RNA–Protein interactions for RNA: ENST00000588036.5

RTN2-205, Transcript of reticulon 2, humanhuman

TSL 4

Gene RTN2, Length 546 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN2-205ENST00000588036 NISCHQ9Y2I1 1504 aa27.37■■□□□ 1.97
RTN2-205ENST00000588036 ABCC9O60706 1549 aa25.37■■□□□ 1.65
RTN2-205ENST00000588036 CCDC180Q9P1Z9 1646 aa24.83■■□□□ 1.57
RTN2-205ENST00000588036 DNAJC5BQ9UF47 199 aa24.33■■□□□ 1.49
RTN2-205ENST00000588036 RB1CC1Q8TDY2 1594 aa23.92■■□□□ 1.42
RTN2-205ENST00000588036 NACADO15069 1562 aa23.63■■□□□ 1.37
RTN2-205ENST00000588036 PABPN1Q86U42 306 aaKnown RBP eCLIP23.51■■□□□ 1.35
RTN2-205ENST00000588036 UNC13AQ9UPW8 1703 aa23.32■■□□□ 1.32
RTN2-205ENST00000588036 DCAF8L2P0C7V8 631 aa23.29■■□□□ 1.32
RTN2-205ENST00000588036 BICRAQ9NZM4 1560 aa23.24■■□□□ 1.31
RTN2-205ENST00000588036 MYO15BQ96JP2 1530 aa23.14■■□□□ 1.3
RTN2-205ENST00000588036 CECR2Q9BXF3 1484 aa22.95■■□□□ 1.26
RTN2-205ENST00000588036 SHROOM4Q9ULL8 1493 aa22.94■■□□□ 1.26
RTN2-205ENST00000588036 CC2D2AQ9P2K1 1620 aa22.9■■□□□ 1.26
RTN2-205ENST00000588036 DNAJC5Q9H3Z4 198 aa22.82■■□□□ 1.24
RTN2-205ENST00000588036 EIF4G1Q04637 1599 aaKnown RBP22.72■■□□□ 1.23
RTN2-205ENST00000588036 DCAF1Q9Y4B6 1507 aa22.62■■□□□ 1.21
RTN2-205ENST00000588036 ZCCHC6Q5VYS8 1495 aaKnown RBP22.57■■□□□ 1.2
RTN2-205ENST00000588036 SCRIBQ14160 1630 aa22.54■■□□□ 1.2
RTN2-205ENST00000588036 CUX2O14529 1486 aa22.17■■□□□ 1.14
RTN2-205ENST00000588036 ERCC6Q03468 1493 aa21.96■■□□□ 1.11
RTN2-205ENST00000588036 NCAPD3P42695 1498 aa21.83■■□□□ 1.09
RTN2-205ENST00000588036 ATAD2BQ9ULI0 1458 aa21.66■■□□□ 1.06
RTN2-205ENST00000588036 NESP48681 1621 aa21.62■■□□□ 1.05
RTN2-205ENST00000588036 HMGXB3Q12766 1538 aa21.61■■□□□ 1.05
RTN2-205ENST00000588036 SMARCA2P51531 1590 aa21.57■■□□□ 1.04
RTN2-205ENST00000588036 THOC2Q8NI27 1593 aaKnown RBP21.55■■□□□ 1.04
RTN2-205ENST00000588036 TRIM41Q8WV44 630 aa21.51■■□□□ 1.03
RTN2-205ENST00000588036 SMARCA4P51532 1647 aa21.47■■□□□ 1.03
RTN2-205ENST00000588036 LAMC3Q9Y6N6 1575 aa21.41■■□□□ 1.02
RTN2-205ENST00000588036 BAZ1BQ9UIG0 1483 aaKnown RBP21.41■■□□□ 1.02
RTN2-205ENST00000588036 PDS5BQ9NTI5 1447 aa21.32■■□□□ 1
RTN2-205ENST00000588036 KIF21AQ7Z4S6 1674 aa21.31■■□□□ 1
RTN2-205ENST00000588036 PEG3Q9GZU2 1588 aa21.3■■□□□ 1
RTN2-205ENST00000588036 BAZ1AQ9NRL2 1556 aaPredicted RBP21.29■■□□□ 1
RTN2-205ENST00000588036 MRC2Q9UBG0 1479 aa21.17■□□□□ 0.98
RTN2-205ENST00000588036 WDR62O43379 1518 aa21.14■□□□□ 0.97
RTN2-205ENST00000588036 CADPSQ9ULU8 1353 aa21.12■□□□□ 0.97
RTN2-205ENST00000588036 MROH2BQ7Z745 1585 aa21.06■□□□□ 0.96
RTN2-205ENST00000588036 OSCARQ8IYS5 282 aa21.02■□□□□ 0.96
RTN2-205ENST00000588036 CEP164Q9UPV0 1460 aa20.95■□□□□ 0.94
RTN2-205ENST00000588036 FANCD2Q9BXW9 1451 aa20.88■□□□□ 0.93
RTN2-205ENST00000588036 RIMBP3CA6NJZ7 1639 aa20.8■□□□□ 0.92
RTN2-205ENST00000588036 RIMBP3BA6NNM3 1639 aa20.8■□□□□ 0.92
RTN2-205ENST00000588036 RIMBP3Q9UFD9 1639 aa20.8■□□□□ 0.92
RTN2-205ENST00000588036 CFTRP13569 1480 aa20.76■□□□□ 0.91
RTN2-205ENST00000588036 WIZO95785 1651 aa20.75■□□□□ 0.91
RTN2-205ENST00000588036 URB2Q14146 1524 aaKnown RBP20.73■□□□□ 0.91
RTN2-205ENST00000588036 ARHGEF11O15085 1522 aa20.7■□□□□ 0.9
RTN2-205ENST00000588036 IFT140Q96RY7 1462 aa20.57■□□□□ 0.88
RTN2-205ENST00000588036 ZNF608Q9ULD9 1512 aaPredicted RBP20.57■□□□□ 0.88
RTN2-205ENST00000588036 CYB5RLQ6IPT4 315 aa20.55■□□□□ 0.88
RTN2-205ENST00000588036 TRHP20396 242 aaPredicted RBP20.51■□□□□ 0.87
RTN2-205ENST00000588036 TOP2AP11388 1531 aaKnown RBP20.5■□□□□ 0.87
RTN2-205ENST00000588036 ARAP1Q96P48 1450 aa20.46■□□□□ 0.87
RTN2-205ENST00000588036 PRDM2Q13029 1718 aa20.46■□□□□ 0.87
RTN2-205ENST00000588036 RSF1Q96T23 1441 aaPredicted RBP20.43■□□□□ 0.86
RTN2-205ENST00000588036 EIF4G3O43432 1585 aaKnown RBP20.42■□□□□ 0.86
RTN2-205ENST00000588036 TOPBP1Q92547 1522 aa20.42■□□□□ 0.86
RTN2-205ENST00000588036 AEBP2Q6ZN18 517 aaPredicted RBP20.37■□□□□ 0.85
RTN2-205ENST00000588036 CHD1O14646 1710 aa20.36■□□□□ 0.85
RTN2-205ENST00000588036 ABCC8Q09428 1581 aa20.35■□□□□ 0.85
RTN2-205ENST00000588036 AQRO60306 1485 aaKnown RBP eCLIP20.3■□□□□ 0.84
RTN2-205ENST00000588036 DNMBPQ6XZF7 1577 aa20.29■□□□□ 0.84
RTN2-205ENST00000588036 FBLN2P98095 1184 aa20.27■□□□□ 0.84
RTN2-205ENST00000588036 TARBP1Q13395 1621 aaKnown RBP20.27■□□□□ 0.83
RTN2-205ENST00000588036 CCDC88BA6NC98 1476 aa20.25■□□□□ 0.83
RTN2-205ENST00000588036 POLA1P09884 1462 aaPredicted RBP20.17■□□□□ 0.82
RTN2-205ENST00000588036 CLASP1Q7Z460 1538 aa20.16■□□□□ 0.82
RTN2-205ENST00000588036 SYNJ1O43426 1573 aa20.09■□□□□ 0.81
RTN2-205ENST00000588036 SNAPC4Q5SXM2 1469 aa20.09■□□□□ 0.81
RTN2-205ENST00000588036 TDRD9Q8NDG6 1382 aaKnown RBP20.08■□□□□ 0.81
RTN2-205ENST00000588036 RAD54L2Q9Y4B4 1467 aa20.08■□□□□ 0.81
RTN2-205ENST00000588036 WDR97A6NE52 1622 aa20.06■□□□□ 0.8
RTN2-205ENST00000588036 SOGA1O94964 1423 aa20.05■□□□□ 0.8
RTN2-205ENST00000588036 CHMP7Q8WUX9 453 aaPredicted RBP20.05■□□□□ 0.8
RTN2-205ENST00000588036 MAGI1Q96QZ7 1491 aaPredicted RBP20.04■□□□□ 0.8
RTN2-205ENST00000588036 GAPVD1Q14C86 1478 aa19.99■□□□□ 0.79
RTN2-205ENST00000588036 SYNJ2O15056 1496 aa19.98■□□□□ 0.79
RTN2-205ENST00000588036 GRIN2BQ13224 1484 aa19.97■□□□□ 0.79
RTN2-205ENST00000588036 FGD5Q6ZNL6 1462 aa19.94■□□□□ 0.78
RTN2-205ENST00000588036 CUX1P39880 1505 aa19.83■□□□□ 0.77
RTN2-205ENST00000588036 PBRM1Q86U86 1689 aa19.8■□□□□ 0.76
RTN2-205ENST00000588036 ERCC6L2Q5T890 1561 aa19.76■□□□□ 0.75
RTN2-205ENST00000588036 ABCA5Q8WWZ7 1642 aa19.72■□□□□ 0.75
RTN2-205ENST00000588036 ABCA10Q8WWZ4 1543 aa19.71■□□□□ 0.75
RTN2-205ENST00000588036 GRIN2AQ12879 1464 aa19.71■□□□□ 0.75
RTN2-205ENST00000588036 CEP170Q5SW79 1584 aa19.7■□□□□ 0.74
RTN2-205ENST00000588036 KIF13AQ9H1H9 1805 aa19.69■□□□□ 0.74
RTN2-205ENST00000588036 NUP160Q12769 1436 aa19.68■□□□□ 0.74
RTN2-205ENST00000588036 SHROOM2Q13796 1616 aa19.64■□□□□ 0.73
RTN2-205ENST00000588036 ADAMTS12P58397 1594 aa19.61■□□□□ 0.73
RTN2-205ENST00000588036 ABCC10Q5T3U5 1492 aa19.55■□□□□ 0.72
RTN2-205ENST00000588036 FHAD1B1AJZ9 1412 aa19.55■□□□□ 0.72
RTN2-205ENST00000588036 ILDR1Q86SU0 546 aaPredicted RBP19.55■□□□□ 0.72
RTN2-205ENST00000588036 FAM69CQ0P6D2 419 aa19.53■□□□□ 0.72
RTN2-205ENST00000588036 KDM4FA0A1W2PPD8 638 aa19.52■□□□□ 0.72
RTN2-205ENST00000588036 PRG4Q92954 1404 aaPredicted RBP19.51■□□□□ 0.71
RTN2-205ENST00000588036 WRNQ14191 1432 aaPredicted RBP eCLIP19.51■□□□□ 0.71
RTN2-205ENST00000588036 MAPKBP1O60336 1514 aa19.49■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms