RNA–Protein interactions for RNA: ENST00000587368.1

CHAF1A-204, Transcript of chromatin assembly factor 1 subunit A, humanhuman

TSL 5

Gene CHAF1A, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHAF1A-204ENST00000587368 NISCHQ9Y2I1 1504 aa33.17■■■□□ 2.9
CHAF1A-204ENST00000587368 CCDC180Q9P1Z9 1646 aa29.44■■■□□ 2.3
CHAF1A-204ENST00000587368 ABCC9O60706 1549 aa28.95■■■□□ 2.23
CHAF1A-204ENST00000587368 DCAF8L2P0C7V8 631 aa27.87■■■□□ 2.05
CHAF1A-204ENST00000587368 RB1CC1Q8TDY2 1594 aa27.8■■■□□ 2.04
CHAF1A-204ENST00000587368 NACADO15069 1562 aa27.77■■■□□ 2.04
CHAF1A-204ENST00000587368 ZCCHC6Q5VYS8 1495 aaKnown RBP27.6■■■□□ 2.01
CHAF1A-204ENST00000587368 MYO15BQ96JP2 1530 aa27.59■■■□□ 2.01
CHAF1A-204ENST00000587368 DCAF1Q9Y4B6 1507 aa27.44■■□□□ 1.98
CHAF1A-204ENST00000587368 PABPN1Q86U42 306 aaKnown RBP eCLIP27.1■■□□□ 1.93
CHAF1A-204ENST00000587368 UNC13AQ9UPW8 1703 aa27.04■■□□□ 1.92
CHAF1A-204ENST00000587368 BICRAQ9NZM4 1560 aa26.92■■□□□ 1.9
CHAF1A-204ENST00000587368 SCRIBQ14160 1630 aa26.88■■□□□ 1.89
CHAF1A-204ENST00000587368 SHROOM4Q9ULL8 1493 aa26.68■■□□□ 1.86
CHAF1A-204ENST00000587368 DNAJC5BQ9UF47 199 aa26.65■■□□□ 1.86
CHAF1A-204ENST00000587368 EIF4G1Q04637 1599 aaKnown RBP26.24■■□□□ 1.79
CHAF1A-204ENST00000587368 CC2D2AQ9P2K1 1620 aa26.14■■□□□ 1.78
CHAF1A-204ENST00000587368 CECR2Q9BXF3 1484 aa26.04■■□□□ 1.76
CHAF1A-204ENST00000587368 BAZ1AQ9NRL2 1556 aaPredicted RBP25.71■■□□□ 1.71
CHAF1A-204ENST00000587368 SMARCA4P51532 1647 aa25.7■■□□□ 1.71
CHAF1A-204ENST00000587368 NCAPD3P42695 1498 aa25.66■■□□□ 1.7
CHAF1A-204ENST00000587368 ATAD2BQ9ULI0 1458 aa25.65■■□□□ 1.7
CHAF1A-204ENST00000587368 SMARCA2P51531 1590 aa25.6■■□□□ 1.69
CHAF1A-204ENST00000587368 MROH2BQ7Z745 1585 aa25.55■■□□□ 1.68
CHAF1A-204ENST00000587368 PEG3Q9GZU2 1588 aa25.47■■□□□ 1.67
CHAF1A-204ENST00000587368 HMGXB3Q12766 1538 aa25.47■■□□□ 1.67
CHAF1A-204ENST00000587368 BAZ1BQ9UIG0 1483 aaKnown RBP25.43■■□□□ 1.66
CHAF1A-204ENST00000587368 RSF1Q96T23 1441 aaPredicted RBP25.28■■□□□ 1.64
CHAF1A-204ENST00000587368 WIZO95785 1651 aa25.23■■□□□ 1.63
CHAF1A-204ENST00000587368 NESP48681 1621 aa25.01■■□□□ 1.59
CHAF1A-204ENST00000587368 TOP2AP11388 1531 aaKnown RBP24.99■■□□□ 1.59
CHAF1A-204ENST00000587368 ERCC6Q03468 1493 aa24.99■■□□□ 1.59
CHAF1A-204ENST00000587368 LAMC3Q9Y6N6 1575 aa24.94■■□□□ 1.58
CHAF1A-204ENST00000587368 CADPSQ9ULU8 1353 aa24.93■■□□□ 1.58
CHAF1A-204ENST00000587368 PDS5BQ9NTI5 1447 aa24.85■■□□□ 1.57
CHAF1A-204ENST00000587368 CCDC88BA6NC98 1476 aa24.73■■□□□ 1.55
CHAF1A-204ENST00000587368 CFTRP13569 1480 aa24.73■■□□□ 1.55
CHAF1A-204ENST00000587368 CUX2O14529 1486 aa24.72■■□□□ 1.55
CHAF1A-204ENST00000587368 SUPT5HO00267 1087 aaKnown RBP24.66■■□□□ 1.54
CHAF1A-204ENST00000587368 KIF21AQ7Z4S6 1674 aa24.64■■□□□ 1.53
CHAF1A-204ENST00000587368 FANCD2Q9BXW9 1451 aa24.6■■□□□ 1.53
CHAF1A-204ENST00000587368 THOC2Q8NI27 1593 aaKnown RBP24.59■■□□□ 1.53
CHAF1A-204ENST00000587368 CEP164Q9UPV0 1460 aa24.58■■□□□ 1.52
CHAF1A-204ENST00000587368 MRC2Q9UBG0 1479 aa24.55■■□□□ 1.52
CHAF1A-204ENST00000587368 WDR62O43379 1518 aa24.43■■□□□ 1.5
CHAF1A-204ENST00000587368 PRDM2Q13029 1718 aa24.4■■□□□ 1.5
CHAF1A-204ENST00000587368 URB2Q14146 1524 aaKnown RBP24.33■■□□□ 1.49
CHAF1A-204ENST00000587368 ABCC8Q09428 1581 aa24.23■■□□□ 1.47
CHAF1A-204ENST00000587368 TOPBP1Q92547 1522 aa24.19■■□□□ 1.46
CHAF1A-204ENST00000587368 DNMBPQ6XZF7 1577 aa24.13■■□□□ 1.45
CHAF1A-204ENST00000587368 DNAJC5Q9H3Z4 198 aa24.1■■□□□ 1.45
CHAF1A-204ENST00000587368 IFT140Q96RY7 1462 aa24.08■■□□□ 1.45
CHAF1A-204ENST00000587368 POLA1P09884 1462 aaPredicted RBP23.98■■□□□ 1.43
CHAF1A-204ENST00000587368 CUX1P39880 1505 aa23.96■■□□□ 1.43
CHAF1A-204ENST00000587368 ZNF608Q9ULD9 1512 aaPredicted RBP23.94■■□□□ 1.42
CHAF1A-204ENST00000587368 SOGA1O94964 1423 aa23.93■■□□□ 1.42
CHAF1A-204ENST00000587368 FGD5Q6ZNL6 1462 aa23.91■■□□□ 1.42
CHAF1A-204ENST00000587368 TARBP1Q13395 1621 aaKnown RBP23.88■■□□□ 1.41
CHAF1A-204ENST00000587368 RAD54L2Q9Y4B4 1467 aa23.88■■□□□ 1.41
CHAF1A-204ENST00000587368 WRNQ14191 1432 aaPredicted RBP eCLIP23.84■■□□□ 1.41
CHAF1A-204ENST00000587368 AQRO60306 1485 aaKnown RBP eCLIP23.83■■□□□ 1.413e-7■■■■■ 28.9
CHAF1A-204ENST00000587368 TDRD9Q8NDG6 1382 aaKnown RBP23.8■■□□□ 1.4
CHAF1A-204ENST00000587368 EIF4G3O43432 1585 aaKnown RBP23.79■■□□□ 1.4
CHAF1A-204ENST00000587368 OSCARQ8IYS5 282 aa23.78■■□□□ 1.4
CHAF1A-204ENST00000587368 TOP2BQ02880 1626 aa23.73■■□□□ 1.39
CHAF1A-204ENST00000587368 WDR97A6NE52 1622 aa23.71■■□□□ 1.39
CHAF1A-204ENST00000587368 SYNJ1O43426 1573 aa23.7■■□□□ 1.38
CHAF1A-204ENST00000587368 BIVM-ERCC5R4GMW8 1640 aa23.7■■□□□ 1.38
CHAF1A-204ENST00000587368 ABCA10Q8WWZ4 1543 aa23.69■■□□□ 1.38
CHAF1A-204ENST00000587368 GRIN2BQ13224 1484 aa23.64■■□□□ 1.38
CHAF1A-204ENST00000587368 GAPVD1Q14C86 1478 aa23.63■■□□□ 1.37
CHAF1A-204ENST00000587368 FBLN2P98095 1184 aa23.63■■□□□ 1.37
CHAF1A-204ENST00000587368 SNAPC4Q5SXM2 1469 aa23.59■■□□□ 1.37
CHAF1A-204ENST00000587368 MAGI1Q96QZ7 1491 aaPredicted RBP23.57■■□□□ 1.36
CHAF1A-204ENST00000587368 CHMP7Q8WUX9 453 aaPredicted RBP23.56■■□□□ 1.36
CHAF1A-204ENST00000587368 ABCA5Q8WWZ7 1642 aa23.54■■□□□ 1.36
CHAF1A-204ENST00000587368 SYNJ2O15056 1496 aa23.49■■□□□ 1.35
CHAF1A-204ENST00000587368 CHD1O14646 1710 aa23.47■■□□□ 1.35
CHAF1A-204ENST00000587368 PBRM1Q86U86 1689 aa23.46■■□□□ 1.35
CHAF1A-204ENST00000587368 ERICH3Q5RHP9 1530 aa23.39■■□□□ 1.34
CHAF1A-204ENST00000587368 FHAD1B1AJZ9 1412 aa23.37■■□□□ 1.33
CHAF1A-204ENST00000587368 KIF27Q86VH2 1401 aa23.37■■□□□ 1.33
CHAF1A-204ENST00000587368 ADAMTS12P58397 1594 aa23.32■■□□□ 1.32
CHAF1A-204ENST00000587368 TRIM41Q8WV44 630 aa23.32■■□□□ 1.32
CHAF1A-204ENST00000587368 GRIN2AQ12879 1464 aa23.31■■□□□ 1.32
CHAF1A-204ENST00000587368 ARHGEF11O15085 1522 aa23.28■■□□□ 1.32
CHAF1A-204ENST00000587368 IGF1RP08069 1367 aa23.28■■□□□ 1.32
CHAF1A-204ENST00000587368 CLASP1Q7Z460 1538 aa23.27■■□□□ 1.32
CHAF1A-204ENST00000587368 RIMBP3CA6NJZ7 1639 aa23.26■■□□□ 1.31
CHAF1A-204ENST00000587368 RIMBP3BA6NNM3 1639 aa23.26■■□□□ 1.31
CHAF1A-204ENST00000587368 RIMBP3Q9UFD9 1639 aa23.26■■□□□ 1.31
CHAF1A-204ENST00000587368 NUP160Q12769 1436 aa23.22■■□□□ 1.31
CHAF1A-204ENST00000587368 CYB5RLQ6IPT4 315 aa23.17■■□□□ 1.3
CHAF1A-204ENST00000587368 CARMIL1Q5VZK9 1371 aa23.15■■□□□ 1.3
CHAF1A-204ENST00000587368 CEP170Q5SW79 1584 aa23.15■■□□□ 1.3
CHAF1A-204ENST00000587368 CUL7Q14999 1698 aa23.13■■□□□ 1.29
CHAF1A-204ENST00000587368 ARAP1Q96P48 1450 aa23.09■■□□□ 1.29
CHAF1A-204ENST00000587368 RUSC2Q8N2Y8 1516 aa23.08■■□□□ 1.29
CHAF1A-204ENST00000587368 JPH4Q96JJ6 628 aa23.06■■□□□ 1.28
CHAF1A-204ENST00000587368 KIAA0586Q9BVV6 1533 aa23■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms