RNA–Protein interactions for RNA: ENST00000587623.1

CTDP1-204, Transcript of CTD phosphatase subunit 1, humanhuman

TSL 2

Gene CTDP1, Length 435 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-204ENST00000587623 NISCHQ9Y2I1 1504 aa20.88■□□□□ 0.93
CTDP1-204ENST00000587623 CCDC180Q9P1Z9 1646 aa18.56■□□□□ 0.56
CTDP1-204ENST00000587623 ABCC9O60706 1549 aa18.26■□□□□ 0.51
CTDP1-204ENST00000587623 DCAF8L2P0C7V8 631 aa17.65■□□□□ 0.42
CTDP1-204ENST00000587623 RB1CC1Q8TDY2 1594 aa17.55■□□□□ 0.4
CTDP1-204ENST00000587623 NACADO15069 1562 aa17.51■□□□□ 0.39
CTDP1-204ENST00000587623 ZCCHC6Q5VYS8 1495 aaKnown RBP17.36■□□□□ 0.37
CTDP1-204ENST00000587623 MYO15BQ96JP2 1530 aa17.35■□□□□ 0.37
CTDP1-204ENST00000587623 DCAF1Q9Y4B6 1507 aa17.26■□□□□ 0.35
CTDP1-204ENST00000587623 PABPN1Q86U42 306 aaKnown RBP eCLIP17.08■□□□□ 0.32
CTDP1-204ENST00000587623 UNC13AQ9UPW8 1703 aa17.02■□□□□ 0.32
CTDP1-204ENST00000587623 SCRIBQ14160 1630 aa16.97■□□□□ 0.31
CTDP1-204ENST00000587623 BICRAQ9NZM4 1560 aa16.9■□□□□ 0.3
CTDP1-204ENST00000587623 SHROOM4Q9ULL8 1493 aa16.82■□□□□ 0.28
CTDP1-204ENST00000587623 DNAJC5BQ9UF47 199 aa16.72■□□□□ 0.27
CTDP1-204ENST00000587623 EIF4G1Q04637 1599 aaKnown RBP16.52■□□□□ 0.24
CTDP1-204ENST00000587623 CC2D2AQ9P2K1 1620 aa16.47■□□□□ 0.23
CTDP1-204ENST00000587623 CECR2Q9BXF3 1484 aa16.42■□□□□ 0.22
CTDP1-204ENST00000587623 BAZ1AQ9NRL2 1556 aaPredicted RBP16.22■□□□□ 0.19
CTDP1-204ENST00000587623 SMARCA4P51532 1647 aa16.2■□□□□ 0.18
CTDP1-204ENST00000587623 SMARCA2P51531 1590 aa16.16■□□□□ 0.18
CTDP1-204ENST00000587623 NCAPD3P42695 1498 aa16.14■□□□□ 0.17
CTDP1-204ENST00000587623 ATAD2BQ9ULI0 1458 aa16.14■□□□□ 0.17
CTDP1-204ENST00000587623 MROH2BQ7Z745 1585 aa16.06■□□□□ 0.16
CTDP1-204ENST00000587623 BAZ1BQ9UIG0 1483 aaKnown RBP16.05■□□□□ 0.16
CTDP1-204ENST00000587623 HMGXB3Q12766 1538 aa16.04■□□□□ 0.16
CTDP1-204ENST00000587623 PEG3Q9GZU2 1588 aa16■□□□□ 0.15
CTDP1-204ENST00000587623 WIZO95785 1651 aa15.89■□□□□ 0.13
CTDP1-204ENST00000587623 RSF1Q96T23 1441 aaPredicted RBP15.89■□□□□ 0.13
CTDP1-204ENST00000587623 ERCC6Q03468 1493 aa15.82■□□□□ 0.12
CTDP1-204ENST00000587623 TOP2AP11388 1531 aaKnown RBP15.75■□□□□ 0.11
CTDP1-204ENST00000587623 NESP48681 1621 aa15.74■□□□□ 0.11
CTDP1-204ENST00000587623 LAMC3Q9Y6N6 1575 aa15.73■□□□□ 0.11
CTDP1-204ENST00000587623 CADPSQ9ULU8 1353 aa15.71■□□□□ 0.11
CTDP1-204ENST00000587623 PDS5BQ9NTI5 1447 aa15.7■□□□□ 0.1
CTDP1-204ENST00000587623 CUX2O14529 1486 aa15.6■□□□□ 0.09
CTDP1-204ENST00000587623 SUPT5HO00267 1087 aaKnown RBP15.6■□□□□ 0.09
CTDP1-204ENST00000587623 CCDC88BA6NC98 1476 aa15.57■□□□□ 0.08
CTDP1-204ENST00000587623 CFTRP13569 1480 aa15.56■□□□□ 0.08
CTDP1-204ENST00000587623 KIF21AQ7Z4S6 1674 aa15.54■□□□□ 0.08
CTDP1-204ENST00000587623 CEP164Q9UPV0 1460 aa15.52■□□□□ 0.08
CTDP1-204ENST00000587623 FANCD2Q9BXW9 1451 aa15.52■□□□□ 0.07
CTDP1-204ENST00000587623 MRC2Q9UBG0 1479 aa15.49■□□□□ 0.07
CTDP1-204ENST00000587623 THOC2Q8NI27 1593 aaKnown RBP15.48■□□□□ 0.07
CTDP1-204ENST00000587623 PRDM2Q13029 1718 aa15.41■□□□□ 0.06
CTDP1-204ENST00000587623 WDR62O43379 1518 aa15.38■□□□□ 0.05
CTDP1-204ENST00000587623 URB2Q14146 1524 aaKnown RBP15.31■□□□□ 0.04
CTDP1-204ENST00000587623 ABCC8Q09428 1581 aa15.31■□□□□ 0.04
CTDP1-204ENST00000587623 TOPBP1Q92547 1522 aa15.24■□□□□ 0.03
CTDP1-204ENST00000587623 DNMBPQ6XZF7 1577 aa15.22■□□□□ 0.03
CTDP1-204ENST00000587623 IFT140Q96RY7 1462 aa15.2■□□□□ 0.02
CTDP1-204ENST00000587623 DNAJC5Q9H3Z4 198 aa15.18■□□□□ 0.02
CTDP1-204ENST00000587623 SOGA1O94964 1423 aa15.1■□□□□ 0.01
CTDP1-204ENST00000587623 POLA1P09884 1462 aaPredicted RBP15.1■□□□□ 0.01
CTDP1-204ENST00000587623 CUX1P39880 1505 aa15.08■□□□□ 0.01
CTDP1-204ENST00000587623 FGD5Q6ZNL6 1462 aa15.08■□□□□ 0
CTDP1-204ENST00000587623 ZNF608Q9ULD9 1512 aaPredicted RBP15.07■□□□□ 0
CTDP1-204ENST00000587623 RAD54L2Q9Y4B4 1467 aa15.04■□□□□ -0
CTDP1-204ENST00000587623 WRNQ14191 1432 aaPredicted RBP eCLIP15.04■□□□□ -0
CTDP1-204ENST00000587623 TARBP1Q13395 1621 aaKnown RBP15.03■□□□□ -0
CTDP1-204ENST00000587623 OSCARQ8IYS5 282 aa15.02■□□□□ -0
CTDP1-204ENST00000587623 AQRO60306 1485 aaKnown RBP eCLIP15.01□□□□□ -0.01
CTDP1-204ENST00000587623 TDRD9Q8NDG6 1382 aaKnown RBP15□□□□□ -0.01
CTDP1-204ENST00000587623 EIF4G3O43432 1585 aaKnown RBP15□□□□□ -0.01
CTDP1-204ENST00000587623 FBLN2P98095 1184 aa14.98□□□□□ -0.01
CTDP1-204ENST00000587623 WDR97A6NE52 1622 aa14.96□□□□□ -0.01
CTDP1-204ENST00000587623 TOP2BQ02880 1626 aa14.95□□□□□ -0.02
CTDP1-204ENST00000587623 BIVM-ERCC5R4GMW8 1640 aa14.93□□□□□ -0.02
CTDP1-204ENST00000587623 SYNJ1O43426 1573 aa14.93□□□□□ -0.02
CTDP1-204ENST00000587623 ABCA10Q8WWZ4 1543 aa14.92□□□□□ -0.02
CTDP1-204ENST00000587623 GRIN2BQ13224 1484 aa14.92□□□□□ -0.02
CTDP1-204ENST00000587623 GAPVD1Q14C86 1478 aa14.91□□□□□ -0.02
CTDP1-204ENST00000587623 CHMP7Q8WUX9 453 aaPredicted RBP14.91□□□□□ -0.02
CTDP1-204ENST00000587623 SNAPC4Q5SXM2 1469 aa14.88□□□□□ -0.03
CTDP1-204ENST00000587623 MAGI1Q96QZ7 1491 aaPredicted RBP14.88□□□□□ -0.03
CTDP1-204ENST00000587623 PBRM1Q86U86 1689 aa14.82□□□□□ -0.04
CTDP1-204ENST00000587623 CHD1O14646 1710 aa14.82□□□□□ -0.04
CTDP1-204ENST00000587623 ABCA5Q8WWZ7 1642 aa14.81□□□□□ -0.04
CTDP1-204ENST00000587623 SYNJ2O15056 1496 aa14.81□□□□□ -0.04
CTDP1-204ENST00000587623 KIF27Q86VH2 1401 aa14.77□□□□□ -0.04
CTDP1-204ENST00000587623 TRIM41Q8WV44 630 aa14.76□□□□□ -0.05
CTDP1-204ENST00000587623 ERICH3Q5RHP9 1530 aa14.76□□□□□ -0.05
CTDP1-204ENST00000587623 FHAD1B1AJZ9 1412 aa14.75□□□□□ -0.05
CTDP1-204ENST00000587623 ADAMTS12P58397 1594 aa14.71□□□□□ -0.05
CTDP1-204ENST00000587623 GRIN2AQ12879 1464 aa14.69□□□□□ -0.06
CTDP1-204ENST00000587623 ARHGEF11O15085 1522 aa14.67□□□□□ -0.06
CTDP1-204ENST00000587623 RIMBP3CA6NJZ7 1639 aa14.66□□□□□ -0.06
CTDP1-204ENST00000587623 RIMBP3BA6NNM3 1639 aa14.66□□□□□ -0.06
CTDP1-204ENST00000587623 RIMBP3Q9UFD9 1639 aa14.66□□□□□ -0.06
CTDP1-204ENST00000587623 IGF1RP08069 1367 aa14.65□□□□□ -0.06
CTDP1-204ENST00000587623 CYB5RLQ6IPT4 315 aa14.64□□□□□ -0.07
CTDP1-204ENST00000587623 CLASP1Q7Z460 1538 aa14.64□□□□□ -0.07
CTDP1-204ENST00000587623 CUL7Q14999 1698 aa14.62□□□□□ -0.07
CTDP1-204ENST00000587623 CARMIL1Q5VZK9 1371 aa14.61□□□□□ -0.07
CTDP1-204ENST00000587623 NUP160Q12769 1436 aa14.61□□□□□ -0.07
CTDP1-204ENST00000587623 CEP170Q5SW79 1584 aa14.58□□□□□ -0.08
CTDP1-204ENST00000587623 JPH4Q96JJ6 628 aa14.55□□□□□ -0.08
CTDP1-204ENST00000587623 ARAP1Q96P48 1450 aa14.54□□□□□ -0.08
CTDP1-204ENST00000587623 RUSC2Q8N2Y8 1516 aa14.51□□□□□ -0.09
CTDP1-204ENST00000587623 KIAA0586Q9BVV6 1533 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms