RNA–Protein interactions for RNA: ENST00000587175.1

CACTIN-205, Transcript of cactin, spliceosome C complex subunit, humanhuman

TSL 5

Gene CACTIN, Length 2,216 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACTIN-205ENST00000587175 NISCHQ9Y2I1 1504 aa44.45■■■■■ 4.71
CACTIN-205ENST00000587175 CCDC180Q9P1Z9 1646 aa38.29■■■■□ 3.72
CACTIN-205ENST00000587175 ZCCHC6Q5VYS8 1495 aaKnown RBP37.5■■■■□ 3.59
CACTIN-205ENST00000587175 SHROOM4Q9ULL8 1493 aa37.17■■■■□ 3.54
CACTIN-205ENST00000587175 DCAF8L2P0C7V8 631 aa36.71■■■■□ 3.47
CACTIN-205ENST00000587175 DCAF1Q9Y4B6 1507 aa36.63■■■■□ 3.45
CACTIN-205ENST00000587175 SUPT5HO00267 1087 aaKnown RBP36.22■■■■□ 3.39
CACTIN-205ENST00000587175 MYO15BQ96JP2 1530 aa35.82■■■■□ 3.33
CACTIN-205ENST00000587175 ABCC9O60706 1549 aa35.58■■■■□ 3.29
CACTIN-205ENST00000587175 SCRIBQ14160 1630 aa35.52■■■■□ 3.28
CACTIN-205ENST00000587175 NACADO15069 1562 aa35.45■■■■□ 3.27
CACTIN-205ENST00000587175 CHIC1Q5VXU3 224 aa35.01■■■■□ 3.2
CACTIN-205ENST00000587175 RB1CC1Q8TDY2 1594 aa34.98■■■■□ 3.19
CACTIN-205ENST00000587175 RSF1Q96T23 1441 aaPredicted RBP34.85■■■■□ 3.17
CACTIN-205ENST00000587175 CECR2Q9BXF3 1484 aa34.54■■■■□ 3.12
CACTIN-205ENST00000587175 MROH2BQ7Z745 1585 aa34.43■■■■□ 3.1
CACTIN-205ENST00000587175 UNC13AQ9UPW8 1703 aa34.43■■■■□ 3.1
CACTIN-205ENST00000587175 WIZO95785 1651 aa34.27■■■■□ 3.08
CACTIN-205ENST00000587175 BAZ1AQ9NRL2 1556 aaPredicted RBP34.26■■■■□ 3.07
CACTIN-205ENST00000587175 SMARCA4P51532 1647 aa34.01■■■■□ 3.04
CACTIN-205ENST00000587175 BICRAQ9NZM4 1560 aa33.91■■■■□ 3.02
CACTIN-205ENST00000587175 TRIM41Q8WV44 630 aa33.9■■■■□ 3.02
CACTIN-205ENST00000587175 TOP2AP11388 1531 aaKnown RBP33.82■■■■□ 3.01
CACTIN-205ENST00000587175 LOC105371045A0A1W2PR82 267 aa33.81■■■■□ 3
CACTIN-205ENST00000587175 PABPN1Q86U42 306 aaKnown RBP eCLIP33.78■■■■□ 3
CACTIN-205ENST00000587175 EIF4G1Q04637 1599 aaKnown RBP33.61■■■□□ 2.97
CACTIN-205ENST00000587175 HRCP23327 699 aa33.59■■■□□ 2.97
CACTIN-205ENST00000587175 SMARCA2P51531 1590 aa33.57■■■□□ 2.96
CACTIN-205ENST00000587175 CCDC88BA6NC98 1476 aa33.54■■■□□ 2.96
CACTIN-205ENST00000587175 PEG3Q9GZU2 1588 aa33.45■■■□□ 2.95
CACTIN-205ENST00000587175 FAM9AQ8IZU1 332 aaPredicted RBP33.43■■■□□ 2.94
CACTIN-205ENST00000587175 PCGF6Q9BYE7 350 aa33.38■■■□□ 2.93
CACTIN-205ENST00000587175 ABCC8Q09428 1581 aa33.22■■■□□ 2.91
CACTIN-205ENST00000587175 ATAD2BQ9ULI0 1458 aa33.2■■■□□ 2.9
CACTIN-205ENST00000587175 BAZ1BQ9UIG0 1483 aaKnown RBP33.12■■■□□ 2.89
CACTIN-205ENST00000587175 EHMT2Q96KQ7 1210 aa33.04■■■□□ 2.88
CACTIN-205ENST00000587175 TRIM26Q12899 539 aaPredicted RBP32.94■■■□□ 2.86
CACTIN-205ENST00000587175 WRNQ14191 1432 aaPredicted RBP eCLIP32.82■■■□□ 2.845e-6■■■■■ 54.3
CACTIN-205ENST00000587175 EEA1Q15075 1411 aa32.76■■■□□ 2.84
CACTIN-205ENST00000587175 SOGA1O94964 1423 aa32.75■■■□□ 2.83
CACTIN-205ENST00000587175 HMGXB3Q12766 1538 aa32.75■■■□□ 2.83
CACTIN-205ENST00000587175 PPARGC1BQ86YN6 1023 aaKnown RBP32.71■■■□□ 2.83
CACTIN-205ENST00000587175 NCAPD3P42695 1498 aa32.7■■■□□ 2.82
CACTIN-205ENST00000587175 SYNJ1O43426 1573 aa32.67■■■□□ 2.82
CACTIN-205ENST00000587175 CSRNP3Q8WYN3 585 aa32.59■■■□□ 2.81
CACTIN-205ENST00000587175 RUSC2Q8N2Y8 1516 aa32.58■■■□□ 2.81
CACTIN-205ENST00000587175 TNIKQ9UKE5 1360 aa32.47■■■□□ 2.79
CACTIN-205ENST00000587175 GOLGA3Q08378 1498 aa32.42■■■□□ 2.78
CACTIN-205ENST00000587175 CEP162Q5TB80 1403 aa32.42■■■□□ 2.78
CACTIN-205ENST00000587175 TOP2BQ02880 1626 aa32.42■■■□□ 2.78
CACTIN-205ENST00000587175 UBTFP17480 764 aaKnown RBP32.36■■■□□ 2.77
CACTIN-205ENST00000587175 BIVM-ERCC5R4GMW8 1640 aa32.36■■■□□ 2.77
CACTIN-205ENST00000587175 KIF21BO75037 1637 aa32.33■■■□□ 2.77
CACTIN-205ENST00000587175 CEP164Q9UPV0 1460 aa32.32■■■□□ 2.76
CACTIN-205ENST00000587175 CFTRP13569 1480 aa32.26■■■□□ 2.76
CACTIN-205ENST00000587175 ZEB1P37275 1124 aaPredicted RBP32.24■■■□□ 2.75
CACTIN-205ENST00000587175 PRDM2Q13029 1718 aa32.23■■■□□ 2.75
CACTIN-205ENST00000587175 CC2D2AQ9P2K1 1620 aa32.17■■■□□ 2.74
CACTIN-205ENST00000587175 CUX1P39880 1505 aa32.12■■■□□ 2.73
CACTIN-205ENST00000587175 RAPGEF2Q9Y4G8 1499 aa32.03■■■□□ 2.72
CACTIN-205ENST00000587175 CADPSQ9ULU8 1353 aa31.99■■■□□ 2.71
CACTIN-205ENST00000587175 CLIP1P30622 1438 aa31.96■■■□□ 2.71
CACTIN-205ENST00000587175 ERICH3Q5RHP9 1530 aa31.92■■■□□ 2.7
CACTIN-205ENST00000587175 KIF27Q86VH2 1401 aa31.9■■■□□ 2.7
CACTIN-205ENST00000587175 TTBK1Q5TCY1 1321 aaPredicted RBP31.87■■■□□ 2.69
CACTIN-205ENST00000587175 PRXQ9BXM0 1461 aa31.86■■■□□ 2.69
CACTIN-205ENST00000587175 VPS8Q8N3P4 1428 aa31.78■■■□□ 2.68
CACTIN-205ENST00000587175 RANGAP1P46060 587 aaPredicted RBP31.69■■■□□ 2.66
CACTIN-205ENST00000587175 FANCD2Q9BXW9 1451 aa31.68■■■□□ 2.66
CACTIN-205ENST00000587175 FGD5Q6ZNL6 1462 aa31.65■■■□□ 2.66
CACTIN-205ENST00000587175 CUX2O14529 1486 aa31.65■■■□□ 2.66
CACTIN-205ENST00000587175 APLP2Q06481 763 aa31.63■■■□□ 2.65
CACTIN-205ENST00000587175 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.59■■■□□ 2.65
CACTIN-205ENST00000587175 CCER1Q8TC90 406 aaPredicted RBP31.57■■■□□ 2.65
CACTIN-205ENST00000587175 DNMBPQ6XZF7 1577 aa31.53■■■□□ 2.64
CACTIN-205ENST00000587175 NESP48681 1621 aa31.51■■■□□ 2.64
CACTIN-205ENST00000587175 ARAP1Q96P48 1450 aa31.5■■■□□ 2.63
CACTIN-205ENST00000587175 IGF1RP08069 1367 aa31.49■■■□□ 2.63
CACTIN-205ENST00000587175 LAMC3Q9Y6N6 1575 aa31.49■■■□□ 2.63
CACTIN-205ENST00000587175 TOPBP1Q92547 1522 aa31.43■■■□□ 2.62
CACTIN-205ENST00000587175 CARMIL1Q5VZK9 1371 aa31.39■■■□□ 2.62
CACTIN-205ENST00000587175 POLA1P09884 1462 aaPredicted RBP31.35■■■□□ 2.61
CACTIN-205ENST00000587175 ABCA10Q8WWZ4 1543 aa31.33■■■□□ 2.61
CACTIN-205ENST00000587175 ARHGAP35Q9NRY4 1499 aa31.33■■■□□ 2.61
CACTIN-205ENST00000587175 RAD54L2Q9Y4B4 1467 aa31.32■■■□□ 2.6
CACTIN-205ENST00000587175 PDS5BQ9NTI5 1447 aa31.24■■■□□ 2.59
CACTIN-205ENST00000587175 HNRNPUL2Q1KMD3 747 aaKnown RBP31.22■■■□□ 2.59
CACTIN-205ENST00000587175 URB2Q14146 1524 aaKnown RBP31.22■■■□□ 2.59
CACTIN-205ENST00000587175 CUL7Q14999 1698 aa31.19■■■□□ 2.58
CACTIN-205ENST00000587175 WDR97A6NE52 1622 aa31.17■■■□□ 2.58
CACTIN-205ENST00000587175 KIF21AQ7Z4S6 1674 aa31.15■■■□□ 2.58
CACTIN-205ENST00000587175 DNAJC5BQ9UF47 199 aa31.13■■■□□ 2.57
CACTIN-205ENST00000587175 KANK4Q5T7N3 995 aaPredicted RBP31.12■■■□□ 2.57
CACTIN-205ENST00000587175 CTTNBP2Q8WZ74 1663 aa31.05■■■□□ 2.56
CACTIN-205ENST00000587175 ABCA5Q8WWZ7 1642 aa31.02■■■□□ 2.56
CACTIN-205ENST00000587175 FHAD1B1AJZ9 1412 aa30.98■■■□□ 2.55
CACTIN-205ENST00000587175 MAP3K1Q13233 1512 aa30.98■■■□□ 2.55
CACTIN-205ENST00000587175 TIAM1Q13009 1591 aa30.97■■■□□ 2.55
CACTIN-205ENST00000587175 SCAF1Q9H7N4 1312 aaKnown RBP30.97■■■□□ 2.55
CACTIN-205ENST00000587175 RRBP1Q9P2E9 1410 aaKnown RBP30.95■■■□□ 2.55
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms