIBQ14160 1630 aa28.98■■■□□ 2.23
TRMT1-212ENST00000588746 UNC13AQ9UPW8 1703 aa28.89■■■□□ 2.21
TRMT1-212ENST00000588746 PABPN1Q86U42 306 aaKnown RBP eCLIP28.79■■■□□ 2.2
TRMT1-212ENST00000588746 BICRAQ9NZM4 1560 aa28.76■■■□□ 2.19
TRMT1-212ENST00000588746 SHROOM4Q9ULL8 1493 aa28.74■■■□□ 2.19
TRMT1-212ENST00000588746 CECR2Q9BXF3 1484 aa28.02■■■□□ 2.08
TRMT1-212ENST00000588746 EIF4G1Q04637 1599 aaKnown RBP27.93■■■□□ 2.06
TRMT1-212ENST00000588746 DNAJC5BQ9UF47 199 aa27.85■■■□□ 2.05
TRMT1-212ENST00000588746 BAZ1AQ9NRL2 1556 aaPredicted RBP27.77■■■□□ 2.04
TRMT1-212ENST00000588746 SMARCA4P51532 1647 aa27.74■■■□□ 2.03
TRMT1-212ENST00000588746 MROH2BQ7Z745 1585 aa27.74■■■□□ 2.03
TRMT1-212ENST00000588746 CC2D2AQ9P2K1 1620 aa27.7■■■□□ 2.02
TRMT1-212ENST00000588746 RSF1Q96T23 1441 aaPredicted RBP27.6■■■□□ 2.01
TRMT1-212ENST00000588746 ATAD2BQ9ULI0 1458 aa27.55■■■□□ 2
TRMT1-212ENST00000588746 PEG3Q9GZU2 1588 aa27.47■■□□□ 1.99
TRMT1-212ENST00000588746 NCAPD3P42695 1498 aa27.45■■□□□ 1.99
TRMT1-212ENST00000588746 SMARCA2P51531 1590 aa27.45■■□□□ 1.99
TRMT1-212ENST00000588746 WIZO95785 1651 aa27.42■■□□□ 1.98
TRMT1-212ENST00000588746 BAZ1BQ9UIG0 1483 aaKnown RBP27.29■■□□□ 1.96
TRMT1-212ENST00000588746 HMGXB3Q12766 1538 aa27.29■■□□□ 1.96
TRMT1-212ENST00000588746 SUPT5HO00267 1087 aaKnown RBP27.27■■□□□ 1.96
TRMT1-212ENST00000588746 TOP2AP11388 1531 aaKnown RBP27.14■■□□□ 1.94
TRMT1-212ENST00000588746 CCDC88BA6NC98 1476 aa26.88■■□□□ 1.89
TRMT1-212ENST00000588746 CADPSQ9ULU8 1353 aa26.69■■□□□ 1.86
TRMT1-212ENST00000588746 NESP48681 1621 aa26.68■■□□□ 1.86
TRMT1-212ENST00000588746 CFTRP13569 1480 aa26.61■■□□□ 1.85
TRMT1-212ENST00000588746 LAMC3Q9Y6N6 1575 aa26.58■■□□□ 1.85
TRMT1-212ENST00000588746 PDS5BQ9NTI5 1447 aa26.42■■□□□ 1.82
TRMT1-212ENST00000588746 FANCD2Q9BXW9 1451 aa26.36■■□□□ 1.81
TRMT1-212ENST00000588746 ERCC6Q03468 1493 aa26.32■■□□□ 1.8
TRMT1-212ENST00000588746 PRDM2Q13029 1718 aa26.26■■□□□ 1.79
TRMT1-212ENST00000588746 KIF21AQ7Z4S6 1674 aa26.26■■□□□ 1.79
TRMT1-212ENST00000588746 CEP164Q9UPV0 1460 aa26.24■■□□□ 1.79
TRMT1-212ENST00000588746 MRC2Q9UBG0 1479 aa26.12■■□□□ 1.77
TRMT1-212ENST00000588746 THOC2Q8NI27 1593 aaKnown RBP26.1■■□□□ 1.77
TRMT1-212ENST00000588746 URB2Q14146 1524 aaKnown RBP26.09■■□□□ 1.77
TRMT1-212ENST00000588746 ABCC8Q09428 1581 aa26.02■■□□□ 1.76
TRMT1-212ENST00000588746 WDR62O43379 1518 aa26.01■■□□□ 1.75
TRMT1-212ENST00000588746 TOPBP1Q92547 1522 aa25.98■■□□□ 1.75
TRMT1-212ENST00000588746 CUX1P39880 1505 aa25.98■■□□□ 1.75
TRMT1-212ENST00000588746 WRNQ14191 1432 aaPredicted RBP eCLIP25.97■■□□□ 1.75
TRMT1-212ENST00000588746 DNMBPQ6XZF7 1577 aa25.95■■□□□ 1.75
TRMT1-212ENST00000588746 SYNJ1O43426 1573 aa25.87■■□□□ 1.73
TRMT1-212ENST00000588746 CUX2O14529 1486 aa25.87■■□□□ 1.73
TRMT1-212ENST00000588746 TOP2BQ02880 1626 aa25.82■■□□□ 1.72
TRMT1-212ENST00000588746 POLA1P09884 1462 aaPredicted RBP25.8■■□□□ 1.72
TRMT1-212ENST00000588746 FGD5Q6ZNL6 1462 aa25.8■■□□□ 1.72
TRMT1-212ENST00000588746 BIVM-ERCC5R4GMW8 1640 aa25.79■■□□□ 1.72
TRMT1-212ENST00000588746 CHIC1Q5VXU3 224 aa25.75■■□□□ 1.71
TRMT1-212ENST00000588746 RAD54L2Q9Y4B4 1467 aa25.72■■□□□ 1.71
TRMT1-212ENST00000588746 SOGA1O94964 1423 aa25.72■■□□□ 1.71
TRMT1-212ENST00000588746 TRIM41Q8WV44 630 aa25.7■■□□□ 1.7
TRMT1-212ENST00000588746 IFT140Q96RY7 1462 aa25.69■■□□□ 1.7
TRMT1-212ENST00000588746 TARBP1Q13395 1621 aaKnown RBP25.65■■□□□ 1.7
TRMT1-212ENST00000588746 ZNF608Q9ULD9 1512 aaPredicted RBP25.59■■□□□ 1.69
TRMT1-212ENST00000588746 ABCA10Q8WWZ4 1543 aa25.57■■□□□ 1.68
TRMT1-212ENST00000588746 TDRD9Q8NDG6 1382 aaKnown RBP25.55■■□□□ 1.68
TRMT1-212ENST00000588746 AQRO60306 1485 aaKnown RBP eCLIP25.52■■□□□ 1.683e-6■■■■□ 25.4
TRMT1-212ENST00000588746 WDR97A6NE52 1622 aa25.49■■□□□ 1.67
TRMT1-212ENST00000588746 EIF4G3O43432 1585 aaKnown RBP25.42■■□□□ 1.66
TRMT1-212ENST00000588746 GAPVD1Q14C86 1478 aa25.4■■□□□ 1.66
TRMT1-212ENST00000588746 RUSC2Q8N2Y8 1516 aa25.39■■□□□ 1.66
TRMT1-212ENST00000588746 ABCA5Q8WWZ7 1642 aa25.39■■□□□ 1.66
TRMT1-212ENST00000588746 KIF27Q86VH2 1401 aa25.37■■□□□ 1.65
TRMT1-212ENST00000588746 GRIN2BQ13224 1484 aa25.33■■□□□ 1.65
TRMT1-212ENST00000588746 IGF1RP08069 1367 aa25.3■■□□□ 1.64
TRMT1-212ENST00000588746 SNAPC4Q5SXM2 1469 aa25.25■■□□□ 1.63
TRMT1-212ENST00000588746 ERICH3Q5RHP9 1530 aa25.24■■□□□ 1.63
TRMT1-212ENST00000588746 PBRM1Q86U86 1689 aa25.23■■□□□ 1.63
TRMT1-212ENST00000588746 FAM9AQ8IZU1 332 aaPredicted RBP25.21■■□□□ 1.63
TRMT1-212ENST00000588746 MAGI1Q96QZ7 1491 aaPredicted RBP25.19■■□□□ 1.62
TRMT1-212ENST00000588746 EEA1Q15075 1411 aa25.16■■□□□ 1.62
TRMT1-212ENST00000588746 CSRNP3Q8WYN3 585 aa25.16■■□□□ 1.62
TRMT1-212ENST00000588746 FHAD1B1AJZ9 1412 aa25.13■■□□□ 1.61
TRMT1-212ENST00000588746 CARMIL1Q5VZK9 1371 aa25.12■■□□□ 1.61
TRMT1-212ENST00000588746 ADAMTS12P58397 1594 aa25.11■■□□□ 1.61
TRMT1-212ENST00000588746 FBLN2P98095 1184 aa25.11■■□□□ 1.61
TRMT1-212ENST00000588746 SYNJ2O15056 1496 aa25.1■■□□□ 1.61
TRMT1-212ENST00000588746 CHMP7Q8WUX9 453 aaPredicted RBP25.1■■□□□ 1.61
TRMT1-212ENST00000588746 CUL7Q14999 1698 aa25.04■■□□□ 1.6
TRMT1-212ENST00000588746 PRXQ9BXM0 1461 aa25.04■■□□□ 1.6
TRMT1-212ENST00000588746 GRIN2AQ12879 1464 aa25.01■■□□□ 1.59
TRMT1-212ENST00000588746 RAPGEF2Q9Y4G8 1499 aa24.99■■□□□ 1.59
TRMT1-212ENST00000588746 CHD1O14646 1710 aa24.98■■□□□ 1.59
TRMT1-212ENST00000588746 OSCARQ8IYS5 282 aa24.95■■□□□ 1.58
TRMT1-212ENST00000588746 NUP160Q12769 1436 aa24.9■■□□□ 1.58
TRMT1-212ENST00000588746 CEP170Q5SW79 1584 aa24.87■■□□□ 1.57
TRMT1-212ENST00000588746 EHMT2Q96KQ7 1210 aa24.86■■□□□ 1.57
TRMT1-212ENST00000588746 KIF21BO75037 1637 aa24.86■■□□□ 1.57
TRMT1-212ENST00000588746 CLASP1Q7Z460 1538 aa24.79■■□□□ 1.56
TRMT1-212ENST00000588746 GOLGA3Q08378 1498 aa24.77■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms