RNA–Protein interactions for RNA: ENST00000588484.1

TNPO2-211, Transcript of transportin 2, humanhuman

TSL 3

Gene TNPO2, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNPO2-211ENST00000588484 NISCHQ9Y2I1 1504 aa24.67■■□□□ 1.54
TNPO2-211ENST00000588484 CCDC180Q9P1Z9 1646 aa21.88■■□□□ 1.09
TNPO2-211ENST00000588484 ABCC9O60706 1549 aa20.99■□□□□ 0.95
TNPO2-211ENST00000588484 ZCCHC6Q5VYS8 1495 aaKnown RBP20.63■□□□□ 0.89
TNPO2-211ENST00000588484 MYO15BQ96JP2 1530 aa20.52■□□□□ 0.87
TNPO2-211ENST00000588484 DCAF1Q9Y4B6 1507 aa20.51■□□□□ 0.87
TNPO2-211ENST00000588484 NACADO15069 1562 aa20.49■□□□□ 0.87
TNPO2-211ENST00000588484 RB1CC1Q8TDY2 1594 aa20.42■□□□□ 0.86
TNPO2-211ENST00000588484 DCAF8L2P0C7V8 631 aa20.37■□□□□ 0.85
TNPO2-211ENST00000588484 UNC13AQ9UPW8 1703 aa19.9■□□□□ 0.78
TNPO2-211ENST00000588484 SCRIBQ14160 1630 aa19.87■□□□□ 0.77
TNPO2-211ENST00000588484 BICRAQ9NZM4 1560 aa19.73■□□□□ 0.75
TNPO2-211ENST00000588484 SHROOM4Q9ULL8 1493 aa19.71■□□□□ 0.75
TNPO2-211ENST00000588484 PABPN1Q86U42 306 aaKnown RBP eCLIP19.61■□□□□ 0.73
TNPO2-211ENST00000588484 EIF4G1Q04637 1599 aaKnown RBP19.21■□□□□ 0.67
TNPO2-211ENST00000588484 BAZ1AQ9NRL2 1556 aaPredicted RBP19.14■□□□□ 0.65
TNPO2-211ENST00000588484 CECR2Q9BXF3 1484 aa19.11■□□□□ 0.65
TNPO2-211ENST00000588484 SMARCA4P51532 1647 aa19.08■□□□□ 0.65
TNPO2-211ENST00000588484 CC2D2AQ9P2K1 1620 aa19.04■□□□□ 0.64
TNPO2-211ENST00000588484 MROH2BQ7Z745 1585 aa18.98■□□□□ 0.63
TNPO2-211ENST00000588484 SMARCA2P51531 1590 aa18.94■□□□□ 0.62
TNPO2-211ENST00000588484 PEG3Q9GZU2 1588 aa18.94■□□□□ 0.62
TNPO2-211ENST00000588484 DNAJC5BQ9UF47 199 aa18.92■□□□□ 0.62
TNPO2-211ENST00000588484 ATAD2BQ9ULI0 1458 aa18.9■□□□□ 0.62
TNPO2-211ENST00000588484 RSF1Q96T23 1441 aaPredicted RBP18.88■□□□□ 0.61
TNPO2-211ENST00000588484 NCAPD3P42695 1498 aa18.87■□□□□ 0.61
TNPO2-211ENST00000588484 HMGXB3Q12766 1538 aa18.84■□□□□ 0.61
TNPO2-211ENST00000588484 WIZO95785 1651 aa18.78■□□□□ 0.6
TNPO2-211ENST00000588484 BAZ1BQ9UIG0 1483 aaKnown RBP18.77■□□□□ 0.59
TNPO2-211ENST00000588484 TOP2AP11388 1531 aaKnown RBP18.67■□□□□ 0.58
TNPO2-211ENST00000588484 SUPT5HO00267 1087 aaKnown RBP18.54■□□□□ 0.56
TNPO2-211ENST00000588484 CCDC88BA6NC98 1476 aa18.39■□□□□ 0.54
TNPO2-211ENST00000588484 LAMC3Q9Y6N6 1575 aa18.35■□□□□ 0.53
TNPO2-211ENST00000588484 CADPSQ9ULU8 1353 aa18.32■□□□□ 0.52
TNPO2-211ENST00000588484 CFTRP13569 1480 aa18.28■□□□□ 0.52
TNPO2-211ENST00000588484 NESP48681 1621 aa18.23■□□□□ 0.51
TNPO2-211ENST00000588484 PDS5BQ9NTI5 1447 aa18.21■□□□□ 0.51
TNPO2-211ENST00000588484 PRDM2Q13029 1718 aa18.2■□□□□ 0.5
TNPO2-211ENST00000588484 ERCC6Q03468 1493 aa18.12■□□□□ 0.49
TNPO2-211ENST00000588484 FANCD2Q9BXW9 1451 aa18.1■□□□□ 0.49
TNPO2-211ENST00000588484 CEP164Q9UPV0 1460 aa18.07■□□□□ 0.48
TNPO2-211ENST00000588484 KIF21AQ7Z4S6 1674 aa18.06■□□□□ 0.48
TNPO2-211ENST00000588484 MRC2Q9UBG0 1479 aa17.98■□□□□ 0.47
TNPO2-211ENST00000588484 THOC2Q8NI27 1593 aaKnown RBP17.96■□□□□ 0.47
TNPO2-211ENST00000588484 ABCC8Q09428 1581 aa17.94■□□□□ 0.46
TNPO2-211ENST00000588484 WDR62O43379 1518 aa17.93■□□□□ 0.46
TNPO2-211ENST00000588484 CUX2O14529 1486 aa17.88■□□□□ 0.45
TNPO2-211ENST00000588484 URB2Q14146 1524 aaKnown RBP17.88■□□□□ 0.45
TNPO2-211ENST00000588484 DNMBPQ6XZF7 1577 aa17.87■□□□□ 0.45
TNPO2-211ENST00000588484 TOPBP1Q92547 1522 aa17.84■□□□□ 0.45
TNPO2-211ENST00000588484 WRNQ14191 1432 aaPredicted RBP eCLIP17.81■□□□□ 0.44
TNPO2-211ENST00000588484 CUX1P39880 1505 aa17.8■□□□□ 0.44
TNPO2-211ENST00000588484 BIVM-ERCC5R4GMW8 1640 aa17.77■□□□□ 0.44
TNPO2-211ENST00000588484 TOP2BQ02880 1626 aa17.76■□□□□ 0.43
TNPO2-211ENST00000588484 SYNJ1O43426 1573 aa17.72■□□□□ 0.43
TNPO2-211ENST00000588484 POLA1P09884 1462 aaPredicted RBP17.7■□□□□ 0.42
TNPO2-211ENST00000588484 FGD5Q6ZNL6 1462 aa17.7■□□□□ 0.42
TNPO2-211ENST00000588484 IFT140Q96RY7 1462 aa17.69■□□□□ 0.42
TNPO2-211ENST00000588484 SOGA1O94964 1423 aa17.64■□□□□ 0.41
TNPO2-211ENST00000588484 WDR97A6NE52 1622 aa17.62■□□□□ 0.41
TNPO2-211ENST00000588484 TARBP1Q13395 1621 aaKnown RBP17.62■□□□□ 0.41
TNPO2-211ENST00000588484 ABCA10Q8WWZ4 1543 aa17.58■□□□□ 0.41
TNPO2-211ENST00000588484 RAD54L2Q9Y4B4 1467 aa17.57■□□□□ 0.4
TNPO2-211ENST00000588484 TRIM41Q8WV44 630 aa17.56■□□□□ 0.4
TNPO2-211ENST00000588484 CHIC1Q5VXU3 224 aa17.51■□□□□ 0.39
TNPO2-211ENST00000588484 EIF4G3O43432 1585 aaKnown RBP17.5■□□□□ 0.39
TNPO2-211ENST00000588484 ZNF608Q9ULD9 1512 aaPredicted RBP17.5■□□□□ 0.39
TNPO2-211ENST00000588484 ABCA5Q8WWZ7 1642 aa17.48■□□□□ 0.39
TNPO2-211ENST00000588484 GAPVD1Q14C86 1478 aa17.45■□□□□ 0.38
TNPO2-211ENST00000588484 TDRD9Q8NDG6 1382 aaKnown RBP17.45■□□□□ 0.38
TNPO2-211ENST00000588484 KIF27Q86VH2 1401 aa17.45■□□□□ 0.38
TNPO2-211ENST00000588484 AQRO60306 1485 aaKnown RBP eCLIP17.44■□□□□ 0.381e-7■■■□□ 18.2
TNPO2-211ENST00000588484 GRIN2BQ13224 1484 aa17.43■□□□□ 0.38
TNPO2-211ENST00000588484 PBRM1Q86U86 1689 aa17.4■□□□□ 0.38
TNPO2-211ENST00000588484 ERICH3Q5RHP9 1530 aa17.4■□□□□ 0.38
TNPO2-211ENST00000588484 MAGI1Q96QZ7 1491 aaPredicted RBP17.37■□□□□ 0.37
TNPO2-211ENST00000588484 EEA1Q15075 1411 aa17.37■□□□□ 0.37
TNPO2-211ENST00000588484 SNAPC4Q5SXM2 1469 aa17.33■□□□□ 0.37
TNPO2-211ENST00000588484 CUL7Q14999 1698 aa17.31■□□□□ 0.36
TNPO2-211ENST00000588484 IGF1RP08069 1367 aa17.29■□□□□ 0.36
TNPO2-211ENST00000588484 ADAMTS12P58397 1594 aa17.29■□□□□ 0.36
TNPO2-211ENST00000588484 FHAD1B1AJZ9 1412 aa17.29■□□□□ 0.36
TNPO2-211ENST00000588484 SYNJ2O15056 1496 aa17.28■□□□□ 0.36
TNPO2-211ENST00000588484 RUSC2Q8N2Y8 1516 aa17.26■□□□□ 0.35
TNPO2-211ENST00000588484 CARMIL1Q5VZK9 1371 aa17.21■□□□□ 0.35
TNPO2-211ENST00000588484 CHMP7Q8WUX9 453 aaPredicted RBP17.21■□□□□ 0.35
TNPO2-211ENST00000588484 CSRNP3Q8WYN3 585 aa17.2■□□□□ 0.34
TNPO2-211ENST00000588484 CHD1O14646 1710 aa17.2■□□□□ 0.34
TNPO2-211ENST00000588484 GRIN2AQ12879 1464 aa17.19■□□□□ 0.34
TNPO2-211ENST00000588484 PRXQ9BXM0 1461 aa17.18■□□□□ 0.34
TNPO2-211ENST00000588484 RAPGEF2Q9Y4G8 1499 aa17.17■□□□□ 0.34
TNPO2-211ENST00000588484 FBLN2P98095 1184 aa17.15■□□□□ 0.34
TNPO2-211ENST00000588484 OSCARQ8IYS5 282 aa17.13■□□□□ 0.33
TNPO2-211ENST00000588484 NUP160Q12769 1436 aa17.12■□□□□ 0.33
TNPO2-211ENST00000588484 KIF21BO75037 1637 aa17.11■□□□□ 0.33
TNPO2-211ENST00000588484 FAM9AQ8IZU1 332 aaPredicted RBP17.09■□□□□ 0.33
TNPO2-211ENST00000588484 CEP170Q5SW79 1584 aa17.06■□□□□ 0.32
TNPO2-211ENST00000588484 CLASP1Q7Z460 1538 aa17.06■□□□□ 0.32
TNPO2-211ENST00000588484 KIAA0586Q9BVV6 1533 aa17.03■□□□□ 0.32
TNPO2-211ENST00000588484 GOLGA3Q08378 1498 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms