RNA–Protein interactions for RNA: ENST00000588143.5

GRN-211, Transcript of granulin precursor, humanhuman

TSL 3

Gene GRN, Length 546 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRN-211ENST00000588143 NISCHQ9Y2I1 1504 aa36.12■■■■□ 3.37
GRN-211ENST00000588143 CCDC180Q9P1Z9 1646 aa31.98■■■□□ 2.71
GRN-211ENST00000588143 ABCC9O60706 1549 aa31.29■■■□□ 2.6
GRN-211ENST00000588143 DCAF8L2P0C7V8 631 aa30.22■■■□□ 2.43
GRN-211ENST00000588143 NACADO15069 1562 aa30.15■■■□□ 2.42
GRN-211ENST00000588143 RB1CC1Q8TDY2 1594 aa30.12■■■□□ 2.41
GRN-211ENST00000588143 ZCCHC6Q5VYS8 1495 aaKnown RBP30.05■■■□□ 2.4
GRN-211ENST00000588143 MYO15BQ96JP2 1530 aa30.03■■■□□ 2.4
GRN-211ENST00000588143 DCAF1Q9Y4B6 1507 aa29.91■■■□□ 2.38
GRN-211ENST00000588143 PABPN1Q86U42 306 aaKnown RBP eCLIP29.34■■■□□ 2.29
GRN-211ENST00000588143 UNC13AQ9UPW8 1703 aa29.33■■■□□ 2.29
GRN-211ENST00000588143 BICRAQ9NZM4 1560 aa29.22■■■□□ 2.27
GRN-211ENST00000588143 SCRIBQ14160 1630 aa29.16■■■□□ 2.26
GRN-211ENST00000588143 SHROOM4Q9ULL8 1493 aa28.95■■■□□ 2.22
GRN-211ENST00000588143 DNAJC5BQ9UF47 199 aa28.82■■■□□ 2.2
GRN-211ENST00000588143 EIF4G1Q04637 1599 aaKnown RBP28.43■■■□□ 2.14
GRN-211ENST00000588143 CC2D2AQ9P2K1 1620 aa28.29■■■□□ 2.12
GRN-211ENST00000588143 CECR2Q9BXF3 1484 aa28.15■■■□□ 2.1
GRN-211ENST00000588143 BAZ1AQ9NRL2 1556 aaPredicted RBP27.95■■■□□ 2.07
GRN-211ENST00000588143 SMARCA4P51532 1647 aa27.94■■■□□ 2.06
GRN-211ENST00000588143 NCAPD3P42695 1498 aa27.89■■■□□ 2.05
GRN-211ENST00000588143 ATAD2BQ9ULI0 1458 aa27.85■■■□□ 2.05
GRN-211ENST00000588143 MROH2BQ7Z745 1585 aa27.81■■■□□ 2.04
GRN-211ENST00000588143 SMARCA2P51531 1590 aa27.79■■■□□ 2.04
GRN-211ENST00000588143 PEG3Q9GZU2 1588 aa27.72■■■□□ 2.03
GRN-211ENST00000588143 HMGXB3Q12766 1538 aa27.64■■■□□ 2.02
GRN-211ENST00000588143 BAZ1BQ9UIG0 1483 aaKnown RBP27.58■■■□□ 2.01
GRN-211ENST00000588143 RSF1Q96T23 1441 aaPredicted RBP27.58■■■□□ 2
GRN-211ENST00000588143 WIZO95785 1651 aa27.46■■□□□ 1.99
GRN-211ENST00000588143 TOP2AP11388 1531 aaKnown RBP27.19■■□□□ 1.94
GRN-211ENST00000588143 NESP48681 1621 aa27.1■■□□□ 1.93
GRN-211ENST00000588143 CADPSQ9ULU8 1353 aa27.08■■□□□ 1.93
GRN-211ENST00000588143 LAMC3Q9Y6N6 1575 aa27.05■■□□□ 1.92
GRN-211ENST00000588143 ERCC6Q03468 1493 aa26.96■■□□□ 1.91
GRN-211ENST00000588143 CCDC88BA6NC98 1476 aa26.94■■□□□ 1.9
GRN-211ENST00000588143 PDS5BQ9NTI5 1447 aa26.94■■□□□ 1.9
GRN-211ENST00000588143 SUPT5HO00267 1087 aaKnown RBP26.92■■□□□ 1.9
GRN-211ENST00000588143 CFTRP13569 1480 aa26.89■■□□□ 1.9
GRN-211ENST00000588143 CUX2O14529 1486 aa26.69■■□□□ 1.86
GRN-211ENST00000588143 FANCD2Q9BXW9 1451 aa26.69■■□□□ 1.86
GRN-211ENST00000588143 KIF21AQ7Z4S6 1674 aa26.68■■□□□ 1.86
GRN-211ENST00000588143 CEP164Q9UPV0 1460 aa26.62■■□□□ 1.85
GRN-211ENST00000588143 THOC2Q8NI27 1593 aaKnown RBP26.6■■□□□ 1.85
GRN-211ENST00000588143 MRC2Q9UBG0 1479 aa26.59■■□□□ 1.85
GRN-211ENST00000588143 PRDM2Q13029 1718 aa26.5■■□□□ 1.83
GRN-211ENST00000588143 WDR62O43379 1518 aa26.48■■□□□ 1.83
GRN-211ENST00000588143 URB2Q14146 1524 aaKnown RBP26.41■■□□□ 1.82
GRN-211ENST00000588143 ABCC8Q09428 1581 aa26.33■■□□□ 1.8
GRN-211ENST00000588143 TOPBP1Q92547 1522 aa26.25■■□□□ 1.79
GRN-211ENST00000588143 DNMBPQ6XZF7 1577 aa26.2■■□□□ 1.79
GRN-211ENST00000588143 IFT140Q96RY7 1462 aa26.11■■□□□ 1.77
GRN-211ENST00000588143 CUX1P39880 1505 aa26.07■■□□□ 1.76
GRN-211ENST00000588143 POLA1P09884 1462 aaPredicted RBP26.04■■□□□ 1.76
GRN-211ENST00000588143 SOGA1O94964 1423 aa26.01■■□□□ 1.75
GRN-211ENST00000588143 FGD5Q6ZNL6 1462 aa25.97■■□□□ 1.75
GRN-211ENST00000588143 ZNF608Q9ULD9 1512 aaPredicted RBP25.96■■□□□ 1.75
GRN-211ENST00000588143 WRNQ14191 1432 aaPredicted RBP eCLIP25.96■■□□□ 1.75
GRN-211ENST00000588143 DNAJC5Q9H3Z4 198 aa25.95■■□□□ 1.74
GRN-211ENST00000588143 TARBP1Q13395 1621 aaKnown RBP25.95■■□□□ 1.74
GRN-211ENST00000588143 RAD54L2Q9Y4B4 1467 aa25.94■■□□□ 1.74
GRN-211ENST00000588143 AQRO60306 1485 aaKnown RBP eCLIP25.86■■□□□ 1.739e-10■■■■■ 33.9
GRN-211ENST00000588143 TOP2BQ02880 1626 aa25.85■■□□□ 1.73
GRN-211ENST00000588143 TDRD9Q8NDG6 1382 aaKnown RBP25.84■■□□□ 1.73
GRN-211ENST00000588143 SYNJ1O43426 1573 aa25.82■■□□□ 1.72
GRN-211ENST00000588143 BIVM-ERCC5R4GMW8 1640 aa25.81■■□□□ 1.72
GRN-211ENST00000588143 EIF4G3O43432 1585 aaKnown RBP25.77■■□□□ 1.72
GRN-211ENST00000588143 ABCA10Q8WWZ4 1543 aa25.76■■□□□ 1.71
GRN-211ENST00000588143 WDR97A6NE52 1622 aa25.75■■□□□ 1.71
GRN-211ENST00000588143 OSCARQ8IYS5 282 aa25.73■■□□□ 1.71
GRN-211ENST00000588143 GAPVD1Q14C86 1478 aa25.66■■□□□ 1.7
GRN-211ENST00000588143 GRIN2BQ13224 1484 aa25.66■■□□□ 1.7
GRN-211ENST00000588143 ABCA5Q8WWZ7 1642 aa25.57■■□□□ 1.68
GRN-211ENST00000588143 MAGI1Q96QZ7 1491 aaPredicted RBP25.57■■□□□ 1.68
GRN-211ENST00000588143 FBLN2P98095 1184 aa25.56■■□□□ 1.68
GRN-211ENST00000588143 SNAPC4Q5SXM2 1469 aa25.55■■□□□ 1.68
GRN-211ENST00000588143 CHMP7Q8WUX9 453 aaPredicted RBP25.54■■□□□ 1.68
GRN-211ENST00000588143 SYNJ2O15056 1496 aa25.47■■□□□ 1.67
GRN-211ENST00000588143 TRIM41Q8WV44 630 aa25.46■■□□□ 1.67
GRN-211ENST00000588143 PBRM1Q86U86 1689 aa25.45■■□□□ 1.67
GRN-211ENST00000588143 ERICH3Q5RHP9 1530 aa25.44■■□□□ 1.66
GRN-211ENST00000588143 KIF27Q86VH2 1401 aa25.44■■□□□ 1.66
GRN-211ENST00000588143 CHD1O14646 1710 aa25.4■■□□□ 1.66
GRN-211ENST00000588143 IGF1RP08069 1367 aa25.4■■□□□ 1.66
GRN-211ENST00000588143 FHAD1B1AJZ9 1412 aa25.39■■□□□ 1.66
GRN-211ENST00000588143 ADAMTS12P58397 1594 aa25.31■■□□□ 1.64
GRN-211ENST00000588143 GRIN2AQ12879 1464 aa25.29■■□□□ 1.64
GRN-211ENST00000588143 CLASP1Q7Z460 1538 aa25.22■■□□□ 1.63
GRN-211ENST00000588143 NUP160Q12769 1436 aa25.21■■□□□ 1.63
GRN-211ENST00000588143 CARMIL1Q5VZK9 1371 aa25.21■■□□□ 1.63
GRN-211ENST00000588143 CHIC1Q5VXU3 224 aa25.21■■□□□ 1.63
GRN-211ENST00000588143 RUSC2Q8N2Y8 1516 aa25.2■■□□□ 1.62
GRN-211ENST00000588143 CUL7Q14999 1698 aa25.15■■□□□ 1.62
GRN-211ENST00000588143 ARHGEF11O15085 1522 aa25.15■■□□□ 1.62
GRN-211ENST00000588143 CEP170Q5SW79 1584 aa25.12■■□□□ 1.61
GRN-211ENST00000588143 RIMBP3CA6NJZ7 1639 aa25.12■■□□□ 1.61
GRN-211ENST00000588143 RIMBP3BA6NNM3 1639 aa25.12■■□□□ 1.61
GRN-211ENST00000588143 RIMBP3Q9UFD9 1639 aa25.12■■□□□ 1.61
GRN-211ENST00000588143 JPH4Q96JJ6 628 aa25.06■■□□□ 1.6
GRN-211ENST00000588143 CSRNP3Q8WYN3 585 aa25.04■■□□□ 1.6
GRN-211ENST00000588143 CYB5RLQ6IPT4 315 aa25.03■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms