RNA–Protein interactions for RNA: ENST00000588094.1

ZNF404-203, Transcript of zinc finger protein 404, humanhuman

TSL 3

Gene ZNF404, Length 631 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF404-203ENST00000588094 NISCHQ9Y2I1 1504 aa23.17■■□□□ 1.3
ZNF404-203ENST00000588094 AEBP2Q6ZN18 517 aaPredicted RBP21.77■■□□□ 1.08
ZNF404-203ENST00000588094 CCDC180Q9P1Z9 1646 aa20.54■□□□□ 0.88
ZNF404-203ENST00000588094 CHIC1Q5VXU3 224 aa20.42■□□□□ 0.86
ZNF404-203ENST00000588094 ABCC9O60706 1549 aa19.71■□□□□ 0.75
ZNF404-203ENST00000588094 ZCCHC6Q5VYS8 1495 aaKnown RBP19.36■□□□□ 0.69
ZNF404-203ENST00000588094 DCAF1Q9Y4B6 1507 aa19.21■□□□□ 0.67
ZNF404-203ENST00000588094 NACADO15069 1562 aa19.2■□□□□ 0.66
ZNF404-203ENST00000588094 MYO15BQ96JP2 1530 aa19.2■□□□□ 0.66
ZNF404-203ENST00000588094 DCAF8L2P0C7V8 631 aa19.15■□□□□ 0.66
ZNF404-203ENST00000588094 RB1CC1Q8TDY2 1594 aa19.15■□□□□ 0.66
ZNF404-203ENST00000588094 UNC13AQ9UPW8 1703 aa18.82■□□□□ 0.6
ZNF404-203ENST00000588094 SCRIBQ14160 1630 aa18.7■□□□□ 0.58
ZNF404-203ENST00000588094 SENP3Q9H4L4 574 aaPredicted RBP18.67■□□□□ 0.58
ZNF404-203ENST00000588094 BICRAQ9NZM4 1560 aa18.57■□□□□ 0.56
ZNF404-203ENST00000588094 PABPN1Q86U42 306 aaKnown RBP eCLIP18.44■□□□□ 0.54
ZNF404-203ENST00000588094 SHROOM4Q9ULL8 1493 aa18.39■□□□□ 0.54
ZNF404-203ENST00000588094 PHF23Q9BUL5 403 aaPredicted RBP18.38■□□□□ 0.53
ZNF404-203ENST00000588094 EIF4G1Q04637 1599 aaKnown RBP18.04■□□□□ 0.48
ZNF404-203ENST00000588094 CECR2Q9BXF3 1484 aa17.99■□□□□ 0.47
ZNF404-203ENST00000588094 BAZ1AQ9NRL2 1556 aaPredicted RBP17.94■□□□□ 0.46
ZNF404-203ENST00000588094 SMARCA4P51532 1647 aa17.94■□□□□ 0.46
ZNF404-203ENST00000588094 CC2D2AQ9P2K1 1620 aa17.9■□□□□ 0.46
ZNF404-203ENST00000588094 MROH2BQ7Z745 1585 aa17.85■□□□□ 0.45
ZNF404-203ENST00000588094 DNAJC5BQ9UF47 199 aa17.83■□□□□ 0.44
ZNF404-203ENST00000588094 PEG3Q9GZU2 1588 aa17.78■□□□□ 0.44
ZNF404-203ENST00000588094 SMARCA2P51531 1590 aa17.75■□□□□ 0.43
ZNF404-203ENST00000588094 RSF1Q96T23 1441 aaPredicted RBP17.73■□□□□ 0.43
ZNF404-203ENST00000588094 ATAD2BQ9ULI0 1458 aa17.73■□□□□ 0.43
ZNF404-203ENST00000588094 WIZO95785 1651 aa17.71■□□□□ 0.42
ZNF404-203ENST00000588094 NCAPD3P42695 1498 aa17.69■□□□□ 0.42
ZNF404-203ENST00000588094 HMGXB3Q12766 1538 aa17.65■□□□□ 0.42
ZNF404-203ENST00000588094 BAZ1BQ9UIG0 1483 aaKnown RBP17.6■□□□□ 0.41
ZNF404-203ENST00000588094 TOP2AP11388 1531 aaKnown RBP17.52■□□□□ 0.39
ZNF404-203ENST00000588094 SUPT5HO00267 1087 aaKnown RBP17.44■□□□□ 0.38
ZNF404-203ENST00000588094 FOXD1Q16676 465 aa17.4■□□□□ 0.38
ZNF404-203ENST00000588094 CCDC88BA6NC98 1476 aa17.29■□□□□ 0.36
ZNF404-203ENST00000588094 LAMC3Q9Y6N6 1575 aa17.2■□□□□ 0.34
ZNF404-203ENST00000588094 CADPSQ9ULU8 1353 aa17.17■□□□□ 0.34
ZNF404-203ENST00000588094 PRDM2Q13029 1718 aa17.17■□□□□ 0.34
ZNF404-203ENST00000588094 NESP48681 1621 aa17.16■□□□□ 0.34
ZNF404-203ENST00000588094 CFTRP13569 1480 aa17.15■□□□□ 0.34
ZNF404-203ENST00000588094 KIF21AQ7Z4S6 1674 aa17.04■□□□□ 0.32
ZNF404-203ENST00000588094 PDS5BQ9NTI5 1447 aa17.04■□□□□ 0.32
ZNF404-203ENST00000588094 FANCD2Q9BXW9 1451 aa16.98■□□□□ 0.31
ZNF404-203ENST00000588094 ERCC6Q03468 1493 aa16.97■□□□□ 0.31
ZNF404-203ENST00000588094 CEP164Q9UPV0 1460 aa16.93■□□□□ 0.3
ZNF404-203ENST00000588094 THOC2Q8NI27 1593 aaKnown RBP16.89■□□□□ 0.29
ZNF404-203ENST00000588094 MRC2Q9UBG0 1479 aa16.85■□□□□ 0.29
ZNF404-203ENST00000588094 WDR62O43379 1518 aa16.81■□□□□ 0.28
ZNF404-203ENST00000588094 URB2Q14146 1524 aaKnown RBP16.8■□□□□ 0.28
ZNF404-203ENST00000588094 ABCC8Q09428 1581 aa16.78■□□□□ 0.28
ZNF404-203ENST00000588094 DNMBPQ6XZF7 1577 aa16.77■□□□□ 0.28
ZNF404-203ENST00000588094 TOPBP1Q92547 1522 aa16.75■□□□□ 0.27
ZNF404-203ENST00000588094 CUX1P39880 1505 aa16.74■□□□□ 0.27
ZNF404-203ENST00000588094 CUX2O14529 1486 aa16.72■□□□□ 0.27
ZNF404-203ENST00000588094 WRNQ14191 1432 aaPredicted RBP eCLIP16.71■□□□□ 0.27
ZNF404-203ENST00000588094 BIVM-ERCC5R4GMW8 1640 aa16.71■□□□□ 0.27
ZNF404-203ENST00000588094 TOP2BQ02880 1626 aa16.7■□□□□ 0.26
ZNF404-203ENST00000588094 SYNJ1O43426 1573 aa16.68■□□□□ 0.26
ZNF404-203ENST00000588094 POLA1P09884 1462 aaPredicted RBP16.62■□□□□ 0.25
ZNF404-203ENST00000588094 FGD5Q6ZNL6 1462 aa16.62■□□□□ 0.25
ZNF404-203ENST00000588094 TARBP1Q13395 1621 aaKnown RBP16.58■□□□□ 0.24
ZNF404-203ENST00000588094 IFT140Q96RY7 1462 aa16.56■□□□□ 0.24
ZNF404-203ENST00000588094 SOGA1O94964 1423 aa16.54■□□□□ 0.24
ZNF404-203ENST00000588094 WDR97A6NE52 1622 aa16.54■□□□□ 0.24
ZNF404-203ENST00000588094 RAD54L2Q9Y4B4 1467 aa16.53■□□□□ 0.24
ZNF404-203ENST00000588094 ABCA10Q8WWZ4 1543 aa16.5■□□□□ 0.23
ZNF404-203ENST00000588094 POTEDQ86YR6 584 aa16.49■□□□□ 0.23
ZNF404-203ENST00000588094 TRIM41Q8WV44 630 aa16.48■□□□□ 0.23
ZNF404-203ENST00000588094 ZNF608Q9ULD9 1512 aaPredicted RBP16.46■□□□□ 0.23
ZNF404-203ENST00000588094 EIF4G3O43432 1585 aaKnown RBP16.45■□□□□ 0.22
ZNF404-203ENST00000588094 MSH5O43196 834 aa16.43■□□□□ 0.22
ZNF404-203ENST00000588094 ABCA5Q8WWZ7 1642 aa16.42■□□□□ 0.22
ZNF404-203ENST00000588094 AQRO60306 1485 aaKnown RBP eCLIP16.4■□□□□ 0.22
ZNF404-203ENST00000588094 TDRD9Q8NDG6 1382 aaKnown RBP16.39■□□□□ 0.21
ZNF404-203ENST00000588094 PBRM1Q86U86 1689 aa16.39■□□□□ 0.21
ZNF404-203ENST00000588094 GAPVD1Q14C86 1478 aa16.37■□□□□ 0.21
ZNF404-203ENST00000588094 KIF27Q86VH2 1401 aa16.34■□□□□ 0.21
ZNF404-203ENST00000588094 GRIN2BQ13224 1484 aa16.32■□□□□ 0.2
ZNF404-203ENST00000588094 ERICH3Q5RHP9 1530 aa16.31■□□□□ 0.2
ZNF404-203ENST00000588094 RUSC2Q8N2Y8 1516 aa16.28■□□□□ 0.2
ZNF404-203ENST00000588094 MAGI1Q96QZ7 1491 aaPredicted RBP16.28■□□□□ 0.2
ZNF404-203ENST00000588094 SNAPC4Q5SXM2 1469 aa16.26■□□□□ 0.19
ZNF404-203ENST00000588094 CUL7Q14999 1698 aa16.24■□□□□ 0.19
ZNF404-203ENST00000588094 IGF1RP08069 1367 aa16.24■□□□□ 0.19
ZNF404-203ENST00000588094 CHD1O14646 1710 aa16.23■□□□□ 0.19
ZNF404-203ENST00000588094 ADAMTS12P58397 1594 aa16.23■□□□□ 0.19
ZNF404-203ENST00000588094 EEA1Q15075 1411 aa16.23■□□□□ 0.19
ZNF404-203ENST00000588094 PLPPR3Q6T4P5 718 aa16.21■□□□□ 0.19
ZNF404-203ENST00000588094 PIAS4Q8N2W9 510 aaPredicted RBP16.2■□□□□ 0.18
ZNF404-203ENST00000588094 SYNJ2O15056 1496 aa16.19■□□□□ 0.18
ZNF404-203ENST00000588094 FHAD1B1AJZ9 1412 aa16.19■□□□□ 0.18
ZNF404-203ENST00000588094 CARMIL1Q5VZK9 1371 aa16.14■□□□□ 0.17
ZNF404-203ENST00000588094 CSRNP3Q8WYN3 585 aa16.13■□□□□ 0.17
ZNF404-203ENST00000588094 GRIN2AQ12879 1464 aa16.12■□□□□ 0.17
ZNF404-203ENST00000588094 CHMP7Q8WUX9 453 aaPredicted RBP16.12■□□□□ 0.17
ZNF404-203ENST00000588094 PRXQ9BXM0 1461 aa16.11■□□□□ 0.17
ZNF404-203ENST00000588094 FBLN2P98095 1184 aa16.1■□□□□ 0.17
ZNF404-203ENST00000588094 FAM9AQ8IZU1 332 aaPredicted RBP16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms