RNA–Protein interactions for RNA: ENST00000587321.1

RFX2-208, Transcript of regulatory factor X2, humanhuman

TSL 3

Gene RFX2, Length 337 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX2-208ENST00000587321 NISCHQ9Y2I1 1504 aa31.85■■■□□ 2.69
RFX2-208ENST00000587321 CCDC180Q9P1Z9 1646 aa28.31■■■□□ 2.12
RFX2-208ENST00000587321 ABCC9O60706 1549 aa27.53■■■□□ 2
RFX2-208ENST00000587321 DCAF8L2P0C7V8 631 aa26.64■■□□□ 1.86
RFX2-208ENST00000587321 RB1CC1Q8TDY2 1594 aa26.61■■□□□ 1.85
RFX2-208ENST00000587321 NACADO15069 1562 aa26.59■■□□□ 1.85
RFX2-208ENST00000587321 ZCCHC6Q5VYS8 1495 aaKnown RBP26.55■■□□□ 1.84
RFX2-208ENST00000587321 MYO15BQ96JP2 1530 aa26.45■■□□□ 1.83
RFX2-208ENST00000587321 DCAF1Q9Y4B6 1507 aa26.38■■□□□ 1.81
RFX2-208ENST00000587321 UNC13AQ9UPW8 1703 aa25.88■■□□□ 1.73
RFX2-208ENST00000587321 SCRIBQ14160 1630 aa25.82■■□□□ 1.72
RFX2-208ENST00000587321 PABPN1Q86U42 306 aaKnown RBP eCLIP25.73■■□□□ 1.71
RFX2-208ENST00000587321 BICRAQ9NZM4 1560 aa25.65■■□□□ 1.7
RFX2-208ENST00000587321 SHROOM4Q9ULL8 1493 aa25.56■■□□□ 1.68
RFX2-208ENST00000587321 EIF4G1Q04637 1599 aaKnown RBP25.05■■□□□ 1.6
RFX2-208ENST00000587321 DNAJC5BQ9UF47 199 aa25■■□□□ 1.59
RFX2-208ENST00000587321 CC2D2AQ9P2K1 1620 aa24.9■■□□□ 1.58
RFX2-208ENST00000587321 CECR2Q9BXF3 1484 aa24.75■■□□□ 1.55
RFX2-208ENST00000587321 BAZ1AQ9NRL2 1556 aaPredicted RBP24.74■■□□□ 1.55
RFX2-208ENST00000587321 SMARCA4P51532 1647 aa24.7■■□□□ 1.54
RFX2-208ENST00000587321 SMARCA2P51531 1590 aa24.56■■□□□ 1.52
RFX2-208ENST00000587321 ATAD2BQ9ULI0 1458 aa24.51■■□□□ 1.51
RFX2-208ENST00000587321 MROH2BQ7Z745 1585 aa24.5■■□□□ 1.51
RFX2-208ENST00000587321 NCAPD3P42695 1498 aa24.48■■□□□ 1.51
RFX2-208ENST00000587321 PEG3Q9GZU2 1588 aa24.44■■□□□ 1.5
RFX2-208ENST00000587321 HMGXB3Q12766 1538 aa24.41■■□□□ 1.5
RFX2-208ENST00000587321 BAZ1BQ9UIG0 1483 aaKnown RBP24.39■■□□□ 1.5
RFX2-208ENST00000587321 RSF1Q96T23 1441 aaPredicted RBP24.29■■□□□ 1.48
RFX2-208ENST00000587321 WIZO95785 1651 aa24.27■■□□□ 1.48
RFX2-208ENST00000587321 TOP2AP11388 1531 aaKnown RBP24.07■■□□□ 1.44
RFX2-208ENST00000587321 LAMC3Q9Y6N6 1575 aa23.87■■□□□ 1.41
RFX2-208ENST00000587321 SUPT5HO00267 1087 aaKnown RBP23.85■■□□□ 1.41
RFX2-208ENST00000587321 ERCC6Q03468 1493 aa23.81■■□□□ 1.4
RFX2-208ENST00000587321 NESP48681 1621 aa23.81■■□□□ 1.4
RFX2-208ENST00000587321 CADPSQ9ULU8 1353 aa23.8■■□□□ 1.4
RFX2-208ENST00000587321 CCDC88BA6NC98 1476 aa23.75■■□□□ 1.39
RFX2-208ENST00000587321 PDS5BQ9NTI5 1447 aa23.74■■□□□ 1.39
RFX2-208ENST00000587321 CFTRP13569 1480 aa23.67■■□□□ 1.38
RFX2-208ENST00000587321 KIF21AQ7Z4S6 1674 aa23.57■■□□□ 1.36
RFX2-208ENST00000587321 PRDM2Q13029 1718 aa23.55■■□□□ 1.36
RFX2-208ENST00000587321 FANCD2Q9BXW9 1451 aa23.55■■□□□ 1.36
RFX2-208ENST00000587321 CEP164Q9UPV0 1460 aa23.53■■□□□ 1.36
RFX2-208ENST00000587321 DNAJC5Q9H3Z4 198 aa23.52■■□□□ 1.36
RFX2-208ENST00000587321 CUX2O14529 1486 aa23.48■■□□□ 1.35
RFX2-208ENST00000587321 THOC2Q8NI27 1593 aaKnown RBP23.45■■□□□ 1.34
RFX2-208ENST00000587321 MRC2Q9UBG0 1479 aa23.45■■□□□ 1.34
RFX2-208ENST00000587321 WDR62O43379 1518 aa23.33■■□□□ 1.33
RFX2-208ENST00000587321 ABCC8Q09428 1581 aa23.26■■□□□ 1.31
RFX2-208ENST00000587321 URB2Q14146 1524 aaKnown RBP23.24■■□□□ 1.31
RFX2-208ENST00000587321 DNMBPQ6XZF7 1577 aa23.18■■□□□ 1.3
RFX2-208ENST00000587321 TOPBP1Q92547 1522 aa23.16■■□□□ 1.3
RFX2-208ENST00000587321 IFT140Q96RY7 1462 aa23.03■■□□□ 1.28
RFX2-208ENST00000587321 CUX1P39880 1505 aa23■■□□□ 1.27
RFX2-208ENST00000587321 WRNQ14191 1432 aaPredicted RBP eCLIP22.98■■□□□ 1.27
RFX2-208ENST00000587321 POLA1P09884 1462 aaPredicted RBP22.96■■□□□ 1.27
RFX2-208ENST00000587321 FGD5Q6ZNL6 1462 aa22.95■■□□□ 1.26
RFX2-208ENST00000587321 SOGA1O94964 1423 aa22.91■■□□□ 1.26
RFX2-208ENST00000587321 TOP2BQ02880 1626 aa22.88■■□□□ 1.25
RFX2-208ENST00000587321 BIVM-ERCC5R4GMW8 1640 aa22.87■■□□□ 1.25
RFX2-208ENST00000587321 TARBP1Q13395 1621 aaKnown RBP22.86■■□□□ 1.25
RFX2-208ENST00000587321 SYNJ1O43426 1573 aa22.84■■□□□ 1.25
RFX2-208ENST00000587321 RAD54L2Q9Y4B4 1467 aa22.84■■□□□ 1.25
RFX2-208ENST00000587321 ZNF608Q9ULD9 1512 aaPredicted RBP22.82■■□□□ 1.24
RFX2-208ENST00000587321 WDR97A6NE52 1622 aa22.8■■□□□ 1.24
RFX2-208ENST00000587321 EIF4G3O43432 1585 aaKnown RBP22.8■■□□□ 1.24
RFX2-208ENST00000587321 ABCA10Q8WWZ4 1543 aa22.73■■□□□ 1.23
RFX2-208ENST00000587321 TDRD9Q8NDG6 1382 aaKnown RBP22.73■■□□□ 1.23
RFX2-208ENST00000587321 AQRO60306 1485 aaKnown RBP eCLIP22.73■■□□□ 1.23
RFX2-208ENST00000587321 GAPVD1Q14C86 1478 aa22.65■■□□□ 1.22
RFX2-208ENST00000587321 GRIN2BQ13224 1484 aa22.64■■□□□ 1.21
RFX2-208ENST00000587321 ABCA5Q8WWZ7 1642 aa22.61■■□□□ 1.21
RFX2-208ENST00000587321 PBRM1Q86U86 1689 aa22.58■■□□□ 1.21
RFX2-208ENST00000587321 MAGI1Q96QZ7 1491 aaPredicted RBP22.58■■□□□ 1.2
RFX2-208ENST00000587321 TRIM41Q8WV44 630 aa22.57■■□□□ 1.2
RFX2-208ENST00000587321 SNAPC4Q5SXM2 1469 aa22.56■■□□□ 1.2
RFX2-208ENST00000587321 FBLN2P98095 1184 aa22.53■■□□□ 1.2
RFX2-208ENST00000587321 OSCARQ8IYS5 282 aa22.53■■□□□ 1.2
RFX2-208ENST00000587321 KIF27Q86VH2 1401 aa22.52■■□□□ 1.2
RFX2-208ENST00000587321 ERICH3Q5RHP9 1530 aa22.49■■□□□ 1.19
RFX2-208ENST00000587321 CHMP7Q8WUX9 453 aaPredicted RBP22.49■■□□□ 1.19
RFX2-208ENST00000587321 SYNJ2O15056 1496 aa22.47■■□□□ 1.19
RFX2-208ENST00000587321 CHD1O14646 1710 aa22.47■■□□□ 1.19
RFX2-208ENST00000587321 ADAMTS12P58397 1594 aa22.41■■□□□ 1.18
RFX2-208ENST00000587321 FHAD1B1AJZ9 1412 aa22.4■■□□□ 1.18
RFX2-208ENST00000587321 CUL7Q14999 1698 aa22.34■■□□□ 1.17
RFX2-208ENST00000587321 GRIN2AQ12879 1464 aa22.33■■□□□ 1.16
RFX2-208ENST00000587321 IGF1RP08069 1367 aa22.31■■□□□ 1.16
RFX2-208ENST00000587321 CHIC1Q5VXU3 224 aa22.28■■□□□ 1.16
RFX2-208ENST00000587321 CARMIL1Q5VZK9 1371 aa22.24■■□□□ 1.15
RFX2-208ENST00000587321 CLASP1Q7Z460 1538 aa22.21■■□□□ 1.15
RFX2-208ENST00000587321 EEA1Q15075 1411 aa22.21■■□□□ 1.15
RFX2-208ENST00000587321 RUSC2Q8N2Y8 1516 aa22.2■■□□□ 1.14
RFX2-208ENST00000587321 NUP160Q12769 1436 aa22.19■■□□□ 1.14
RFX2-208ENST00000587321 CEP170Q5SW79 1584 aa22.16■■□□□ 1.14
RFX2-208ENST00000587321 RAPGEF2Q9Y4G8 1499 aa22.14■■□□□ 1.13
RFX2-208ENST00000587321 ARHGEF11O15085 1522 aa22.11■■□□□ 1.13
RFX2-208ENST00000587321 CSRNP3Q8WYN3 585 aa22.1■■□□□ 1.13
RFX2-208ENST00000587321 RIMBP3CA6NJZ7 1639 aa22.09■■□□□ 1.13
RFX2-208ENST00000587321 RIMBP3BA6NNM3 1639 aa22.09■■□□□ 1.13
RFX2-208ENST00000587321 RIMBP3Q9UFD9 1639 aa22.09■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms