RNA–Protein interactions for RNA: ENST00000587390.1

KRT42P-205, Transcript of keratin 42 pseudogene, humanhuman

TSL 4

Gene KRT42P, Length 533 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT42P-205ENST00000587390 NISCHQ9Y2I1 1504 aa28.84■■■□□ 2.21
KRT42P-205ENST00000587390 CCDC180Q9P1Z9 1646 aa25.7■■□□□ 1.71
KRT42P-205ENST00000587390 ABCC9O60706 1549 aa24.97■■□□□ 1.59
KRT42P-205ENST00000587390 ZCCHC6Q5VYS8 1495 aaKnown RBP24.09■■□□□ 1.45
KRT42P-205ENST00000587390 NACADO15069 1562 aa24.06■■□□□ 1.44
KRT42P-205ENST00000587390 RB1CC1Q8TDY2 1594 aa24.03■■□□□ 1.44
KRT42P-205ENST00000587390 MYO15BQ96JP2 1530 aa24.01■■□□□ 1.43
KRT42P-205ENST00000587390 DCAF1Q9Y4B6 1507 aa23.96■■□□□ 1.43
KRT42P-205ENST00000587390 DCAF8L2P0C7V8 631 aa23.86■■□□□ 1.41
KRT42P-205ENST00000587390 UNC13AQ9UPW8 1703 aa23.45■■□□□ 1.34
KRT42P-205ENST00000587390 PABPN1Q86U42 306 aaKnown RBP eCLIP23.32■■□□□ 1.32
KRT42P-205ENST00000587390 SCRIBQ14160 1630 aa23.32■■□□□ 1.32
KRT42P-205ENST00000587390 BICRAQ9NZM4 1560 aa23.18■■□□□ 1.3
KRT42P-205ENST00000587390 SHROOM4Q9ULL8 1493 aa23.17■■□□□ 1.3
KRT42P-205ENST00000587390 DNAJC5BQ9UF47 199 aa23.12■■□□□ 1.29
KRT42P-205ENST00000587390 EIF4G1Q04637 1599 aaKnown RBP22.62■■□□□ 1.21
KRT42P-205ENST00000587390 CC2D2AQ9P2K1 1620 aa22.57■■□□□ 1.2
KRT42P-205ENST00000587390 CECR2Q9BXF3 1484 aa22.5■■□□□ 1.19
KRT42P-205ENST00000587390 BAZ1AQ9NRL2 1556 aaPredicted RBP22.41■■□□□ 1.18
KRT42P-205ENST00000587390 SMARCA4P51532 1647 aa22.36■■□□□ 1.17
KRT42P-205ENST00000587390 SMARCA2P51531 1590 aa22.23■■□□□ 1.15
KRT42P-205ENST00000587390 PEG3Q9GZU2 1588 aa22.18■■□□□ 1.14
KRT42P-205ENST00000587390 MROH2BQ7Z745 1585 aa22.16■■□□□ 1.14
KRT42P-205ENST00000587390 ATAD2BQ9ULI0 1458 aa22.12■■□□□ 1.13
KRT42P-205ENST00000587390 HMGXB3Q12766 1538 aa22.11■■□□□ 1.13
KRT42P-205ENST00000587390 NCAPD3P42695 1498 aa22.11■■□□□ 1.13
KRT42P-205ENST00000587390 BAZ1BQ9UIG0 1483 aaKnown RBP22.02■■□□□ 1.12
KRT42P-205ENST00000587390 RSF1Q96T23 1441 aaPredicted RBP21.97■■□□□ 1.11
KRT42P-205ENST00000587390 WIZO95785 1651 aa21.97■■□□□ 1.11
KRT42P-205ENST00000587390 TOP2AP11388 1531 aaKnown RBP21.82■■□□□ 1.08
KRT42P-205ENST00000587390 ERCC6Q03468 1493 aa21.59■■□□□ 1.05
KRT42P-205ENST00000587390 LAMC3Q9Y6N6 1575 aa21.58■■□□□ 1.05
KRT42P-205ENST00000587390 NESP48681 1621 aa21.52■■□□□ 1.04
KRT42P-205ENST00000587390 SUPT5HO00267 1087 aaKnown RBP21.5■■□□□ 1.03
KRT42P-205ENST00000587390 CUX2O14529 1486 aa21.46■■□□□ 1.03
KRT42P-205ENST00000587390 CADPSQ9ULU8 1353 aa21.46■■□□□ 1.03
KRT42P-205ENST00000587390 CCDC88BA6NC98 1476 aa21.45■■□□□ 1.03
KRT42P-205ENST00000587390 PRDM2Q13029 1718 aa21.44■■□□□ 1.02
KRT42P-205ENST00000587390 PDS5BQ9NTI5 1447 aa21.41■■□□□ 1.02
KRT42P-205ENST00000587390 CFTRP13569 1480 aa21.39■■□□□ 1.02
KRT42P-205ENST00000587390 KIF21AQ7Z4S6 1674 aa21.3■■□□□ 1
KRT42P-205ENST00000587390 THOC2Q8NI27 1593 aaKnown RBP21.23■□□□□ 0.99
KRT42P-205ENST00000587390 CEP164Q9UPV0 1460 aa21.23■□□□□ 0.99
KRT42P-205ENST00000587390 FANCD2Q9BXW9 1451 aa21.22■□□□□ 0.99
KRT42P-205ENST00000587390 MRC2Q9UBG0 1479 aa21.15■□□□□ 0.98
KRT42P-205ENST00000587390 DNAJC5Q9H3Z4 198 aa21.08■□□□□ 0.97
KRT42P-205ENST00000587390 WDR62O43379 1518 aa21.08■□□□□ 0.96
KRT42P-205ENST00000587390 ABCC8Q09428 1581 aa21.04■□□□□ 0.96
KRT42P-205ENST00000587390 DNMBPQ6XZF7 1577 aa20.97■□□□□ 0.95
KRT42P-205ENST00000587390 URB2Q14146 1524 aaKnown RBP20.95■□□□□ 0.94
KRT42P-205ENST00000587390 TOPBP1Q92547 1522 aa20.91■□□□□ 0.94
KRT42P-205ENST00000587390 CUX1P39880 1505 aa20.79■□□□□ 0.92
KRT42P-205ENST00000587390 WRNQ14191 1432 aaPredicted RBP eCLIP20.78■□□□□ 0.92
KRT42P-205ENST00000587390 BIVM-ERCC5R4GMW8 1640 aa20.78■□□□□ 0.92
KRT42P-205ENST00000587390 IFT140Q96RY7 1462 aa20.78■□□□□ 0.92
KRT42P-205ENST00000587390 TOP2BQ02880 1626 aa20.77■□□□□ 0.92
KRT42P-205ENST00000587390 POLA1P09884 1462 aaPredicted RBP20.74■□□□□ 0.91
KRT42P-205ENST00000587390 FGD5Q6ZNL6 1462 aa20.72■□□□□ 0.91
KRT42P-205ENST00000587390 WDR97A6NE52 1622 aa20.71■□□□□ 0.91
KRT42P-205ENST00000587390 SYNJ1O43426 1573 aa20.69■□□□□ 0.9
KRT42P-205ENST00000587390 TARBP1Q13395 1621 aaKnown RBP20.67■□□□□ 0.9
KRT42P-205ENST00000587390 SOGA1O94964 1423 aa20.64■□□□□ 0.89
KRT42P-205ENST00000587390 EIF4G3O43432 1585 aaKnown RBP20.59■□□□□ 0.89
KRT42P-205ENST00000587390 ZNF608Q9ULD9 1512 aaPredicted RBP20.58■□□□□ 0.89
KRT42P-205ENST00000587390 OSCARQ8IYS5 282 aa20.58■□□□□ 0.89
KRT42P-205ENST00000587390 ABCA10Q8WWZ4 1543 aa20.58■□□□□ 0.88
KRT42P-205ENST00000587390 RAD54L2Q9Y4B4 1467 aa20.56■□□□□ 0.88
KRT42P-205ENST00000587390 ABCA5Q8WWZ7 1642 aa20.49■□□□□ 0.87
KRT42P-205ENST00000587390 AQRO60306 1485 aaKnown RBP eCLIP20.48■□□□□ 0.87
KRT42P-205ENST00000587390 PBRM1Q86U86 1689 aa20.48■□□□□ 0.87
KRT42P-205ENST00000587390 GAPVD1Q14C86 1478 aa20.44■□□□□ 0.86
KRT42P-205ENST00000587390 GRIN2BQ13224 1484 aa20.43■□□□□ 0.86
KRT42P-205ENST00000587390 TDRD9Q8NDG6 1382 aaKnown RBP20.43■□□□□ 0.86
KRT42P-205ENST00000587390 MAGI1Q96QZ7 1491 aaPredicted RBP20.4■□□□□ 0.86
KRT42P-205ENST00000587390 TRIM41Q8WV44 630 aa20.38■□□□□ 0.85
KRT42P-205ENST00000587390 ERICH3Q5RHP9 1530 aa20.37■□□□□ 0.85
KRT42P-205ENST00000587390 KIF27Q86VH2 1401 aa20.37■□□□□ 0.85
KRT42P-205ENST00000587390 SNAPC4Q5SXM2 1469 aa20.34■□□□□ 0.85
KRT42P-205ENST00000587390 FBLN2P98095 1184 aa20.32■□□□□ 0.84
KRT42P-205ENST00000587390 CHD1O14646 1710 aa20.3■□□□□ 0.84
KRT42P-205ENST00000587390 CUL7Q14999 1698 aa20.29■□□□□ 0.84
KRT42P-205ENST00000587390 SYNJ2O15056 1496 aa20.29■□□□□ 0.84
KRT42P-205ENST00000587390 ADAMTS12P58397 1594 aa20.29■□□□□ 0.84
KRT42P-205ENST00000587390 CHMP7Q8WUX9 453 aaPredicted RBP20.26■□□□□ 0.83
KRT42P-205ENST00000587390 FHAD1B1AJZ9 1412 aa20.23■□□□□ 0.83
KRT42P-205ENST00000587390 EEA1Q15075 1411 aa20.19■□□□□ 0.82
KRT42P-205ENST00000587390 CHIC1Q5VXU3 224 aa20.19■□□□□ 0.82
KRT42P-205ENST00000587390 GRIN2AQ12879 1464 aa20.16■□□□□ 0.82
KRT42P-205ENST00000587390 ARHGEF11O15085 1522 aa20.15■□□□□ 0.82
KRT42P-205ENST00000587390 RIMBP3CA6NJZ7 1639 aa20.15■□□□□ 0.82
KRT42P-205ENST00000587390 RIMBP3BA6NNM3 1639 aa20.15■□□□□ 0.82
KRT42P-205ENST00000587390 RIMBP3Q9UFD9 1639 aa20.15■□□□□ 0.82
KRT42P-205ENST00000587390 IGF1RP08069 1367 aa20.13■□□□□ 0.81
KRT42P-205ENST00000587390 CARMIL1Q5VZK9 1371 aa20.08■□□□□ 0.8
KRT42P-205ENST00000587390 CLASP1Q7Z460 1538 aa20.07■□□□□ 0.8
KRT42P-205ENST00000587390 RUSC2Q8N2Y8 1516 aa20.06■□□□□ 0.8
KRT42P-205ENST00000587390 NUP160Q12769 1436 aa20.04■□□□□ 0.8
KRT42P-205ENST00000587390 RAPGEF2Q9Y4G8 1499 aa20.04■□□□□ 0.8
KRT42P-205ENST00000587390 CYB5RLQ6IPT4 315 aa20.03■□□□□ 0.8
KRT42P-205ENST00000587390 CEP170Q5SW79 1584 aa20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms