RNA–Protein interactions for RNA: ENST00000587799.1

RANBP3-212, Transcript of RAN binding protein 3, humanhuman

TSL 2

Gene RANBP3, Length 403 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP3-212ENST00000587799 NISCHQ9Y2I1 1504 aa23.67■■□□□ 1.38
RANBP3-212ENST00000587799 CCDC180Q9P1Z9 1646 aa21.04■□□□□ 0.96
RANBP3-212ENST00000587799 ABCC9O60706 1549 aa20.25■□□□□ 0.83
RANBP3-212ENST00000587799 ZCCHC6Q5VYS8 1495 aaKnown RBP19.79■□□□□ 0.76
RANBP3-212ENST00000587799 MYO15BQ96JP2 1530 aa19.78■□□□□ 0.76
RANBP3-212ENST00000587799 NACADO15069 1562 aa19.74■□□□□ 0.75
RANBP3-212ENST00000587799 DCAF1Q9Y4B6 1507 aa19.72■□□□□ 0.75
RANBP3-212ENST00000587799 RB1CC1Q8TDY2 1594 aa19.7■□□□□ 0.74
RANBP3-212ENST00000587799 DCAF8L2P0C7V8 631 aa19.47■□□□□ 0.71
RANBP3-212ENST00000587799 UNC13AQ9UPW8 1703 aa19.12■□□□□ 0.65
RANBP3-212ENST00000587799 SHROOM4Q9ULL8 1493 aa19.08■□□□□ 0.64
RANBP3-212ENST00000587799 SCRIBQ14160 1630 aa19.05■□□□□ 0.64
RANBP3-212ENST00000587799 BICRAQ9NZM4 1560 aa19.02■□□□□ 0.64
RANBP3-212ENST00000587799 PABPN1Q86U42 306 aaKnown RBP eCLIP18.87■□□□□ 0.616e-7■□□□□ 11.3
RANBP3-212ENST00000587799 EIF4G1Q04637 1599 aaKnown RBP18.54■□□□□ 0.56
RANBP3-212ENST00000587799 BAZ1AQ9NRL2 1556 aaPredicted RBP18.38■□□□□ 0.53
RANBP3-212ENST00000587799 CC2D2AQ9P2K1 1620 aa18.38■□□□□ 0.53
RANBP3-212ENST00000587799 DNAJC5BQ9UF47 199 aa18.35■□□□□ 0.53
RANBP3-212ENST00000587799 SMARCA4P51532 1647 aa18.32■□□□□ 0.52
RANBP3-212ENST00000587799 CECR2Q9BXF3 1484 aa18.32■□□□□ 0.52
RANBP3-212ENST00000587799 PEG3Q9GZU2 1588 aa18.24■□□□□ 0.51
RANBP3-212ENST00000587799 SMARCA2P51531 1590 aa18.23■□□□□ 0.51
RANBP3-212ENST00000587799 NCAPD3P42695 1498 aa18.2■□□□□ 0.5
RANBP3-212ENST00000587799 ATAD2BQ9ULI0 1458 aa18.18■□□□□ 0.5
RANBP3-212ENST00000587799 MROH2BQ7Z745 1585 aa18.17■□□□□ 0.5
RANBP3-212ENST00000587799 HMGXB3Q12766 1538 aa18.16■□□□□ 0.5
RANBP3-212ENST00000587799 RSF1Q96T23 1441 aaPredicted RBP18.06■□□□□ 0.48
RANBP3-212ENST00000587799 BAZ1BQ9UIG0 1483 aaKnown RBP18.05■□□□□ 0.48
RANBP3-212ENST00000587799 WIZO95785 1651 aa17.95■□□□□ 0.46
RANBP3-212ENST00000587799 TOP2AP11388 1531 aaKnown RBP17.88■□□□□ 0.45
RANBP3-212ENST00000587799 LAMC3Q9Y6N6 1575 aa17.7■□□□□ 0.42
RANBP3-212ENST00000587799 CADPSQ9ULU8 1353 aa17.64■□□□□ 0.41
RANBP3-212ENST00000587799 CCDC88BA6NC98 1476 aa17.6■□□□□ 0.41
RANBP3-212ENST00000587799 CFTRP13569 1480 aa17.6■□□□□ 0.41
RANBP3-212ENST00000587799 PDS5BQ9NTI5 1447 aa17.55■□□□□ 0.4
RANBP3-212ENST00000587799 NESP48681 1621 aa17.55■□□□□ 0.4
RANBP3-212ENST00000587799 SUPT5HO00267 1087 aaKnown RBP17.55■□□□□ 0.4
RANBP3-212ENST00000587799 ERCC6Q03468 1493 aa17.5■□□□□ 0.39
RANBP3-212ENST00000587799 PRDM2Q13029 1718 aa17.46■□□□□ 0.39
RANBP3-212ENST00000587799 FANCD2Q9BXW9 1451 aa17.42■□□□□ 0.38
RANBP3-212ENST00000587799 CEP164Q9UPV0 1460 aa17.4■□□□□ 0.38
RANBP3-212ENST00000587799 KIF21AQ7Z4S6 1674 aa17.39■□□□□ 0.37
RANBP3-212ENST00000587799 CUX2O14529 1486 aa17.37■□□□□ 0.37
RANBP3-212ENST00000587799 THOC2Q8NI27 1593 aaKnown RBP17.36■□□□□ 0.37
RANBP3-212ENST00000587799 MRC2Q9UBG0 1479 aa17.35■□□□□ 0.37
RANBP3-212ENST00000587799 WDR62O43379 1518 aa17.31■□□□□ 0.36
RANBP3-212ENST00000587799 ABCC8Q09428 1581 aa17.27■□□□□ 0.35
RANBP3-212ENST00000587799 URB2Q14146 1524 aaKnown RBP17.2■□□□□ 0.34
RANBP3-212ENST00000587799 DNMBPQ6XZF7 1577 aa17.19■□□□□ 0.34
RANBP3-212ENST00000587799 TOPBP1Q92547 1522 aa17.15■□□□□ 0.34
RANBP3-212ENST00000587799 CUX1P39880 1505 aa17.06■□□□□ 0.32
RANBP3-212ENST00000587799 IFT140Q96RY7 1462 aa17.05■□□□□ 0.32
RANBP3-212ENST00000587799 WRNQ14191 1432 aaPredicted RBP eCLIP17.04■□□□□ 0.32
RANBP3-212ENST00000587799 POLA1P09884 1462 aaPredicted RBP17.02■□□□□ 0.32
RANBP3-212ENST00000587799 TOP2BQ02880 1626 aa17.01■□□□□ 0.31
RANBP3-212ENST00000587799 BIVM-ERCC5R4GMW8 1640 aa17■□□□□ 0.31
RANBP3-212ENST00000587799 WDR97A6NE52 1622 aa16.99■□□□□ 0.31
RANBP3-212ENST00000587799 FGD5Q6ZNL6 1462 aa16.99■□□□□ 0.31
RANBP3-212ENST00000587799 TARBP1Q13395 1621 aaKnown RBP16.96■□□□□ 0.31
RANBP3-212ENST00000587799 SYNJ1O43426 1573 aa16.94■□□□□ 0.3
RANBP3-212ENST00000587799 SOGA1O94964 1423 aa16.93■□□□□ 0.3
RANBP3-212ENST00000587799 ABCA10Q8WWZ4 1543 aa16.9■□□□□ 0.3
RANBP3-212ENST00000587799 RAD54L2Q9Y4B4 1467 aa16.86■□□□□ 0.29
RANBP3-212ENST00000587799 EIF4G3O43432 1585 aaKnown RBP16.85■□□□□ 0.29
RANBP3-212ENST00000587799 ZNF608Q9ULD9 1512 aaPredicted RBP16.85■□□□□ 0.29
RANBP3-212ENST00000587799 ABCA5Q8WWZ7 1642 aa16.79■□□□□ 0.28
RANBP3-212ENST00000587799 AQRO60306 1485 aaKnown RBP eCLIP16.77■□□□□ 0.282e-8■■■■■ 32
RANBP3-212ENST00000587799 GRIN2BQ13224 1484 aa16.77■□□□□ 0.28
RANBP3-212ENST00000587799 GAPVD1Q14C86 1478 aa16.76■□□□□ 0.27
RANBP3-212ENST00000587799 TDRD9Q8NDG6 1382 aaKnown RBP16.76■□□□□ 0.27
RANBP3-212ENST00000587799 MAGI1Q96QZ7 1491 aaPredicted RBP16.74■□□□□ 0.27
RANBP3-212ENST00000587799 ERICH3Q5RHP9 1530 aa16.71■□□□□ 0.27
RANBP3-212ENST00000587799 KIF27Q86VH2 1401 aa16.7■□□□□ 0.26
RANBP3-212ENST00000587799 PBRM1Q86U86 1689 aa16.69■□□□□ 0.26
RANBP3-212ENST00000587799 TRIM41Q8WV44 630 aa16.67■□□□□ 0.26
RANBP3-212ENST00000587799 SNAPC4Q5SXM2 1469 aa16.67■□□□□ 0.26
RANBP3-212ENST00000587799 SYNJ2O15056 1496 aa16.65■□□□□ 0.26
RANBP3-212ENST00000587799 ADAMTS12P58397 1594 aa16.61■□□□□ 0.25
RANBP3-212ENST00000587799 FHAD1B1AJZ9 1412 aa16.61■□□□□ 0.25
RANBP3-212ENST00000587799 CUL7Q14999 1698 aa16.59■□□□□ 0.25
RANBP3-212ENST00000587799 OSCARQ8IYS5 282 aa16.57■□□□□ 0.24
RANBP3-212ENST00000587799 EEA1Q15075 1411 aa16.56■□□□□ 0.24
RANBP3-212ENST00000587799 IGF1RP08069 1367 aa16.56■□□□□ 0.24
RANBP3-212ENST00000587799 CHIC1Q5VXU3 224 aa16.55■□□□□ 0.24
RANBP3-212ENST00000587799 CHD1O14646 1710 aa16.55■□□□□ 0.24
RANBP3-212ENST00000587799 CHMP7Q8WUX9 453 aaPredicted RBP16.54■□□□□ 0.24
RANBP3-212ENST00000587799 GRIN2AQ12879 1464 aa16.54■□□□□ 0.24
RANBP3-212ENST00000587799 DNAJC5Q9H3Z4 198 aa16.52■□□□□ 0.24
RANBP3-212ENST00000587799 NUP160Q12769 1436 aa16.49■□□□□ 0.23
RANBP3-212ENST00000587799 FBLN2P98095 1184 aa16.47■□□□□ 0.23
RANBP3-212ENST00000587799 CARMIL1Q5VZK9 1371 aa16.47■□□□□ 0.23
RANBP3-212ENST00000587799 CLASP1Q7Z460 1538 aa16.46■□□□□ 0.23
RANBP3-212ENST00000587799 RUSC2Q8N2Y8 1516 aa16.43■□□□□ 0.22
RANBP3-212ENST00000587799 PRXQ9BXM0 1461 aa16.42■□□□□ 0.22
RANBP3-212ENST00000587799 RAPGEF2Q9Y4G8 1499 aa16.42■□□□□ 0.22
RANBP3-212ENST00000587799 CEP170Q5SW79 1584 aa16.4■□□□□ 0.22
RANBP3-212ENST00000587799 KIAA0586Q9BVV6 1533 aa16.37■□□□□ 0.21
RANBP3-212ENST00000587799 CSRNP3Q8WYN3 585 aa16.37■□□□□ 0.21
RANBP3-212ENST00000587799 SHROOM2Q13796 1616 aa16.34■□□□□ 0.21
RANBP3-212ENST00000587799 ARHGEF11O15085 1522 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 180.9 ms