RNA–Protein interactions for RNA: ENST00000588329.5

RAD23A-204, Transcript of RAD23 homolog A, nucleotide excision repair protein, humanhuman

TSL 5

Gene RAD23A, Length 1,034 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD23A-204ENST00000588329 NISCHQ9Y2I1 1504 aa44.22■■■■■ 4.67
RAD23A-204ENST00000588329 CCDC180Q9P1Z9 1646 aa39.4■■■■□ 3.9
RAD23A-204ENST00000588329 ABCC9O60706 1549 aa39.36■■■■□ 3.89
RAD23A-204ENST00000588329 DCAF8L2P0C7V8 631 aa37.54■■■■□ 3.6
RAD23A-204ENST00000588329 DNAJC5BQ9UF47 199 aa37.48■■■■□ 3.59
RAD23A-204ENST00000588329 RB1CC1Q8TDY2 1594 aa37.43■■■■□ 3.58
RAD23A-204ENST00000588329 NACADO15069 1562 aa37.22■■■■□ 3.55
RAD23A-204ENST00000588329 PABPN1Q86U42 306 aaKnown RBP eCLIP36.81■■■■□ 3.48
RAD23A-204ENST00000588329 MYO15BQ96JP2 1530 aa36.7■■■■□ 3.47
RAD23A-204ENST00000588329 ZCCHC6Q5VYS8 1495 aaKnown RBP36.69■■■■□ 3.46
RAD23A-204ENST00000588329 UNC13AQ9UPW8 1703 aa36.58■■■■□ 3.45
RAD23A-204ENST00000588329 DCAF1Q9Y4B6 1507 aa36.4■■■■□ 3.42
RAD23A-204ENST00000588329 BICRAQ9NZM4 1560 aa36.35■■■■□ 3.41
RAD23A-204ENST00000588329 SCRIBQ14160 1630 aa36.16■■■■□ 3.38
RAD23A-204ENST00000588329 SHROOM4Q9ULL8 1493 aa35.7■■■■□ 3.31
RAD23A-204ENST00000588329 CC2D2AQ9P2K1 1620 aa35.53■■■■□ 3.28
RAD23A-204ENST00000588329 CECR2Q9BXF3 1484 aa35.47■■■■□ 3.27
RAD23A-204ENST00000588329 EIF4G1Q04637 1599 aaKnown RBP35.45■■■■□ 3.27
RAD23A-204ENST00000588329 DNAJC5Q9H3Z4 198 aa34.88■■■■□ 3.17
RAD23A-204ENST00000588329 SMARCA4P51532 1647 aa34.42■■■■□ 3.1
RAD23A-204ENST00000588329 ATAD2BQ9ULI0 1458 aa34.39■■■■□ 3.1
RAD23A-204ENST00000588329 NCAPD3P42695 1498 aa34.39■■■■□ 3.1
RAD23A-204ENST00000588329 BAZ1AQ9NRL2 1556 aaPredicted RBP34.28■■■■□ 3.08
RAD23A-204ENST00000588329 SMARCA2P51531 1590 aa34.25■■■■□ 3.07
RAD23A-204ENST00000588329 MROH2BQ7Z745 1585 aa34.15■■■■□ 3.06
RAD23A-204ENST00000588329 CUX2O14529 1486 aa34.14■■■■□ 3.06
RAD23A-204ENST00000588329 HMGXB3Q12766 1538 aa34.12■■■■□ 3.05
RAD23A-204ENST00000588329 BAZ1BQ9UIG0 1483 aaKnown RBP34.11■■■■□ 3.05
RAD23A-204ENST00000588329 PEG3Q9GZU2 1588 aa33.97■■■■□ 3.03
RAD23A-204ENST00000588329 ERCC6Q03468 1493 aa33.96■■■■□ 3.03
RAD23A-204ENST00000588329 NESP48681 1621 aa33.9■■■■□ 3.02
RAD23A-204ENST00000588329 WIZO95785 1651 aa33.76■■■□□ 2.99
RAD23A-204ENST00000588329 RSF1Q96T23 1441 aaPredicted RBP33.56■■■□□ 2.96
RAD23A-204ENST00000588329 LAMC3Q9Y6N6 1575 aa33.54■■■□□ 2.96
RAD23A-204ENST00000588329 THOC2Q8NI27 1593 aaKnown RBP33.46■■■□□ 2.95
RAD23A-204ENST00000588329 CADPSQ9ULU8 1353 aa33.43■■■□□ 2.94
RAD23A-204ENST00000588329 PDS5BQ9NTI5 1447 aa33.41■■■□□ 2.94
RAD23A-204ENST00000588329 KIF21AQ7Z4S6 1674 aa33.38■■■□□ 2.93
RAD23A-204ENST00000588329 TOP2AP11388 1531 aaKnown RBP33.28■■■□□ 2.92
RAD23A-204ENST00000588329 MRC2Q9UBG0 1479 aa33.11■■■□□ 2.89
RAD23A-204ENST00000588329 TRIM41Q8WV44 630 aa33.1■■■□□ 2.89
RAD23A-204ENST00000588329 CFTRP13569 1480 aa33.07■■■□□ 2.88
RAD23A-204ENST00000588329 FANCD2Q9BXW9 1451 aa33.07■■■□□ 2.88
RAD23A-204ENST00000588329 CEP164Q9UPV0 1460 aa33.05■■■□□ 2.88
RAD23A-204ENST00000588329 CCDC88BA6NC98 1476 aa32.98■■■□□ 2.87
RAD23A-204ENST00000588329 WDR62O43379 1518 aa32.96■■■□□ 2.87
RAD23A-204ENST00000588329 URB2Q14146 1524 aaKnown RBP32.77■■■□□ 2.84
RAD23A-204ENST00000588329 PRDM2Q13029 1718 aa32.67■■■□□ 2.82
RAD23A-204ENST00000588329 SUPT5HO00267 1087 aaKnown RBP32.58■■■□□ 2.81
RAD23A-204ENST00000588329 TOPBP1Q92547 1522 aa32.46■■■□□ 2.79
RAD23A-204ENST00000588329 OSCARQ8IYS5 282 aa32.39■■■□□ 2.78
RAD23A-204ENST00000588329 ZNF608Q9ULD9 1512 aaPredicted RBP32.36■■■□□ 2.77
RAD23A-204ENST00000588329 IFT140Q96RY7 1462 aa32.35■■■□□ 2.77
RAD23A-204ENST00000588329 DNMBPQ6XZF7 1577 aa32.33■■■□□ 2.77
RAD23A-204ENST00000588329 ABCC8Q09428 1581 aa32.32■■■□□ 2.76
RAD23A-204ENST00000588329 RIMBP3CA6NJZ7 1639 aa32.22■■■□□ 2.75
RAD23A-204ENST00000588329 RIMBP3BA6NNM3 1639 aa32.22■■■□□ 2.75
RAD23A-204ENST00000588329 RIMBP3Q9UFD9 1639 aa32.22■■■□□ 2.75
RAD23A-204ENST00000588329 POLA1P09884 1462 aaPredicted RBP32.16■■■□□ 2.74
RAD23A-204ENST00000588329 AQRO60306 1485 aaKnown RBP eCLIP32.15■■■□□ 2.747e-7■■■■■ 30.9
RAD23A-204ENST00000588329 RAD54L2Q9Y4B4 1467 aa32.13■■■□□ 2.73
RAD23A-204ENST00000588329 EIF4G3O43432 1585 aaKnown RBP32.12■■■□□ 2.73
RAD23A-204ENST00000588329 TARBP1Q13395 1621 aaKnown RBP32.1■■■□□ 2.73
RAD23A-204ENST00000588329 SOGA1O94964 1423 aa32.07■■■□□ 2.72
RAD23A-204ENST00000588329 CUX1P39880 1505 aa32.05■■■□□ 2.72
RAD23A-204ENST00000588329 FGD5Q6ZNL6 1462 aa32.04■■■□□ 2.72
RAD23A-204ENST00000588329 TDRD9Q8NDG6 1382 aaKnown RBP32.03■■■□□ 2.72
RAD23A-204ENST00000588329 FBLN2P98095 1184 aa32■■■□□ 2.71
RAD23A-204ENST00000588329 ARHGEF11O15085 1522 aa31.99■■■□□ 2.71
RAD23A-204ENST00000588329 CHD1O14646 1710 aa31.83■■■□□ 2.69
RAD23A-204ENST00000588329 SNAPC4Q5SXM2 1469 aa31.78■■■□□ 2.68
RAD23A-204ENST00000588329 CYB5RLQ6IPT4 315 aa31.71■■■□□ 2.67
RAD23A-204ENST00000588329 CHMP7Q8WUX9 453 aaPredicted RBP31.71■■■□□ 2.67
RAD23A-204ENST00000588329 GRIN2BQ13224 1484 aa31.69■■■□□ 2.66
RAD23A-204ENST00000588329 WDR97A6NE52 1622 aa31.66■■■□□ 2.66
RAD23A-204ENST00000588329 WRNQ14191 1432 aaPredicted RBP eCLIP31.66■■■□□ 2.66
RAD23A-204ENST00000588329 GAPVD1Q14C86 1478 aa31.65■■■□□ 2.66
RAD23A-204ENST00000588329 ARAP1Q96P48 1450 aa31.64■■■□□ 2.66
RAD23A-204ENST00000588329 SYNJ1O43426 1573 aa31.61■■■□□ 2.65
RAD23A-204ENST00000588329 ABCA10Q8WWZ4 1543 aa31.61■■■□□ 2.65
RAD23A-204ENST00000588329 MAGI1Q96QZ7 1491 aaPredicted RBP31.6■■■□□ 2.65
RAD23A-204ENST00000588329 TRHP20396 242 aaPredicted RBP31.59■■■□□ 2.65
RAD23A-204ENST00000588329 PBRM1Q86U86 1689 aa31.56■■■□□ 2.64
RAD23A-204ENST00000588329 TOP2BQ02880 1626 aa31.56■■■□□ 2.64
RAD23A-204ENST00000588329 SYNJ2O15056 1496 aa31.53■■■□□ 2.64
RAD23A-204ENST00000588329 BIVM-ERCC5R4GMW8 1640 aa31.53■■■□□ 2.64
RAD23A-204ENST00000588329 ABCA5Q8WWZ7 1642 aa31.52■■■□□ 2.64
RAD23A-204ENST00000588329 CLASP1Q7Z460 1538 aa31.42■■■□□ 2.62
RAD23A-204ENST00000588329 GRIN2AQ12879 1464 aa31.29■■■□□ 2.6
RAD23A-204ENST00000588329 ADAMTS12P58397 1594 aa31.29■■■□□ 2.6
RAD23A-204ENST00000588329 FHAD1B1AJZ9 1412 aa31.24■■■□□ 2.59
RAD23A-204ENST00000588329 ERICH3Q5RHP9 1530 aa31.2■■■□□ 2.59
RAD23A-204ENST00000588329 CEP170Q5SW79 1584 aa31.17■■■□□ 2.58
RAD23A-204ENST00000588329 AEBP2Q6ZN18 517 aaPredicted RBP31.17■■■□□ 2.58
RAD23A-204ENST00000588329 NUP160Q12769 1436 aa31.13■■■□□ 2.57
RAD23A-204ENST00000588329 ERCC6L2Q5T890 1561 aa31.09■■■□□ 2.57
RAD23A-204ENST00000588329 KIF27Q86VH2 1401 aa31.02■■■□□ 2.56
RAD23A-204ENST00000588329 IGF1RP08069 1367 aa30.99■■■□□ 2.55
RAD23A-204ENST00000588329 JPH4Q96JJ6 628 aa30.93■■■□□ 2.54
RAD23A-204ENST00000588329 PRG4Q92954 1404 aaPredicted RBP30.91■■■□□ 2.54
Retrieved 100 of 20,778 RNA–protein pairs in 257 ms