RNA–Protein interactions for RNA: ENST00000587165.1

LINC01140-208, Transcript of long intergenic non-protein coding RNA 1140, humanhuman

TSL 3

Gene LINC01140, Length 426 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01140-208ENST00000587165 NISCHQ9Y2I1 1504 aa12.35□□□□□ -0.43
LINC01140-208ENST00000587165 CCDC180Q9P1Z9 1646 aa11□□□□□ -0.65
LINC01140-208ENST00000587165 ABCC9O60706 1549 aa10.86□□□□□ -0.67
LINC01140-208ENST00000587165 RB1CC1Q8TDY2 1594 aa10.43□□□□□ -0.74
LINC01140-208ENST00000587165 DCAF8L2P0C7V8 631 aa10.43□□□□□ -0.74
LINC01140-208ENST00000587165 NACADO15069 1562 aa10.4□□□□□ -0.74
LINC01140-208ENST00000587165 MYO15BQ96JP2 1530 aa10.32□□□□□ -0.76
LINC01140-208ENST00000587165 ZCCHC6Q5VYS8 1495 aaKnown RBP10.29□□□□□ -0.76
LINC01140-208ENST00000587165 DCAF1Q9Y4B6 1507 aa10.23□□□□□ -0.77
LINC01140-208ENST00000587165 PABPN1Q86U42 306 aaKnown RBP eCLIP10.14□□□□□ -0.79
LINC01140-208ENST00000587165 SHROOM4Q9ULL8 1493 aa10.05□□□□□ -0.8
LINC01140-208ENST00000587165 SCRIBQ14160 1630 aa10.04□□□□□ -0.8
LINC01140-208ENST00000587165 UNC13AQ9UPW8 1703 aa10.04□□□□□ -0.8
LINC01140-208ENST00000587165 BICRAQ9NZM4 1560 aa10.03□□□□□ -0.8
LINC01140-208ENST00000587165 DNAJC5BQ9UF47 199 aa9.97□□□□□ -0.81
LINC01140-208ENST00000587165 EIF4G1Q04637 1599 aaKnown RBP9.83□□□□□ -0.84
LINC01140-208ENST00000587165 CECR2Q9BXF3 1484 aa9.79□□□□□ -0.84
LINC01140-208ENST00000587165 CC2D2AQ9P2K1 1620 aa9.78□□□□□ -0.84
LINC01140-208ENST00000587165 BAZ1AQ9NRL2 1556 aaPredicted RBP9.62□□□□□ -0.87
LINC01140-208ENST00000587165 SMARCA2P51531 1590 aa9.6□□□□□ -0.87
LINC01140-208ENST00000587165 SMARCA4P51532 1647 aa9.59□□□□□ -0.87
LINC01140-208ENST00000587165 NCAPD3P42695 1498 aa9.59□□□□□ -0.87
LINC01140-208ENST00000587165 ATAD2BQ9ULI0 1458 aa9.58□□□□□ -0.88
LINC01140-208ENST00000587165 HMGXB3Q12766 1538 aa9.54□□□□□ -0.88
LINC01140-208ENST00000587165 BAZ1BQ9UIG0 1483 aaKnown RBP9.53□□□□□ -0.88
LINC01140-208ENST00000587165 MROH2BQ7Z745 1585 aa9.5□□□□□ -0.89
LINC01140-208ENST00000587165 PEG3Q9GZU2 1588 aa9.5□□□□□ -0.89
LINC01140-208ENST00000587165 ERCC6Q03468 1493 aa9.44□□□□□ -0.9
LINC01140-208ENST00000587165 RSF1Q96T23 1441 aaPredicted RBP9.39□□□□□ -0.91
LINC01140-208ENST00000587165 WIZO95785 1651 aa9.36□□□□□ -0.91
LINC01140-208ENST00000587165 LAMC3Q9Y6N6 1575 aa9.34□□□□□ -0.91
LINC01140-208ENST00000587165 PDS5BQ9NTI5 1447 aa9.34□□□□□ -0.91
LINC01140-208ENST00000587165 NESP48681 1621 aa9.34□□□□□ -0.91
LINC01140-208ENST00000587165 CUX2O14529 1486 aa9.34□□□□□ -0.91
LINC01140-208ENST00000587165 TOP2AP11388 1531 aaKnown RBP9.33□□□□□ -0.92
LINC01140-208ENST00000587165 CADPSQ9ULU8 1353 aa9.33□□□□□ -0.92
LINC01140-208ENST00000587165 CFTRP13569 1480 aa9.24□□□□□ -0.93
LINC01140-208ENST00000587165 CEP164Q9UPV0 1460 aa9.23□□□□□ -0.93
LINC01140-208ENST00000587165 MRC2Q9UBG0 1479 aa9.22□□□□□ -0.93
LINC01140-208ENST00000587165 FANCD2Q9BXW9 1451 aa9.21□□□□□ -0.93
LINC01140-208ENST00000587165 THOC2Q8NI27 1593 aaKnown RBP9.21□□□□□ -0.93
LINC01140-208ENST00000587165 CCDC88BA6NC98 1476 aa9.2□□□□□ -0.94
LINC01140-208ENST00000587165 KIF21AQ7Z4S6 1674 aa9.2□□□□□ -0.94
LINC01140-208ENST00000587165 WDR62O43379 1518 aa9.16□□□□□ -0.94
LINC01140-208ENST00000587165 SUPT5HO00267 1087 aaKnown RBP9.15□□□□□ -0.94
LINC01140-208ENST00000587165 DNAJC5Q9H3Z4 198 aa9.11□□□□□ -0.95
LINC01140-208ENST00000587165 URB2Q14146 1524 aaKnown RBP9.09□□□□□ -0.95
LINC01140-208ENST00000587165 PRDM2Q13029 1718 aa9.08□□□□□ -0.96
LINC01140-208ENST00000587165 ABCC8Q09428 1581 aa9.08□□□□□ -0.96
LINC01140-208ENST00000587165 IFT140Q96RY7 1462 aa9.05□□□□□ -0.96
LINC01140-208ENST00000587165 TOPBP1Q92547 1522 aa9.05□□□□□ -0.96
LINC01140-208ENST00000587165 DNMBPQ6XZF7 1577 aa9.03□□□□□ -0.96
LINC01140-208ENST00000587165 POLA1P09884 1462 aaPredicted RBP8.96□□□□□ -0.97
LINC01140-208ENST00000587165 OSCARQ8IYS5 282 aa8.95□□□□□ -0.98
LINC01140-208ENST00000587165 SOGA1O94964 1423 aa8.95□□□□□ -0.98
LINC01140-208ENST00000587165 ZNF608Q9ULD9 1512 aaPredicted RBP8.95□□□□□ -0.98
LINC01140-208ENST00000587165 FGD5Q6ZNL6 1462 aa8.94□□□□□ -0.98
LINC01140-208ENST00000587165 CUX1P39880 1505 aa8.92□□□□□ -0.98
LINC01140-208ENST00000587165 EIF4G3O43432 1585 aaKnown RBP8.91□□□□□ -0.98
LINC01140-208ENST00000587165 RAD54L2Q9Y4B4 1467 aa8.91□□□□□ -0.98
LINC01140-208ENST00000587165 AQRO60306 1485 aaKnown RBP eCLIP8.9□□□□□ -0.98
LINC01140-208ENST00000587165 WRNQ14191 1432 aaPredicted RBP eCLIP8.9□□□□□ -0.98
LINC01140-208ENST00000587165 WDR97A6NE52 1622 aa8.9□□□□□ -0.99
LINC01140-208ENST00000587165 TARBP1Q13395 1621 aaKnown RBP8.9□□□□□ -0.99
LINC01140-208ENST00000587165 TDRD9Q8NDG6 1382 aaKnown RBP8.89□□□□□ -0.99
LINC01140-208ENST00000587165 FBLN2P98095 1184 aa8.89□□□□□ -0.99
LINC01140-208ENST00000587165 GRIN2BQ13224 1484 aa8.87□□□□□ -0.99
LINC01140-208ENST00000587165 ABCA10Q8WWZ4 1543 aa8.85□□□□□ -0.99
LINC01140-208ENST00000587165 MAGI1Q96QZ7 1491 aaPredicted RBP8.85□□□□□ -0.99
LINC01140-208ENST00000587165 CHMP7Q8WUX9 453 aaPredicted RBP8.85□□□□□ -0.99
LINC01140-208ENST00000587165 GAPVD1Q14C86 1478 aa8.84□□□□□ -0.99
LINC01140-208ENST00000587165 SNAPC4Q5SXM2 1469 aa8.84□□□□□ -0.99
LINC01140-208ENST00000587165 TOP2BQ02880 1626 aa8.83□□□□□ -1
LINC01140-208ENST00000587165 BIVM-ERCC5R4GMW8 1640 aa8.81□□□□□ -1
LINC01140-208ENST00000587165 TRIM41Q8WV44 630 aa8.81□□□□□ -1
LINC01140-208ENST00000587165 SYNJ2O15056 1496 aa8.81□□□□□ -1
LINC01140-208ENST00000587165 SYNJ1O43426 1573 aa8.81□□□□□ -1
LINC01140-208ENST00000587165 ABCA5Q8WWZ7 1642 aa8.78□□□□□ -1
LINC01140-208ENST00000587165 CHD1O14646 1710 aa8.77□□□□□ -1
LINC01140-208ENST00000587165 ARHGEF11O15085 1522 aa8.76□□□□□ -1.01
LINC01140-208ENST00000587165 FHAD1B1AJZ9 1412 aa8.76□□□□□ -1.01
LINC01140-208ENST00000587165 PBRM1Q86U86 1689 aa8.75□□□□□ -1.01
LINC01140-208ENST00000587165 ERICH3Q5RHP9 1530 aa8.75□□□□□ -1.01
LINC01140-208ENST00000587165 KIF27Q86VH2 1401 aa8.74□□□□□ -1.01
LINC01140-208ENST00000587165 RIMBP3CA6NJZ7 1639 aa8.73□□□□□ -1.01
LINC01140-208ENST00000587165 RIMBP3BA6NNM3 1639 aa8.73□□□□□ -1.01
LINC01140-208ENST00000587165 RIMBP3Q9UFD9 1639 aa8.73□□□□□ -1.01
LINC01140-208ENST00000587165 GRIN2AQ12879 1464 aa8.73□□□□□ -1.01
LINC01140-208ENST00000587165 ADAMTS12P58397 1594 aa8.73□□□□□ -1.01
LINC01140-208ENST00000587165 CLASP1Q7Z460 1538 aa8.71□□□□□ -1.01
LINC01140-208ENST00000587165 CYB5RLQ6IPT4 315 aa8.71□□□□□ -1.02
LINC01140-208ENST00000587165 NUP160Q12769 1436 aa8.69□□□□□ -1.02
LINC01140-208ENST00000587165 ARAP1Q96P48 1450 aa8.68□□□□□ -1.02
LINC01140-208ENST00000587165 IGF1RP08069 1367 aa8.66□□□□□ -1.02
LINC01140-208ENST00000587165 CUL7Q14999 1698 aa8.65□□□□□ -1.03
LINC01140-208ENST00000587165 CARMIL1Q5VZK9 1371 aa8.64□□□□□ -1.03
LINC01140-208ENST00000587165 CEP170Q5SW79 1584 aa8.64□□□□□ -1.03
LINC01140-208ENST00000587165 JPH4Q96JJ6 628 aa8.62□□□□□ -1.03
LINC01140-208ENST00000587165 PRG4Q92954 1404 aaPredicted RBP8.61□□□□□ -1.03
LINC01140-208ENST00000587165 KIAA0586Q9BVV6 1533 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms