RNA–Protein interactions for RNA: ENST00000587449.1

CELF4-206, Transcript of CUGBP Elav-like family member 4, humanhuman

TSL 3

Gene CELF4, Length 475 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CELF4-206ENST00000587449 NISCHQ9Y2I1 1504 aa28.5■■■□□ 2.15
CELF4-206ENST00000587449 ABCC9O60706 1549 aa26.5■■□□□ 1.83
CELF4-206ENST00000587449 CCDC180Q9P1Z9 1646 aa25.77■■□□□ 1.72
CELF4-206ENST00000587449 DNAJC5BQ9UF47 199 aa25.54■■□□□ 1.68
CELF4-206ENST00000587449 RB1CC1Q8TDY2 1594 aa24.91■■□□□ 1.58
CELF4-206ENST00000587449 NACADO15069 1562 aa24.6■■□□□ 1.53
CELF4-206ENST00000587449 PABPN1Q86U42 306 aaKnown RBP eCLIP24.6■■□□□ 1.53
CELF4-206ENST00000587449 DCAF8L2P0C7V8 631 aa24.32■■□□□ 1.48
CELF4-206ENST00000587449 BICRAQ9NZM4 1560 aa24.22■■□□□ 1.47
CELF4-206ENST00000587449 UNC13AQ9UPW8 1703 aa24.18■■□□□ 1.46
CELF4-206ENST00000587449 MYO15BQ96JP2 1530 aa24.1■■□□□ 1.45
CELF4-206ENST00000587449 CECR2Q9BXF3 1484 aa23.98■■□□□ 1.43
CELF4-206ENST00000587449 DNAJC5Q9H3Z4 198 aa23.97■■□□□ 1.43
CELF4-206ENST00000587449 SHROOM4Q9ULL8 1493 aa23.9■■□□□ 1.42
CELF4-206ENST00000587449 CC2D2AQ9P2K1 1620 aa23.87■■□□□ 1.41
CELF4-206ENST00000587449 EIF4G1Q04637 1599 aaKnown RBP23.69■■□□□ 1.38
CELF4-206ENST00000587449 DCAF1Q9Y4B6 1507 aa23.53■■□□□ 1.36
CELF4-206ENST00000587449 ZCCHC6Q5VYS8 1495 aaKnown RBP23.48■■□□□ 1.35
CELF4-206ENST00000587449 SCRIBQ14160 1630 aa23.44■■□□□ 1.34
CELF4-206ENST00000587449 CUX2O14529 1486 aa23.17■■□□□ 1.3
CELF4-206ENST00000587449 ERCC6Q03468 1493 aa22.93■■□□□ 1.26
CELF4-206ENST00000587449 NCAPD3P42695 1498 aa22.79■■□□□ 1.24
CELF4-206ENST00000587449 ATAD2BQ9ULI0 1458 aa22.6■■□□□ 1.21
CELF4-206ENST00000587449 NESP48681 1621 aa22.57■■□□□ 1.2
CELF4-206ENST00000587449 TRIM41Q8WV44 630 aa22.56■■□□□ 1.2
CELF4-206ENST00000587449 HMGXB3Q12766 1538 aa22.5■■□□□ 1.19
CELF4-206ENST00000587449 SMARCA2P51531 1590 aa22.46■■□□□ 1.19
CELF4-206ENST00000587449 THOC2Q8NI27 1593 aaKnown RBP22.46■■□□□ 1.19
CELF4-206ENST00000587449 SMARCA4P51532 1647 aa22.31■■□□□ 1.16
CELF4-206ENST00000587449 BAZ1BQ9UIG0 1483 aaKnown RBP22.3■■□□□ 1.16
CELF4-206ENST00000587449 LAMC3Q9Y6N6 1575 aa22.29■■□□□ 1.16
CELF4-206ENST00000587449 PDS5BQ9NTI5 1447 aa22.25■■□□□ 1.15
CELF4-206ENST00000587449 PEG3Q9GZU2 1588 aa22.16■■□□□ 1.14
CELF4-206ENST00000587449 BAZ1AQ9NRL2 1556 aaPredicted RBP22.15■■□□□ 1.14
CELF4-206ENST00000587449 KIF21AQ7Z4S6 1674 aa22.14■■□□□ 1.13
CELF4-206ENST00000587449 MRC2Q9UBG0 1479 aa22.08■■□□□ 1.12
CELF4-206ENST00000587449 CADPSQ9ULU8 1353 aa22.06■■□□□ 1.12
CELF4-206ENST00000587449 WDR62O43379 1518 aa22.03■■□□□ 1.12
CELF4-206ENST00000587449 OSCARQ8IYS5 282 aa22.01■■□□□ 1.11
CELF4-206ENST00000587449 MROH2BQ7Z745 1585 aa21.93■■□□□ 1.1
CELF4-206ENST00000587449 CEP164Q9UPV0 1460 aa21.83■■□□□ 1.09
CELF4-206ENST00000587449 FANCD2Q9BXW9 1451 aa21.77■■□□□ 1.07
CELF4-206ENST00000587449 RIMBP3CA6NJZ7 1639 aa21.69■■□□□ 1.06
CELF4-206ENST00000587449 RIMBP3BA6NNM3 1639 aa21.69■■□□□ 1.06
CELF4-206ENST00000587449 RIMBP3Q9UFD9 1639 aa21.69■■□□□ 1.06
CELF4-206ENST00000587449 CFTRP13569 1480 aa21.65■■□□□ 1.06
CELF4-206ENST00000587449 URB2Q14146 1524 aaKnown RBP21.62■■□□□ 1.05
CELF4-206ENST00000587449 ARHGEF11O15085 1522 aa21.61■■□□□ 1.05
CELF4-206ENST00000587449 WIZO95785 1651 aa21.56■■□□□ 1.04
CELF4-206ENST00000587449 CYB5RLQ6IPT4 315 aa21.52■■□□□ 1.04
CELF4-206ENST00000587449 ZNF608Q9ULD9 1512 aaPredicted RBP21.47■■□□□ 1.03
CELF4-206ENST00000587449 TRHP20396 242 aaPredicted RBP21.47■■□□□ 1.03
CELF4-206ENST00000587449 IFT140Q96RY7 1462 aa21.45■■□□□ 1.03
CELF4-206ENST00000587449 ARAP1Q96P48 1450 aa21.38■■□□□ 1.01
CELF4-206ENST00000587449 AEBP2Q6ZN18 517 aaPredicted RBP21.35■■□□□ 1.01
CELF4-206ENST00000587449 TOP2AP11388 1531 aaKnown RBP21.31■■□□□ 1
CELF4-206ENST00000587449 RSF1Q96T23 1441 aaPredicted RBP21.29■■□□□ 1
CELF4-206ENST00000587449 TOPBP1Q92547 1522 aa21.27■■□□□ 1
CELF4-206ENST00000587449 EIF4G3O43432 1585 aaKnown RBP21.25■□□□□ 0.99
CELF4-206ENST00000587449 AQRO60306 1485 aaKnown RBP eCLIP21.2■□□□□ 0.98
CELF4-206ENST00000587449 ABCC8Q09428 1581 aa21.19■□□□□ 0.98
CELF4-206ENST00000587449 FBLN2P98095 1184 aa21.17■□□□□ 0.98
CELF4-206ENST00000587449 CHD1O14646 1710 aa21.14■□□□□ 0.97
CELF4-206ENST00000587449 PRDM2Q13029 1718 aa21.14■□□□□ 0.97
CELF4-206ENST00000587449 DNMBPQ6XZF7 1577 aa21.1■□□□□ 0.97
CELF4-206ENST00000587449 CCDC88BA6NC98 1476 aa21.1■□□□□ 0.97
CELF4-206ENST00000587449 TARBP1Q13395 1621 aaKnown RBP21.1■□□□□ 0.97
CELF4-206ENST00000587449 CLASP1Q7Z460 1538 aa21.02■□□□□ 0.96
CELF4-206ENST00000587449 POLA1P09884 1462 aaPredicted RBP21.01■□□□□ 0.95
CELF4-206ENST00000587449 TDRD9Q8NDG6 1382 aaKnown RBP20.97■□□□□ 0.95
CELF4-206ENST00000587449 SNAPC4Q5SXM2 1469 aa20.94■□□□□ 0.94
CELF4-206ENST00000587449 RAD54L2Q9Y4B4 1467 aa20.94■□□□□ 0.94
CELF4-206ENST00000587449 CHMP7Q8WUX9 453 aaPredicted RBP20.93■□□□□ 0.94
CELF4-206ENST00000587449 SOGA1O94964 1423 aa20.92■□□□□ 0.94
CELF4-206ENST00000587449 SYNJ1O43426 1573 aa20.91■□□□□ 0.94
CELF4-206ENST00000587449 MAGI1Q96QZ7 1491 aaPredicted RBP20.88■□□□□ 0.93
CELF4-206ENST00000587449 GAPVD1Q14C86 1478 aa20.87■□□□□ 0.93
CELF4-206ENST00000587449 WDR97A6NE52 1622 aa20.86■□□□□ 0.93
CELF4-206ENST00000587449 SYNJ2O15056 1496 aa20.83■□□□□ 0.93
CELF4-206ENST00000587449 GRIN2BQ13224 1484 aa20.81■□□□□ 0.92
CELF4-206ENST00000587449 FGD5Q6ZNL6 1462 aa20.77■□□□□ 0.92
CELF4-206ENST00000587449 CUX1P39880 1505 aa20.65■□□□□ 0.9
CELF4-206ENST00000587449 ERCC6L2Q5T890 1561 aa20.61■□□□□ 0.89
CELF4-206ENST00000587449 ILDR1Q86SU0 546 aaPredicted RBP20.54■□□□□ 0.88
CELF4-206ENST00000587449 GRIN2AQ12879 1464 aa20.54■□□□□ 0.88
CELF4-206ENST00000587449 CEP170Q5SW79 1584 aa20.53■□□□□ 0.88
CELF4-206ENST00000587449 PBRM1Q86U86 1689 aa20.53■□□□□ 0.88
CELF4-206ENST00000587449 ABCA10Q8WWZ4 1543 aa20.53■□□□□ 0.88
CELF4-206ENST00000587449 NUP160Q12769 1436 aa20.53■□□□□ 0.88
CELF4-206ENST00000587449 ABCA5Q8WWZ7 1642 aa20.49■□□□□ 0.87
CELF4-206ENST00000587449 KDM4FA0A1W2PPD8 638 aa20.47■□□□□ 0.87
CELF4-206ENST00000587449 KIF13AQ9H1H9 1805 aa20.44■□□□□ 0.86
CELF4-206ENST00000587449 SHROOM2Q13796 1616 aa20.44■□□□□ 0.86
CELF4-206ENST00000587449 FAM69CQ0P6D2 419 aa20.42■□□□□ 0.86
CELF4-206ENST00000587449 ABCC10Q5T3U5 1492 aa20.41■□□□□ 0.86
CELF4-206ENST00000587449 ADAMTS12P58397 1594 aa20.4■□□□□ 0.86
CELF4-206ENST00000587449 FHAD1B1AJZ9 1412 aa20.37■□□□□ 0.85
CELF4-206ENST00000587449 PRG4Q92954 1404 aaPredicted RBP20.36■□□□□ 0.85
CELF4-206ENST00000587449 WRNQ14191 1432 aaPredicted RBP eCLIP20.33■□□□□ 0.84
CELF4-206ENST00000587449 MAPKBP1O60336 1514 aa20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms