RNA–Protein interactions for RNA: ENST00000588019.1

NLE1-204, Transcript of notchless homolog 1, humanhuman

TSL 5

Gene NLE1, Length 1,107 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLE1-204ENST00000588019 NISCHQ9Y2I1 1504 aa37.63■■■■□ 3.61
NLE1-204ENST00000588019 CCDC180Q9P1Z9 1646 aa33.06■■■□□ 2.88
NLE1-204ENST00000588019 ABCC9O60706 1549 aa31.59■■■□□ 2.65
NLE1-204ENST00000588019 ZCCHC6Q5VYS8 1495 aaKnown RBP31.51■■■□□ 2.63
NLE1-204ENST00000588019 DCAF1Q9Y4B6 1507 aa31.19■■■□□ 2.58
NLE1-204ENST00000588019 DCAF8L2P0C7V8 631 aa31.18■■■□□ 2.58
NLE1-204ENST00000588019 MYO15BQ96JP2 1530 aa31.02■■■□□ 2.56
NLE1-204ENST00000588019 NACADO15069 1562 aa30.93■■■□□ 2.54
NLE1-204ENST00000588019 RB1CC1Q8TDY2 1594 aa30.75■■■□□ 2.51
NLE1-204ENST00000588019 SHROOM4Q9ULL8 1493 aa30.25■■■□□ 2.43
NLE1-204ENST00000588019 SCRIBQ14160 1630 aa30.23■■■□□ 2.43
NLE1-204ENST00000588019 UNC13AQ9UPW8 1703 aa29.96■■■□□ 2.39
NLE1-204ENST00000588019 BICRAQ9NZM4 1560 aa29.75■■■□□ 2.35
NLE1-204ENST00000588019 PABPN1Q86U42 306 aaKnown RBP eCLIP29.69■■■□□ 2.34
NLE1-204ENST00000588019 CECR2Q9BXF3 1484 aa29.21■■■□□ 2.27
NLE1-204ENST00000588019 BAZ1AQ9NRL2 1556 aaPredicted RBP29.12■■■□□ 2.25
NLE1-204ENST00000588019 MROH2BQ7Z745 1585 aa29.01■■■□□ 2.23
NLE1-204ENST00000588019 SMARCA4P51532 1647 aa29■■■□□ 2.23
NLE1-204ENST00000588019 RSF1Q96T23 1441 aaPredicted RBP29■■■□□ 2.23
NLE1-204ENST00000588019 EIF4G1Q04637 1599 aaKnown RBP28.92■■■□□ 2.22
NLE1-204ENST00000588019 SUPT5HO00267 1087 aaKnown RBP28.92■■■□□ 2.22
NLE1-204ENST00000588019 PEG3Q9GZU2 1588 aa28.71■■■□□ 2.19
NLE1-204ENST00000588019 WIZO95785 1651 aa28.7■■■□□ 2.19
NLE1-204ENST00000588019 SMARCA2P51531 1590 aa28.68■■■□□ 2.18
NLE1-204ENST00000588019 ATAD2BQ9ULI0 1458 aa28.66■■■□□ 2.18
NLE1-204ENST00000588019 CC2D2AQ9P2K1 1620 aa28.59■■■□□ 2.17
NLE1-204ENST00000588019 NCAPD3P42695 1498 aa28.54■■■□□ 2.16
NLE1-204ENST00000588019 TOP2AP11388 1531 aaKnown RBP28.48■■■□□ 2.15
NLE1-204ENST00000588019 BAZ1BQ9UIG0 1483 aaKnown RBP28.48■■■□□ 2.15
NLE1-204ENST00000588019 HMGXB3Q12766 1538 aa28.45■■■□□ 2.15
NLE1-204ENST00000588019 DNAJC5BQ9UF47 199 aa28.24■■■□□ 2.11
NLE1-204ENST00000588019 CCDC88BA6NC98 1476 aa28.15■■■□□ 2.1
NLE1-204ENST00000588019 CADPSQ9ULU8 1353 aa27.77■■■□□ 2.04
NLE1-204ENST00000588019 CFTRP13569 1480 aa27.76■■■□□ 2.03
NLE1-204ENST00000588019 LAMC3Q9Y6N6 1575 aa27.64■■■□□ 2.01
NLE1-204ENST00000588019 NESP48681 1621 aa27.56■■■□□ 2
NLE1-204ENST00000588019 PRDM2Q13029 1718 aa27.52■■■□□ 2
NLE1-204ENST00000588019 CHIC1Q5VXU3 224 aa27.47■■□□□ 1.99
NLE1-204ENST00000588019 PDS5BQ9NTI5 1447 aa27.47■■□□□ 1.99
NLE1-204ENST00000588019 FANCD2Q9BXW9 1451 aa27.43■■□□□ 1.98
NLE1-204ENST00000588019 ABCC8Q09428 1581 aa27.35■■□□□ 1.97
NLE1-204ENST00000588019 WRNQ14191 1432 aaPredicted RBP eCLIP27.33■■□□□ 1.97
NLE1-204ENST00000588019 CEP164Q9UPV0 1460 aa27.32■■□□□ 1.96
NLE1-204ENST00000588019 TRIM41Q8WV44 630 aa27.3■■□□□ 1.96
NLE1-204ENST00000588019 KIF21AQ7Z4S6 1674 aa27.21■■□□□ 1.95
NLE1-204ENST00000588019 ERCC6Q03468 1493 aa27.19■■□□□ 1.94
NLE1-204ENST00000588019 SYNJ1O43426 1573 aa27.16■■□□□ 1.94
NLE1-204ENST00000588019 CUX1P39880 1505 aa27.16■■□□□ 1.94
NLE1-204ENST00000588019 TOP2BQ02880 1626 aa27.14■■□□□ 1.94
NLE1-204ENST00000588019 BIVM-ERCC5R4GMW8 1640 aa27.12■■□□□ 1.93
NLE1-204ENST00000588019 MRC2Q9UBG0 1479 aa27.11■■□□□ 1.93
NLE1-204ENST00000588019 DNMBPQ6XZF7 1577 aa27.1■■□□□ 1.93
NLE1-204ENST00000588019 URB2Q14146 1524 aaKnown RBP27.07■■□□□ 1.92
NLE1-204ENST00000588019 TOPBP1Q92547 1522 aa27.07■■□□□ 1.92
NLE1-204ENST00000588019 WDR62O43379 1518 aa26.96■■□□□ 1.91
NLE1-204ENST00000588019 FGD5Q6ZNL6 1462 aa26.95■■□□□ 1.91
NLE1-204ENST00000588019 THOC2Q8NI27 1593 aaKnown RBP26.94■■□□□ 1.9
NLE1-204ENST00000588019 POLA1P09884 1462 aaPredicted RBP26.89■■□□□ 1.9
NLE1-204ENST00000588019 SOGA1O94964 1423 aa26.83■■□□□ 1.89
NLE1-204ENST00000588019 EEA1Q15075 1411 aa26.77■■□□□ 1.88
NLE1-204ENST00000588019 RAD54L2Q9Y4B4 1467 aa26.76■■□□□ 1.87
NLE1-204ENST00000588019 ABCA10Q8WWZ4 1543 aa26.74■■□□□ 1.87
NLE1-204ENST00000588019 CUX2O14529 1486 aa26.74■■□□□ 1.87
NLE1-204ENST00000588019 IFT140Q96RY7 1462 aa26.72■■□□□ 1.87
NLE1-204ENST00000588019 KIF27Q86VH2 1401 aa26.72■■□□□ 1.87
NLE1-204ENST00000588019 FAM9AQ8IZU1 332 aaPredicted RBP26.69■■□□□ 1.86
NLE1-204ENST00000588019 TARBP1Q13395 1621 aaKnown RBP26.68■■□□□ 1.86
NLE1-204ENST00000588019 RUSC2Q8N2Y8 1516 aa26.66■■□□□ 1.86
NLE1-204ENST00000588019 WDR97A6NE52 1622 aa26.63■■□□□ 1.85
NLE1-204ENST00000588019 CSRNP3Q8WYN3 585 aa26.61■■□□□ 1.85
NLE1-204ENST00000588019 TDRD9Q8NDG6 1382 aaKnown RBP26.58■■□□□ 1.84
NLE1-204ENST00000588019 GAPVD1Q14C86 1478 aa26.53■■□□□ 1.84
NLE1-204ENST00000588019 ABCA5Q8WWZ7 1642 aa26.52■■□□□ 1.84
NLE1-204ENST00000588019 IGF1RP08069 1367 aa26.49■■□□□ 1.83
NLE1-204ENST00000588019 ZNF608Q9ULD9 1512 aaPredicted RBP26.49■■□□□ 1.83
NLE1-204ENST00000588019 AQRO60306 1485 aaKnown RBP eCLIP26.47■■□□□ 1.837e-7■■■■■ 35.2
NLE1-204ENST00000588019 ERICH3Q5RHP9 1530 aa26.44■■□□□ 1.82
NLE1-204ENST00000588019 GRIN2BQ13224 1484 aa26.42■■□□□ 1.82
NLE1-204ENST00000588019 EIF4G3O43432 1585 aaKnown RBP26.41■■□□□ 1.82
NLE1-204ENST00000588019 PRXQ9BXM0 1461 aa26.38■■□□□ 1.81
NLE1-204ENST00000588019 CARMIL1Q5VZK9 1371 aa26.37■■□□□ 1.81
NLE1-204ENST00000588019 KIF21BO75037 1637 aa26.36■■□□□ 1.81
NLE1-204ENST00000588019 PBRM1Q86U86 1689 aa26.34■■□□□ 1.81
NLE1-204ENST00000588019 CUL7Q14999 1698 aa26.34■■□□□ 1.81
NLE1-204ENST00000588019 LOC105371045A0A1W2PR82 267 aa26.33■■□□□ 1.81
NLE1-204ENST00000588019 GOLGA3Q08378 1498 aa26.31■■□□□ 1.8
NLE1-204ENST00000588019 RAPGEF2Q9Y4G8 1499 aa26.29■■□□□ 1.8
NLE1-204ENST00000588019 FHAD1B1AJZ9 1412 aa26.26■■□□□ 1.79
NLE1-204ENST00000588019 EHMT2Q96KQ7 1210 aa26.26■■□□□ 1.79
NLE1-204ENST00000588019 MAGI1Q96QZ7 1491 aaPredicted RBP26.25■■□□□ 1.79
NLE1-204ENST00000588019 SNAPC4Q5SXM2 1469 aa26.24■■□□□ 1.79
NLE1-204ENST00000588019 ADAMTS12P58397 1594 aa26.21■■□□□ 1.79
NLE1-204ENST00000588019 UBTFP17480 764 aaKnown RBP26.21■■□□□ 1.79
NLE1-204ENST00000588019 TNIKQ9UKE5 1360 aa26.16■■□□□ 1.78
NLE1-204ENST00000588019 SYNJ2O15056 1496 aa26.14■■□□□ 1.78
NLE1-204ENST00000588019 CHMP7Q8WUX9 453 aaPredicted RBP26.11■■□□□ 1.77
NLE1-204ENST00000588019 GRIN2AQ12879 1464 aa26.06■■□□□ 1.76
NLE1-204ENST00000588019 FBLN2P98095 1184 aa26.04■■□□□ 1.76
NLE1-204ENST00000588019 CEP162Q5TB80 1403 aa25.93■■□□□ 1.74
NLE1-204ENST00000588019 NUP160Q12769 1436 aa25.91■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 90.8 ms