RNA–Protein interactions for RNA: ENST00000588170.5

GRN-212, Transcript of granulin precursor, humanhuman

TSL 2

Gene GRN, Length 588 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRN-212ENST00000588170 NISCHQ9Y2I1 1504 aa36.48■■■■□ 3.43
GRN-212ENST00000588170 CCDC180Q9P1Z9 1646 aa32.27■■■□□ 2.76
GRN-212ENST00000588170 ABCC9O60706 1549 aa31.63■■■□□ 2.65
GRN-212ENST00000588170 DCAF8L2P0C7V8 631 aa30.57■■■□□ 2.48
GRN-212ENST00000588170 ZCCHC6Q5VYS8 1495 aaKnown RBP30.38■■■□□ 2.45
GRN-212ENST00000588170 RB1CC1Q8TDY2 1594 aa30.37■■■□□ 2.45
GRN-212ENST00000588170 NACADO15069 1562 aa30.36■■■□□ 2.45
GRN-212ENST00000588170 MYO15BQ96JP2 1530 aa30.17■■■□□ 2.42
GRN-212ENST00000588170 DCAF1Q9Y4B6 1507 aa30.11■■■□□ 2.41
GRN-212ENST00000588170 UNC13AQ9UPW8 1703 aa29.75■■■□□ 2.35
GRN-212ENST00000588170 PABPN1Q86U42 306 aaKnown RBP eCLIP29.66■■■□□ 2.34
GRN-212ENST00000588170 SCRIBQ14160 1630 aa29.57■■■□□ 2.32
GRN-212ENST00000588170 BICRAQ9NZM4 1560 aa29.52■■■□□ 2.32
GRN-212ENST00000588170 DNAJC5BQ9UF47 199 aa29.07■■■□□ 2.24
GRN-212ENST00000588170 SHROOM4Q9ULL8 1493 aa29.05■■■□□ 2.24
GRN-212ENST00000588170 EIF4G1Q04637 1599 aaKnown RBP28.7■■■□□ 2.18
GRN-212ENST00000588170 CC2D2AQ9P2K1 1620 aa28.58■■■□□ 2.17
GRN-212ENST00000588170 CECR2Q9BXF3 1484 aa28.48■■■□□ 2.15
GRN-212ENST00000588170 SMARCA4P51532 1647 aa28.25■■■□□ 2.11
GRN-212ENST00000588170 BAZ1AQ9NRL2 1556 aaPredicted RBP28.21■■■□□ 2.11
GRN-212ENST00000588170 MROH2BQ7Z745 1585 aa28.16■■■□□ 2.1
GRN-212ENST00000588170 ATAD2BQ9ULI0 1458 aa28.11■■■□□ 2.09
GRN-212ENST00000588170 NCAPD3P42695 1498 aa28.06■■■□□ 2.08
GRN-212ENST00000588170 SMARCA2P51531 1590 aa28.01■■■□□ 2.07
GRN-212ENST00000588170 PEG3Q9GZU2 1588 aa27.94■■■□□ 2.06
GRN-212ENST00000588170 RSF1Q96T23 1441 aaPredicted RBP27.88■■■□□ 2.05
GRN-212ENST00000588170 HMGXB3Q12766 1538 aa27.87■■■□□ 2.05
GRN-212ENST00000588170 WIZO95785 1651 aa27.85■■■□□ 2.05
GRN-212ENST00000588170 BAZ1BQ9UIG0 1483 aaKnown RBP27.85■■■□□ 2.05
GRN-212ENST00000588170 TOP2AP11388 1531 aaKnown RBP27.49■■□□□ 1.99
GRN-212ENST00000588170 NESP48681 1621 aa27.43■■□□□ 1.98
GRN-212ENST00000588170 SUPT5HO00267 1087 aaKnown RBP27.33■■□□□ 1.97
GRN-212ENST00000588170 CADPSQ9ULU8 1353 aa27.27■■□□□ 1.96
GRN-212ENST00000588170 CCDC88BA6NC98 1476 aa27.25■■□□□ 1.95
GRN-212ENST00000588170 LAMC3Q9Y6N6 1575 aa27.25■■□□□ 1.95
GRN-212ENST00000588170 ERCC6Q03468 1493 aa27.19■■□□□ 1.94
GRN-212ENST00000588170 CFTRP13569 1480 aa27.11■■□□□ 1.93
GRN-212ENST00000588170 PDS5BQ9NTI5 1447 aa27.09■■□□□ 1.93
GRN-212ENST00000588170 KIF21AQ7Z4S6 1674 aa27.05■■□□□ 1.92
GRN-212ENST00000588170 FANCD2Q9BXW9 1451 aa26.94■■□□□ 1.9
GRN-212ENST00000588170 THOC2Q8NI27 1593 aaKnown RBP26.89■■□□□ 1.9
GRN-212ENST00000588170 CEP164Q9UPV0 1460 aa26.87■■□□□ 1.89
GRN-212ENST00000588170 PRDM2Q13029 1718 aa26.84■■□□□ 1.89
GRN-212ENST00000588170 CUX2O14529 1486 aa26.82■■□□□ 1.88
GRN-212ENST00000588170 MRC2Q9UBG0 1479 aa26.81■■□□□ 1.88
GRN-212ENST00000588170 WDR62O43379 1518 aa26.7■■□□□ 1.87
GRN-212ENST00000588170 URB2Q14146 1524 aaKnown RBP26.7■■□□□ 1.86
GRN-212ENST00000588170 TOPBP1Q92547 1522 aa26.53■■□□□ 1.84
GRN-212ENST00000588170 DNAJC5Q9H3Z4 198 aa26.49■■□□□ 1.83
GRN-212ENST00000588170 ABCC8Q09428 1581 aa26.46■■□□□ 1.83
GRN-212ENST00000588170 DNMBPQ6XZF7 1577 aa26.46■■□□□ 1.83
GRN-212ENST00000588170 CUX1P39880 1505 aa26.39■■□□□ 1.82
GRN-212ENST00000588170 POLA1P09884 1462 aaPredicted RBP26.31■■□□□ 1.8
GRN-212ENST00000588170 IFT140Q96RY7 1462 aa26.3■■□□□ 1.8
GRN-212ENST00000588170 ZNF608Q9ULD9 1512 aaPredicted RBP26.26■■□□□ 1.79
GRN-212ENST00000588170 FGD5Q6ZNL6 1462 aa26.26■■□□□ 1.79
GRN-212ENST00000588170 RAD54L2Q9Y4B4 1467 aa26.26■■□□□ 1.79
GRN-212ENST00000588170 SOGA1O94964 1423 aa26.23■■□□□ 1.79
GRN-212ENST00000588170 WRNQ14191 1432 aaPredicted RBP eCLIP26.23■■□□□ 1.79
GRN-212ENST00000588170 TARBP1Q13395 1621 aaKnown RBP26.23■■□□□ 1.79
GRN-212ENST00000588170 SYNJ1O43426 1573 aa26.19■■□□□ 1.78
GRN-212ENST00000588170 TOP2BQ02880 1626 aa26.14■■□□□ 1.78
GRN-212ENST00000588170 AQRO60306 1485 aaKnown RBP eCLIP26.14■■□□□ 1.782e-10■■■■■ 44.6
GRN-212ENST00000588170 BIVM-ERCC5R4GMW8 1640 aa26.13■■□□□ 1.77
GRN-212ENST00000588170 TDRD9Q8NDG6 1382 aaKnown RBP26.12■■□□□ 1.77
GRN-212ENST00000588170 EIF4G3O43432 1585 aaKnown RBP26.07■■□□□ 1.76
GRN-212ENST00000588170 WDR97A6NE52 1622 aa25.99■■□□□ 1.75
GRN-212ENST00000588170 ABCA10Q8WWZ4 1543 aa25.99■■□□□ 1.75
GRN-212ENST00000588170 GAPVD1Q14C86 1478 aa25.91■■□□□ 1.74
GRN-212ENST00000588170 GRIN2BQ13224 1484 aa25.86■■□□□ 1.73
GRN-212ENST00000588170 ABCA5Q8WWZ7 1642 aa25.86■■□□□ 1.73
GRN-212ENST00000588170 SNAPC4Q5SXM2 1469 aa25.84■■□□□ 1.73
GRN-212ENST00000588170 OSCARQ8IYS5 282 aa25.83■■□□□ 1.73
GRN-212ENST00000588170 FBLN2P98095 1184 aa25.82■■□□□ 1.72
GRN-212ENST00000588170 PBRM1Q86U86 1689 aa25.8■■□□□ 1.72
GRN-212ENST00000588170 TRIM41Q8WV44 630 aa25.76■■□□□ 1.71
GRN-212ENST00000588170 CHD1O14646 1710 aa25.75■■□□□ 1.71
GRN-212ENST00000588170 MAGI1Q96QZ7 1491 aaPredicted RBP25.75■■□□□ 1.71
GRN-212ENST00000588170 CHMP7Q8WUX9 453 aaPredicted RBP25.73■■□□□ 1.71
GRN-212ENST00000588170 SYNJ2O15056 1496 aa25.68■■□□□ 1.7
GRN-212ENST00000588170 KIF27Q86VH2 1401 aa25.66■■□□□ 1.7
GRN-212ENST00000588170 ERICH3Q5RHP9 1530 aa25.66■■□□□ 1.7
GRN-212ENST00000588170 IGF1RP08069 1367 aa25.63■■□□□ 1.69
GRN-212ENST00000588170 ADAMTS12P58397 1594 aa25.61■■□□□ 1.69
GRN-212ENST00000588170 RUSC2Q8N2Y8 1516 aa25.59■■□□□ 1.69
GRN-212ENST00000588170 FHAD1B1AJZ9 1412 aa25.59■■□□□ 1.69
GRN-212ENST00000588170 CHIC1Q5VXU3 224 aa25.57■■□□□ 1.68
GRN-212ENST00000588170 GRIN2AQ12879 1464 aa25.53■■□□□ 1.68
GRN-212ENST00000588170 CLASP1Q7Z460 1538 aa25.46■■□□□ 1.67
GRN-212ENST00000588170 CARMIL1Q5VZK9 1371 aa25.44■■□□□ 1.66
GRN-212ENST00000588170 CEP170Q5SW79 1584 aa25.43■■□□□ 1.66
GRN-212ENST00000588170 NUP160Q12769 1436 aa25.42■■□□□ 1.66
GRN-212ENST00000588170 CUL7Q14999 1698 aa25.42■■□□□ 1.66
GRN-212ENST00000588170 RIMBP3CA6NJZ7 1639 aa25.37■■□□□ 1.65
GRN-212ENST00000588170 RIMBP3BA6NNM3 1639 aa25.37■■□□□ 1.65
GRN-212ENST00000588170 RIMBP3Q9UFD9 1639 aa25.37■■□□□ 1.65
GRN-212ENST00000588170 ARHGEF11O15085 1522 aa25.37■■□□□ 1.65
GRN-212ENST00000588170 FAM9AQ8IZU1 332 aaPredicted RBP25.3■■□□□ 1.64
GRN-212ENST00000588170 CSRNP3Q8WYN3 585 aa25.28■■□□□ 1.64
GRN-212ENST00000588170 RAPGEF2Q9Y4G8 1499 aa25.28■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms